Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 7.0e-167 590.5 290 100.0
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 4.9e-152 541.2 312 87.2
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.1e-116 423.7 288 75.7
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 4.3e-116 421.8 290 74.5
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.7e-112 409.8 267 75.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.7e-112 409.8 238 85.3
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 4.9e-112 408.3 234 83.8
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.5e-112 407.9 254 79.9
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 8.4e-112 407.5 267 77.5
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.4e-111 406.8 275 73.8
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.5e-111 406.0 248 81.5
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 4.2e-111 405.2 249 78.7
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.2e-110 403.7 253 79.8
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 2.7e-110 402.5 267 75.7
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.7e-110 402.5 234 82.5
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 4.6e-110 401.7 230 85.2
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.0e-109 400.6 282 73.4
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 3.0e-109 399.1 309 67.3
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 5.1e-109 398.3 236 80.9
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.1e-108 397.1 292 70.2
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.5e-108 396.7 299 69.6
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.9e-108 396.4 293 71.7
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.9e-108 396.4 257 76.7
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.5e-108 396.0 268 76.1
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.3e-108 395.6 234 81.6
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.3e-108 395.2 235 82.6
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 9.6e-108 394.0 272 73.9
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.3e-107 393.7 244 77.5
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.6e-107 393.3 291 69.1
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 2.1e-107 392.9 235 80.4
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 2.1e-107 392.9 254 77.2
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.7e-107 392.1 293 69.3
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.8e-107 391.7 294 69.7
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.8e-106 389.8 256 76.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 3.1e-106 389.0 335 63.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 4.1e-106 388.7 278 71.9
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 4.1e-106 388.7 279 71.7
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 5.3e-106 388.3 230 81.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 5.3e-106 388.3 264 73.9
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 9.0e-106 387.5 286 68.5
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.5e-105 386.7 264 73.5
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.0e-105 386.3 293 68.3
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 2.6e-105 386.0 293 69.6
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.4e-105 385.6 229 83.0
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 5.9e-105 384.8 230 82.2
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 7.6e-105 384.4 229 82.5
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.0e-104 384.0 277 70.8
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.7e-104 383.3 228 82.9
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.2e-104 382.9 227 80.2
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 2.9e-104 382.5 297 68.0
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 2.9e-104 382.5 231 79.2
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 3.8e-104 382.1 283 69.3
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 5.0e-104 381.7 292 66.8
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 6.5e-104 381.3 239 77.4
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 6.5e-104 381.3 288 67.0
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.4e-103 380.2 230 79.6
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.9e-103 379.8 287 69.3
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 3.2e-103 379.0 229 79.5
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 4.2e-103 378.6 234 78.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 7.2e-103 377.9 234 78.2
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 1.6e-102 376.7 215 83.7
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.1e-102 376.3 240 76.7
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 2.7e-102 375.9 228 79.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 2.7e-102 375.9 228 79.8
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 3.6e-102 375.6 260 72.3
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.6e-102 375.6 234 79.1
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 6.1e-102 374.8 240 76.2
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.8e-101 373.2 216 83.3
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 2.3e-101 372.9 232 80.6
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 8.7e-101 370.9 289 67.5
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.5e-100 370.2 301 65.8
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.5e-100 370.2 288 67.4
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.9e-100 369.8 309 62.8
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.9e-100 369.8 298 66.4
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.9e-100 369.8 298 66.4
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 3.3e-100 369.0 230 78.7
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 4.3e-100 368.6 226 78.3
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 5.7e-100 368.2 244 73.0
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 9.7e-100 367.5 267 68.9
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.6e-99 366.7 303 63.0
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 3.7e-99 365.5 279 68.8
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 3.7e-99 365.5 289 67.1
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-98 363.6 263 70.3
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.4e-98 363.6 246 74.0
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 2.4e-98 362.8 233 76.0
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 5.3e-98 361.7 233 75.5
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 5.3e-98 361.7 229 76.4
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.4e-97 359.0 287 65.2
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.5e-97 358.6 289 65.4
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.5e-97 358.6 287 65.2
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.9e-97 358.2 287 64.8
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 5.9e-97 358.2 261 72.0
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.7e-96 356.7 303 63.0
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 6.5e-96 354.8 278 65.8
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 2.5e-95 352.8 218 79.8
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 2.3e-93 346.3 234 70.5
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 3.7e-91 339.0 245 71.0
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.0e-84 316.6 227 66.1
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.6e-81 307.0 245 65.7
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 2.0e-81 306.6 244 63.5
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.9e-79 300.1 200 76.5
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 8.8e-77 291.2 239 60.7
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 9.1e-74 281.2 204 64.2
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.9e-73 278.5 217 68.2
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.9e-71 273.5 228 64.9
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 4.7e-70 268.9 202 62.4
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 9.8e-68 261.2 165 77.0
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 4.5e-65 252.3 223 58.3
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 5.4e-42 175.6 269 41.6
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 6.2e-38 162.2 169 53.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 6.4e-35 152.1 249 39.0
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.5e-33 146.4 93 77.4
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.0e-32 144.8 229 37.6
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 4.7e-30 136.0 158 42.4
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 6.2e-30 135.6 93 72.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-26 124.4 118 61.0
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 7.8e-25 118.6 131 46.6
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 6.0e-09 65.9 114 40.4
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.0e-08 65.1 46 67.4


User provided reference genes

Program Settings