Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G077600 Populus trichocarpa HOM05D001656 ORTHO05D005043 0.0e+00 1119.0 556 100.0
Sabra19G0088700 Salix brachista HOM05D001656 ORTHO05D005043 3.8e-312 1074.3 556 96.0
Manes.18G053600 Manihot esculenta HOM05D001656 ORTHO05D005043 3.1e-280 968.0 556 84.4
Cpa.g.sc160.9 Carica papaya HOM05D001656 ORTHO05D005043 6.5e-278 960.3 552 83.5
Thecc.08G080000 Theobroma cacao HOM05D001656 ORTHO05D005043 2.7e-276 954.9 556 83.5
QL12p040536 Quercus lobata HOM05D001656 ORTHO05D005043 5.9e-271 937.2 554 81.9
COL.COLO4_35356 Corchorus olitorius HOM05D001656 ORTHO05D005043 1.3e-270 936.0 564 81.2
Duzib041G0753 Durio zibethinus HOM05D001656 ORTHO05D005043 1.4e-269 932.6 554 81.8
Gohir.D05G217900 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.4e-269 932.6 554 81.8
Ciclev10000739m.g Citrus clementina HOM05D001656 ORTHO05D005043 5.5e-269 930.6 555 81.3
Gorai.009G224700 Gossypium raimondii HOM05D001656 ORTHO05D005043 7.2e-269 930.2 554 81.6
Gohir.A05G214600 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.6e-268 929.1 554 81.6
GSVIVG01009259001 Vitis vinifera HOM05D001656 ORTHO05D005043 4.6e-268 927.5 555 81.1
Cfa020711 Carpinus fangiana HOM05D001656 ORTHO05D005043 3.0e-267 924.9 556 80.9
Duzib093G1672 Durio zibethinus HOM05D001656 ORTHO05D005043 1.3e-265 919.5 543 82.0
Haze_19016 Corylus avellana HOM05D001656 ORTHO05D005043 1.7e-265 919.1 556 80.8
Actinidia19273 Actinidia chinensis HOM05D001656 ORTHO05D005043 2.4e-264 915.2 553 81.0
Lalb_Chr11g0064681 Lupinus albus HOM05D001656 ORTHO05D005043 4.1e-264 914.4 553 79.2
Atru.chr13.919 Acer truncatum HOM05D001656 ORTHO05D005043 9.1e-264 913.3 555 80.2
Eucgr.F00471 Eucalyptus grandis HOM05D001656 ORTHO05D005043 9.1e-264 913.3 552 79.3
Sed0025136 Sechium edule HOM05D001656 ORTHO05D005043 9.1e-264 913.3 556 79.9
TAR381G0234 Trochodendron aralioides HOM05D001656 ORTHO05D005043 2.0e-263 912.1 553 79.0
Glyma.04G088400 Glycine max HOM05D001656 ORTHO05D005043 5.9e-263 910.6 554 79.4
arahy.Tifrunner.gnm1.ann1.AQ9I9J Arachis hypogaea HOM05D001656 ORTHO05D005043 2.2e-262 908.7 553 78.7
MBI16_g26737_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 2.2e-262 908.7 553 78.8
arahy.Tifrunner.gnm1.ann1.UN376R Arachis hypogaea HOM05D001656 ORTHO05D005043 2.9e-262 908.3 553 78.7
Actinidia10250 Actinidia chinensis HOM05D001656 ORTHO05D005043 8.5e-262 906.7 553 79.9
CAN.G1801.4 Capsicum annuum HOM05D001656 ORTHO05D005043 8.5e-262 906.7 553 77.9
CANSAT25G3831 Cannabis sativa HOM05D001656 ORTHO05D005043 1.1e-261 906.4 553 79.9
CsaV3_6G036230 Cucumis sativus L. HOM05D001656 ORTHO05D005043 2.5e-261 905.2 556 79.5
Lj1g0025512 Lotus japonicus HOM05D001656 ORTHO05D005043 7.2e-261 903.7 555 78.9
Cc10_g08000 Coffea canephora HOM05D001656 ORTHO05D005043 2.1e-260 902.1 553 78.1
Lsat_1_v5_gn_2_121140 Lactuca sativa HOM05D001656 ORTHO05D005043 7.9e-260 900.2 557 77.9
