Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G059000 Populus trichocarpa HOM05D010279 ORTHO05D011203 5.3e-46 187.2 86 100.0
MBI03_g11401_MAGBIO Magnolia biondii HOM05D010279 ORTHO05D011203 2.3e-12 75.5 48 68.8
Lalb_Chr08g0239211 Lupinus albus HOM05D010279 ORTHO05D011203 8.6e-12 73.6 74 48.6
Glyma.04G223100 Glycine max HOM05D010279 ORTHO05D011203 1.0e-09 66.6 65 49.2
Lalb_Chr11g0067761 Lupinus albus HOM05D010279 ORTHO05D011203 1.8e-09 65.9 75 44.0
CSS0000028 Camellia sinensis var. sinensis HOM05D010279 ORTHO05D011203 5.2e-09 64.3 40 65.0
Thecc.10G178900 Theobroma cacao HOM05D012883 ORTHO05D011203 5.2e-09 64.3 69 47.8
Os05g0323400 Oryza sativa ssp. japonica HOM05D010279 ORTHO05D011203 1.5e-08 62.8 42 59.5
Zm00001eb285070 Zea mays HOM05D012883 ORTHO05D011203 5.7e-08 60.8 54 51.9
Psat5g068480 Pisum sativum HOM05D010279 ORTHO05D011203 9.8e-08 60.1 68 51.5
TPR.G24271 Trifolium pratense HOM05D010279 ORTHO05D011203 1.3e-07 59.7 54 55.6
Nn5g26841 Nelumbo nucifera HOM05D010279 ORTHO05D011203 2.8e-07 58.5 42 59.5
Thecc.04G151000 Theobroma cacao HOM05D010279 ORTHO05D011203 2.8e-07 58.5 41 58.5
FAN03G0458 Fragaria x ananassa HOM05D012883 ORTHO05D011203 8.3e-07 57.0 73 42.5
RcHm_v2.0_Chr1g0372361 Rosa chinensis HOM05D012883 ORTHO05D011203 1.1e-06 56.6 83 42.2
Phvul.009G043300 Phaseolus vulgaris HOM05D010279 ORTHO05D011203 1.4e-06 56.2 34 64.7
Potri.006G108901 Populus trichocarpa HOM05D010279 ORTHO05D011203 2.4e-06 55.5 33 60.6
Glyma.06G142200 Glycine max HOM05D010279 ORTHO05D011203 4.1e-06 54.7 56 46.4
COL.COLO4_08296 Corchorus olitorius HOM05D010279 ORTHO05D011203 5.4e-06 54.3 41 53.7
Manes.07G143800 Manihot esculenta HOM05D010279 ORTHO05D011203 7.0e-06 53.9 62 43.5


User provided reference genes

Program Settings