Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.1e-201 704.9 355 100.0
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 3.0e-180 635.2 356 91.3
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.6e-173 611.7 355 85.9
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 7.5e-171 604.0 355 83.4
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 6.0e-168 594.3 358 83.2
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.0e-167 593.6 352 82.1
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.9e-166 589.3 353 83.6
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.6e-165 585.1 349 84.0
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.1e-164 582.0 353 83.3
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.2e-163 580.1 355 81.1
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 3.4e-163 578.6 351 81.5
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.9e-162 575.5 352 78.7
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 6.4e-162 574.3 353 81.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.9e-161 572.8 347 81.0
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 3.2e-161 572.0 347 80.7
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.2e-160 570.1 351 79.2
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.2e-160 570.1 353 79.0
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.2e-160 570.1 347 79.8
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 1.6e-160 569.7 351 80.6
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 6.0e-160 567.8 347 79.8
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.3e-159 565.8 366 78.1
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 5.1e-159 564.7 341 81.5
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 8.6e-159 563.9 349 78.8
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 1.9e-158 562.8 353 78.2
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.9e-158 562.8 353 78.5
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 4.3e-158 561.6 349 77.7
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 5.6e-158 561.2 355 77.7
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 9.5e-158 560.5 353 79.9
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.2e-157 560.1 349 77.9
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 2.8e-157 558.9 351 78.1
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 3.6e-157 558.5 343 79.9
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 6.2e-157 557.8 355 78.3
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 6.2e-157 557.8 351 77.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.4e-156 556.6 347 77.5
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.8e-156 556.2 351 78.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 3.1e-156 555.4 347 78.7
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.5e-155 553.1 348 78.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 2.6e-155 552.4 354 75.7
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 7.5e-155 550.8 334 79.3
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 9.9e-155 550.4 347 77.2
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 6.4e-154 547.7 354 76.3
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 6.4e-154 547.7 349 77.7
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 8.3e-154 547.4 351 75.8
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 4.1e-153 545.0 352 76.1
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 5.4e-153 544.7 320 80.9
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 7.1e-153 544.3 344 77.3
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.2e-152 543.5 337 77.7
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 3.5e-152 542.0 346 77.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.3e-151 540.0 400 68.2
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.7e-151 539.7 349 76.5
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 3.0e-151 538.9 339 77.6
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 8.6e-151 537.3 348 75.9
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 8.6e-151 537.3 351 75.8
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 8.6e-151 537.3 353 75.1
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.5e-150 536.6 358 74.9
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.5e-150 536.6 346 75.4
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 2.5e-150 535.8 353 75.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 5.6e-150 534.6 351 75.2
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 5.6e-150 534.6 351 75.2
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 7.3e-150 534.3 351 75.2
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.6e-149 533.1 351 74.9
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 2.1e-149 532.7 351 75.2
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.1e-149 532.7 343 76.4
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 4.7e-149 531.6 349 75.4
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 4.7e-149 531.6 348 75.3
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 6.2e-149 531.2 351 74.6
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.1e-148 530.4 351 74.6
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.1e-148 528.9 351 74.4
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 4.0e-148 528.5 382 72.5
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 6.8e-148 527.7 349 75.6
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 8.9e-148 527.3 350 74.0
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.4e-147 525.4 341 74.8
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 2.2e-146 522.7 306 81.4
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.2e-146 522.7 346 74.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 6.4e-146 521.2 351 73.8
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 9.2e-145 517.3 346 73.1
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.6e-144 516.5 352 74.7
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.4e-140 503.4 351 71.8
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 9.0e-140 500.7 346 70.5
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.3e-138 496.9 346 70.5
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 2.2e-138 496.1 347 70.6
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 3.9e-135 485.3 343 67.9
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 7.3e-134 481.1 350 68.0
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.0e-132 475.3 263 87.8
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 1.9e-129 466.5 320 68.4
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.3e-127 459.5 349 67.6
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.5e-126 456.8 355 62.5
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.1e-121 440.7 253 85.0
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.9e-121 439.9 356 66.0
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.5e-120 435.6 394 60.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 7.9e-120 434.5 325 65.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.8e-117 426.0 351 63.5
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.4e-113 413.7 528 47.9
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.3e-111 407.1 342 62.3
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 7.4e-110 401.4 229 83.0
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 2.0e-107 393.3 222 84.2
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.0e-106 391.0 345 62.6
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.3e-103 379.8 257 75.1
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.5e-91 339.3 192 84.9
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 8.0e-88 328.2 337 56.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.8e-79 298.5 165 83.6
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 7.0e-76 288.5 177 80.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.1e-72 276.9 217 60.8
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.4e-70 269.6 407 38.3
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 4.2e-65 252.7 327 43.7
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.2e-59 234.6 130 81.5
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 1.5e-57 227.6 127 85.8
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.3e-50 204.5 345 37.4
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.2e-48 198.0 326 38.0
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.6e-46 190.3 126 71.4
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.5e-41 174.5 97 84.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.8e-39 167.5 100 75.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.6e-35 154.5 84 86.9
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.7e-26 124.4 83 68.7
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.5e-25 121.3 62 90.3
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 8.7e-18 95.5 76 59.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.6e-16 91.3 56 89.3
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.0e-10 70.5 37 78.4
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 1.3e-08 65.1 167 28.7
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 5.8e-06 56.2 30 83.3


User provided reference genes

Program Settings