TPR.G12406 Trifolium pratense HOM05D001656 ORTHO05D005043 1.8e-259 899.0 556 78.1
Ca_15555_v3 Cicer arietinum L. HOM05D001656 ORTHO05D005043 3.0e-259 898.3 556 77.9
Medtr3g110710 Medicago truncatula HOM05D001656 ORTHO05D005043 3.9e-259 897.9 555 78.0
SalBow7G3472 Salvia bowleyana HOM05D001656 ORTHO05D005043 8.8e-259 896.7 553 77.0
Solyc04g077040.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 8.8e-259 896.7 554 77.1
CiPaw.15G153300 Carya illinoinensis HOM05D001656 ORTHO05D005043 1.5e-258 896.0 553 78.1
PGR083G1861 Punica granatum HOM05D001656 ORTHO05D005043 1.5e-258 896.0 554 78.2
TWI56G0239 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 1.5e-258 896.0 553 77.4
PSO447G0306 Papaver somniferum HOM05D001656 ORTHO05D005043 2.0e-258 895.6 553 78.5
PGSC0003DMG400004938 Solanum tuberosum HOM05D001656 ORTHO05D005043 2.6e-258 895.2 553 76.9
Nitab4.5_0006011g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 5.7e-258 894.0 568 76.1
Phvul.009G114000 Phaseolus vulgaris HOM05D001656 ORTHO05D005043 4.8e-257 891.0 557 77.6
THA.LOC104799841 Tarenaya hassleriana HOM05D001656 ORTHO05D005043 4.8e-257 891.0 551 77.9
vmacro21383 Vaccinium macrocarpon HOM05D001656 ORTHO05D005043 6.3e-257 890.6 553 77.9
Lj4C747T6 Lonicera japonica HOM05D001656 ORTHO05D005043 1.8e-256 889.0 572 75.3
VMungo1309G0971 Vigna mungo HOM05D001656 ORTHO05D005043 4.1e-256 887.9 556 77.0
DCAR_020038 Daucus carota HOM05D001656 ORTHO05D005043 1.6e-255 885.9 551 78.0
Nitab4.5_0003791g0030 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.0e-255 885.6 554 76.5
Aqoxy5G02659 Aquilegia oxysepala HOM05D001656 ORTHO05D005043 7.7e-255 883.6 553 77.2
Rhsim06G0067500 Rhododendron simsii HOM05D001656 ORTHO05D005043 6.5e-254 880.6 548 77.9
MSTRG.915 Avicennia marina HOM05D001656 ORTHO05D005043 1.5e-253 879.4 553 75.6
Nn6g32050 Nelumbo nucifera HOM05D001656 ORTHO05D005043 1.9e-253 879.0 553 77.4
TWI36G0349 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 1.9e-253 879.0 553 77.2
ClCG08G008920 Citrullus lanatus HOM05D001656 ORTHO05D005043 4.2e-253 877.9 554 78.3
Hma1.2p1_1078F.1_g254805 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 5.5e-253 877.5 553 76.5
Migut.C00423 Erythranthe guttata HOM05D001656 ORTHO05D005043 4.7e-252 874.4 553 76.3
Ah.11g038980 Amaranthus hybridus HOM05D001656 ORTHO05D005043 6.1e-252 874.0 553 75.8
AUR62034954 Chenopodium quinoa HOM05D001656 ORTHO05D005043 5.2e-251 870.9 553 76.9
Dinv22032 Davidia involucrata HOM05D001656 ORTHO05D005043 2.0e-250 869.0 521 81.0
Lj4A79T57 Lonicera japonica HOM05D001656 ORTHO05D005043 3.3e-250 868.2 553 75.4
Sopen00g004570 Solanum pennellii HOM05D001656 ORTHO05D005043 7.5e-250 867.1 533 77.3
AL8G23490 Arabidopsis lyrata HOM05D001656 ORTHO05D005043 3.7e-249 864.8 553 75.0
Carub.0008s0951 Capsella rubella HOM05D001656 ORTHO05D005043 4.8e-249 864.4 553 75.0
SpUn0011_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.1e-248 863.2 553 74.9
