Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 3.9e-62 241.5 140 100.0
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 5.6e-61 237.7 140 97.9
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 6.8e-51 204.1 141 85.8
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.0e-50 202.6 140 85.7
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 5.8e-50 201.1 142 85.9
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 1.3e-49 199.9 142 84.5
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 2.9e-49 198.7 136 86.8
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 6.4e-49 197.6 140 85.7
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.4e-48 196.4 140 85.0
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 2.4e-48 195.7 142 83.1
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 3.2e-48 195.3 140 83.6
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 3.5e-47 191.8 140 82.9
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 7.8e-47 190.7 140 80.7
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 7.8e-47 190.7 143 82.5
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 2.3e-46 189.1 140 80.0
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 2.3e-46 189.1 141 78.0
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 5.1e-46 188.0 140 80.0
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 2.1e-44 182.6 140 70.0
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 4.7e-44 181.4 136 83.1
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 6.2e-44 181.0 144 77.8
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 1.8e-43 179.5 140 65.0
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 3.1e-43 178.7 140 68.6
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 3.1e-43 178.7 140 68.6
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 5.2e-43 177.9 140 68.6
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 5.2e-43 177.9 136 81.6
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 8.9e-43 177.2 143 69.2
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 8.9e-43 177.2 143 69.2
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 2.6e-42 175.6 140 76.4
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 2.6e-42 175.6 144 77.8
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 2.6e-42 175.6 138 65.9
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 4.4e-42 174.9 140 64.3
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 7.6e-42 174.1 139 65.5
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 7.6e-42 174.1 136 75.7
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 1.3e-41 173.3 140 76.4
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 1.3e-41 173.3 141 66.7
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 2.2e-41 172.6 143 75.5
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 2.2e-41 172.6 143 65.0
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 2.9e-41 172.2 136 64.7
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 4.9e-41 171.4 139 64.7
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 6.4e-41 171.0 137 65.0
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 8.4e-41 170.6 144 75.0
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.4e-40 169.9 142 73.9
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 1.4e-40 169.9 142 64.1
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.4e-40 169.9 142 64.1
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 1.4e-40 169.9 141 77.3
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 1.9e-40 169.5 136 69.1
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.9e-40 169.5 142 64.1
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 2.4e-40 169.1 144 63.9
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 5.4e-40 167.9 142 64.8
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 7.1e-40 167.5 138 73.9
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 7.1e-40 167.5 140 72.1
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 9.3e-40 167.2 142 63.4
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 9.3e-40 167.2 137 70.8
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.2e-39 166.8 144 75.0
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 1.2e-39 166.8 139 72.7
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 1.6e-39 166.4 144 73.6
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 2.1e-39 166.0 139 75.5
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 2.7e-39 165.6 135 63.7
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 2.7e-39 165.6 137 75.9
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 2.7e-39 165.6 138 62.3
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 3.5e-39 165.2 137 65.0
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 3.5e-39 165.2 137 65.0
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 4.6e-39 164.9 137 75.9
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 4.6e-39 164.9 136 65.4
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 6.0e-39 164.5 136 65.4
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 7.8e-39 164.1 136 74.3
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 7.8e-39 164.1 138 76.8
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 1.0e-38 163.7 136 65.4
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 1.0e-38 163.7 138 73.2
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 1.3e-38 163.3 140 75.7
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 1.7e-38 162.9 136 69.1
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 1.7e-38 162.9 140 71.4
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 5.1e-38 161.4 136 76.5
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 5.1e-38 161.4 138 71.7
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 1.1e-37 160.2 136 75.0
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 1.1e-37 160.2 138 62.3
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 1.5e-37 159.8 139 74.1
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 4.3e-37 158.3 141 61.7
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 7.3e-37 157.5 142 57.7
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 7.3e-37 157.5 136 71.3
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 1.3e-36 156.8 139 74.8
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 1.6e-36 156.4 146 59.6
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 2.1e-36 156.0 142 59.9
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 2.8e-36 155.6 138 60.9
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 4.8e-36 154.8 136 72.8
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 3.1e-35 152.1 115 83.5
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 6.9e-35 151.0 115 72.2
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 2.6e-34 149.1 142 57.7
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 9.9e-34 147.1 157 53.5
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 1.6e-31 139.8 140 57.9
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 8.1e-28 127.5 99 82.8
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 2.4e-27 125.9 111 74.8
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 9.9e-26 120.6 132 52.3
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 1.2e-23 113.6 140 48.6
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 3.5e-23 112.1 120 52.5
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 3.5e-23 112.1 119 63.0
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 2.3e-22 109.4 99 62.6
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.1e-22 108.2 150 48.0
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 3.3e-21 105.5 147 47.6
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 9.6e-21 104.0 116 62.1
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.6e-20 103.2 140 46.4
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 6.2e-20 101.3 130 41.5
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 3.1e-19 99.0 77 64.9
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 4.0e-19 98.6 77 64.9
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 5.8e-18 94.7 111 46.8
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 1.0e-17 94.0 77 59.7
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 1.7e-17 93.2 117 41.0
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 2.2e-17 92.8 124 37.1
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 4.9e-17 91.7 73 63.0
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 1.6e-15 86.7 129 38.0
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 3.0e-14 82.4 69 62.3
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 8.7e-14 80.9 89 50.6
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 9.6e-13 77.4 70 58.6
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 4.8e-12 75.1 45 77.8
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 6.9e-11 71.2 75 52.0
Zm00001eb223600 Zea mays HOM05D002538 ORTHO05D008191 1.3e-09 67.0 75 52.0
Zm00001eb351370 Zea mays HOM05D002538 ORTHO05D003162 3.8e-09 65.5 79 48.1
Zm00001eb166970 Zea mays HOM05D002538 ORTHO05D003162 8.5e-09 64.3 79 48.1
Zm00001eb359390 Zea mays HOM05D006738 ORTHO05D008191 1.9e-08 63.2 82 47.6
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.2e-07 60.5 66 53.0


User provided reference genes

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