SpUn0057_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.1e-248 863.2 553 74.9
SpUn0134_0020 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.1e-248 863.2 553 74.9
AUR62035764 Chenopodium quinoa HOM05D001656 ORTHO05D005043 5.3e-248 860.9 553 75.8
AT5G49650 Arabidopsis thaliana HOM05D001656 ORTHO05D005043 2.0e-247 859.0 553 74.7
FvH4_5g33550 Fragaria vesca HOM05D001656 ORTHO05D005043 1.1e-245 853.2 554 74.9
Os07g0640200 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 1.5e-245 852.8 559 73.9
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 2.5e-245 852.0 537 76.4
CAN.G1801.5 Capsicum annuum HOM05D001656 ORTHO05D005043 3.2e-245 851.7 555 73.7
Solyc04g077030.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 5.5e-245 850.9 571 72.9
Peaxi162Scf01174g00119 Petunia axillaris HOM05D001656 ORTHO05D005043 7.2e-245 850.5 514 78.8
Oeu035948.1 Olea europaea HOM05D001656 ORTHO05D005043 1.2e-244 849.7 553 74.5
Cc10_g08010 Coffea canephora HOM05D001656 ORTHO05D005043 1.6e-244 849.4 560 74.1
MSTRG.914 Avicennia marina HOM05D001656 ORTHO05D005043 6.1e-244 847.4 553 73.6
Aa31LG3G8940 Aethionema arabicum HOM05D001656 ORTHO05D005043 8.0e-244 847.0 561 74.2
BcaC01g01862 Brassica carinata HOM05D001656 ORTHO05D005043 8.0e-244 847.0 553 73.8
DCAR_009544 Daucus carota HOM05D001656 ORTHO05D005043 8.0e-244 847.0 556 74.6
Prupe.1G542700 Prunus persica HOM05D001656 ORTHO05D005043 8.0e-244 847.0 554 75.1
Thhalv10013140m.g Eutrema salsugineum HOM05D001656 ORTHO05D005043 1.0e-243 846.7 553 73.4
Zm00001eb109880 Zea mays HOM05D001656 ORTHO05D005043 1.4e-243 846.3 557 73.2
HanXRQChr02g0046991 Helianthus annuus HOM05D001656 ORTHO05D005043 3.0e-243 845.1 538 75.3
ATR0315G023 Amborella trichopoda HOM05D001656 ORTHO05D005043 6.8e-243 844.0 548 73.9
BcaB01g00958 Brassica carinata HOM05D001656 ORTHO05D005043 8.8e-243 843.6 554 73.6
MD15G1398600 Malus domestica HOM05D001656 ORTHO05D005043 8.8e-243 843.6 554 74.5
Nitab4.5_0010814g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.6e-242 842.0 580 71.2
BolC3t19406H Brassica oleracea HOM05D001656 ORTHO05D005043 1.7e-241 839.3 559 73.0
RcHm_v2.0_Chr7g0232371 Rosa chinensis HOM05D001656 ORTHO05D005043 3.7e-241 838.2 554 73.8
Sopen00g003720 Solanum pennellii HOM05D001656 ORTHO05D005043 3.7e-241 838.2 542 74.5
A06p20550 Brassica napus HOM05D001656 ORTHO05D005043 8.3e-241 837.0 559 72.8
CDE02G2348 Ceratophyllum demersum HOM05D001656 ORTHO05D005043 4.1e-240 834.7 552 73.0
C03p71250 Brassica napus HOM05D001656 ORTHO05D005043 7.0e-240 833.9 571 71.3
Oeu046408.1 Olea europaea HOM05D001656 ORTHO05D005043 1.2e-239 833.2 528 76.7
Manes.05G186400 Manihot esculenta HOM05D001656 ORTHO05D005043 2.7e-239 832.0 488 83.0
FvH4_5g33570 Fragaria vesca HOM05D001656 ORTHO05D005043 4.7e-236 821.2 555 72.6
Hund05241 Selenicereus undatus HOM05D001656 ORTHO05D005043 2.3e-235 818.9 596 69.5
MD08G1210700 Malus domestica HOM05D001656 ORTHO05D005043 2.6e-234 815.5 554 72.2
MELO3C019781.2 Cucumis melo HOM05D001656 ORTHO05D005043 2.2e-233 812.4 561 73.1
RcHm_v2.0_Chr7g0232401 Rosa chinensis HOM05D001656 ORTHO05D005043 1.4e-232 809.7 540 73.5
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 3.5e-231 805.1 563 70.3
ECA232G0787 Erigeron canadensis HOM05D001656 ORTHO05D005043 4.5e-231 804.7 553 71.2
Hund05240 Selenicereus undatus HOM05D001656 ORTHO05D005043 9.5e-229 797.0 553 71.1
RcHm_v2.0_Chr7g0232391 Rosa chinensis HOM05D001656 ORTHO05D005043 1.0e-227 793.5 558 69.9
Nitab4.5_0003791g0040 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.6e-226 788.9 596 66.8
PSO210G2052 Papaver somniferum HOM05D001656 ORTHO05D005043 2.6e-226 788.9 488 78.1
EL10Ac1g02312 Beta vulgaris HOM05D001656 ORTHO05D005043 5.7e-226 787.7 546 69.6
SEGI_21864 Sequoiadendron giganteum HOM05D001656 ORTHO05D005043 4.9e-225 784.6 553 68.9
EL10Ac1g02313 Beta vulgaris HOM05D001656 ORTHO05D005043 7.8e-223 777.3 553 70.9
FAN18G4580 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.1e-221 773.5 560 69.5
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 5.6e-221 771.2 542 71.2
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 5.0e-214 748.0 543 69.4
Os12g0633000 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 1.5e-213 746.5 558 65.6
Nn5g30719 Nelumbo nucifera HOM05D001656 ORTHO05D005043 9.5e-213 743.8 443 79.9
Pp3c13_15890 Physcomitrium patens HOM05D001656 ORTHO05D005043 4.0e-211 738.4 556 63.3
FAN08G2664 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.4e-195 686.8 559 63.5
Mapoly0152s0012 Marchantia polymorpha HOM05D001656 ORTHO05D005043 2.4e-187 659.4 543 59.9
Pp3c4_10480 Physcomitrium patens HOM05D001656 ORTHO05D005043 3.5e-183 645.6 550 56.2
Sc26g0004310 Simmondsia chinensis HOM05D001656 ORTHO05D005043 6.0e-183 644.8 386 79.8
MBI16_g05037_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 2.3e-182 642.9 431 73.3
Psat5g091440 Pisum sativum HOM05D001656 ORTHO05D005043 1.5e-181 640.2 387 79.1
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 2.6e-170 602.8 551 55.7
SMO339G0045 Selaginella moellendorffii HOM05D001656 ORTHO05D005043 5.8e-170 601.7 562 56.4
Sc08g0003410 Simmondsia chinensis HOM05D001656 ORTHO05D005043 3.8e-169 599.0 386 75.9
Dinv44906 Davidia involucrata HOM05D001656 ORTHO05D005043 1.9e-160 570.1 322 84.8
Pp3c4_10497 Physcomitrium patens HOM05D001656 ORTHO05D005043 3.6e-159 565.8 486 56.0
Hma1.2p1_1281F.1_g272610 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 2.1e-143 513.5 290 82.1
CARHR293240 Cardamine hirsuta HOM05D001656 ORTHO05D005043 2.9e-137 493.0 320 72.2
FAN04G1176 Fragaria x ananassa HOM05D001656 ORTHO05D005043 4.2e-136 489.2 336 70.5
Oeu034830.1 Olea europaea HOM05D001656 ORTHO05D005043 7.2e-136 488.4 304 79.9
unitig_736.g22951 Utricularia gibba HOM05D001656 ORTHO05D005043 7.2e-128 461.8 321 67.6
Oeu035949.1 Olea europaea HOM05D001656 ORTHO05D005043 2.3e-118 430.3 268 76.9
AUR62034953 Chenopodium quinoa HOM05D001656 ORTHO05D005043 1.8e-115 420.6 287 71.1
HPP92_028451 Vanilla planifolia HOM05D001656 ORTHO05D005043 2.3e-113 413.7 273 72.9
SpUn0078_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 6.2e-103 379.0 243 76.1
Oeu011631.2 Olea europaea HOM05D001656 ORTHO05D005043 2.7e-98 363.6 235 77.9
HPP92_019867 Vanilla planifolia HOM05D001656 ORTHO05D005043 1.7e-97 360.9 256 71.5
Glyma.06G090401 Glycine max HOM05D001656 ORTHO05D005043 3.3e-88 330.1 240 68.8
CBR_g40751 Chara braunii HOM05D001656 ORTHO05D005043 7.3e-80 302.4 263 58.9
Gorai.010G169800 Gossypium raimondii HOM05D001656 ORTHO05D005043 9.6e-56 222.2 138 79.7
Gohir.D06G145701 Gossypium hirsutum HOM05D001656 ORTHO05D005043 6.2e-55 219.5 137 78.8
Gohir.D13G037000 Gossypium hirsutum HOM05D001656 ORTHO05D005043 3.1e-54 217.2 139 77.7
Gorai.013G041400 Gossypium raimondii HOM05D001656 ORTHO05D005043 5.3e-54 216.5 139 77.0
unitig_736.g22950 Utricularia gibba HOM05D001656 ORTHO05D005043 1.3e-52 211.8 140 73.6
Atru.chr7.541 Acer truncatum HOM05D001656 ORTHO05D005043 6.5e-52 209.5 192 57.3
Gorai.010G172000 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.3e-47 195.3 128 76.6
Dinv26408 Davidia involucrata HOM05D001656 ORTHO05D005043 5.9e-37 159.8 98 79.6
Dinv14696 Davidia involucrata HOM05D001656 ORTHO05D005043 2.1e-34 151.4 98 75.5
Atru.chr13.2595 Acer truncatum HOM05D001656 ORTHO05D005043 7.2e-27 126.3 107 60.7
Cc01_g04230 Coffea canephora HOM05D001656 ORTHO05D005043 3.1e-22 110.9 62 77.4
Cc04_g15120 Coffea canephora HOM05D001656 ORTHO05D005043 4.1e-22 110.5 62 77.4
Cc11_g07750 Coffea canephora HOM05D001656 ORTHO05D005043 2.0e-21 108.2 70 67.1
Cc02_g27750 Coffea canephora HOM05D001656 ORTHO05D005043 1.0e-20 105.9 62 74.2
HanXRQChr08g0210401 Helianthus annuus HOM05D001656 ORTHO05D005043 2.5e-19 101.3 57 71.9
Gorai.004G152700 Gossypium raimondii HOM05D001656 ORTHO05D005043 5.5e-19 100.1 68 70.6
Gohir.D08G147150 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.6e-18 98.6 68 69.1
MCO10G102 Micromonas commoda HOM05D001656 ORTHO05D014814 2.1e-18 98.2 500 24.4
Cre07.g321100 Chlamydomonas reinhardtii HOM05D001656 ORTHO05D014814 1.2e-16 92.4 491 25.1
CBR_g50937 Chara braunii HOM05D001656 ORTHO05D005043 2.0e-16 91.7 245 26.9
ECA247G1681 Erigeron canadensis HOM05D000257 ORTHO05D008527 1.3e-15 89.0 73 58.9
Cc08_g09760 Coffea canephora HOM05D001656 ORTHO05D005043 1.1e-14 85.9 54 72.2
PRCOL_00006907 Prasinoderma coloniale HOM05D013921 ORTHO05D014814 2.7e-13 81.3 527 24.1
RcHm_v2.0_Chr2g0168121 Rosa chinensis HOM05D004344 ORTHO05D021344 3.6e-10 70.9 54 55.6
FvH4_5g33600 Fragaria vesca HOM05D001656 ORTHO05D005043 6.3e-07 60.1 49 59.2
FAN18G3130 Fragaria x ananassa HOM05D001656 ORTHO05D005043 6.3e-07 60.1 49 59.2
Thecc.03G047200 Theobroma cacao HOM05D000075 ORTHO05D408647 4.1e-06 57.4 76 52.6


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