Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.6e-155 552.7 280 100.0
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 2.4e-63 246.5 204 69.1
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.0e-45 188.0 287 42.2
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 2.6e-41 173.3 223 47.5
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 7.3e-36 155.2 240 40.0
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 2.1e-35 153.7 225 44.9
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 8.1e-35 151.8 224 46.9
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 5.2e-34 149.1 218 44.5
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 5.2e-34 149.1 213 43.7
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 6.8e-34 148.7 215 44.2
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.2e-33 147.9 249 40.2
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 9.8e-33 144.8 246 41.5
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 8.3e-32 141.7 213 39.9
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 3.2e-31 139.8 242 38.4
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 4.1e-31 139.4 204 41.2
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.1e-31 139.4 228 39.0
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 7.1e-31 138.7 195 44.6
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.6e-30 137.5 242 38.0
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 2.7e-30 136.7 211 42.7
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 2.7e-30 136.7 197 41.6
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 3.5e-30 136.3 195 47.2
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 4.6e-30 136.0 246 39.8
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 1.0e-29 134.8 243 39.1
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 1.3e-29 134.4 244 41.0
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 2.3e-29 133.7 232 41.8
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 3.0e-29 133.3 160 53.8
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 5.1e-29 132.5 251 38.6
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 1.5e-28 131.0 237 38.8
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.9e-28 130.6 159 54.1
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 7.3e-28 128.6 335 32.5
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 7.3e-28 128.6 191 39.3
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 7.3e-28 128.6 225 39.1
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 9.5e-28 128.3 224 38.8
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 2.1e-27 127.1 205 41.0
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.1e-27 127.1 185 45.4
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.8e-27 126.7 212 38.2
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 2.8e-27 126.7 212 38.2
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.6e-27 126.3 212 38.2
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 4.7e-27 125.9 223 37.2
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 4.7e-27 125.9 216 37.5
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 4.7e-27 125.9 210 39.5
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 8.1e-27 125.2 219 39.3
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.1e-26 123.2 211 39.8
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 5.2e-26 122.5 197 39.1
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 5.2e-26 122.5 206 38.3
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 6.8e-26 122.1 217 37.8
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 8.9e-26 121.7 208 33.2
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 8.9e-26 121.7 196 40.3
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 8.9e-26 121.7 203 41.4
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.2e-25 121.3 217 39.2
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.2e-25 121.3 218 36.7
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.6e-25 120.2 219 39.7
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 2.6e-25 120.2 219 39.7
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.4e-25 119.8 231 39.4
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 3.4e-25 119.8 211 37.4
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 7.6e-25 118.6 302 32.1
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.7e-24 117.5 193 38.9
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 2.2e-24 117.1 236 37.3
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 2.9e-24 116.7 185 42.7
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 3.7e-24 116.3 180 42.8
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 3.7e-24 116.3 223 36.8
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 8.4e-24 115.2 215 38.6
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.4e-23 114.4 194 38.1
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 1.9e-23 114.0 223 36.8
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 9.2e-23 111.7 289 31.8
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.6e-22 110.9 214 31.8
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 2.7e-22 110.2 193 37.8
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.5e-22 109.8 205 37.1
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 3.5e-22 109.8 214 36.4
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 3.5e-22 109.8 187 38.0
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 6.0e-22 109.0 196 37.2
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 6.0e-22 109.0 235 36.2
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 2.3e-21 107.1 187 37.4
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 3.0e-21 106.7 203 34.0
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 5.1e-21 105.9 210 37.6
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 6.6e-21 105.5 226 35.4
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 6.6e-21 105.5 169 35.5
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 8.6e-21 105.1 207 33.8
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 1.1e-20 104.8 224 32.1
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 1.1e-20 104.8 215 36.7
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.5e-20 104.4 210 36.2
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.9e-20 104.0 309 33.7
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 1.9e-20 104.0 218 35.8
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 2.5e-20 103.6 212 37.3
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.3e-20 102.8 215 35.8
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.3e-20 102.8 215 35.8
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.3e-20 102.8 215 35.8
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 5.6e-20 102.4 212 37.3
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 1.2e-19 101.3 175 40.6
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 1.2e-19 101.3 258 33.3
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 1.6e-19 100.9 223 34.5
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 2.8e-19 100.1 212 37.3
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.8e-19 100.1 206 35.9
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 1.1e-18 98.2 187 36.9
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 1.1e-18 98.2 217 37.3
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 1.4e-18 97.8 244 33.6
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 1.8e-18 97.4 243 31.7
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 2.4e-18 97.1 163 38.7
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 2.4e-18 97.1 213 34.7
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 4.0e-18 96.3 214 35.0
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 4.0e-18 96.3 141 39.7
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 1.2e-17 94.7 195 35.9
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 1.2e-17 94.7 220 32.3
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.5e-17 94.4 210 34.8
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 3.4e-17 93.2 255 29.4
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 4.4e-17 92.8 174 37.4
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 5.8e-17 92.4 216 31.5
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 7.6e-17 92.0 211 32.2
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 9.9e-17 91.7 192 33.9
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 1.3e-16 91.3 178 36.0
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 2.2e-16 90.5 234 31.6
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 2.9e-16 90.1 209 32.1
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 6.4e-16 89.0 220 27.3
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 1.9e-15 87.4 202 31.2
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 5.4e-15 85.9 142 38.0
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 7.1e-15 85.5 255 31.0
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 9.3e-15 85.1 202 33.2
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 1.6e-14 84.3 198 34.3
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 2.1e-14 84.0 180 35.6
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 4.6e-14 82.8 193 30.1
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 4.6e-14 82.8 140 42.9
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 2.3e-13 80.5 227 29.1
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 3.9e-13 79.7 163 33.1
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 5.1e-13 79.3 210 31.4
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 6.6e-13 79.0 191 34.6
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 8.7e-13 78.6 201 29.9
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 8.7e-13 78.6 200 31.5
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 1.9e-12 77.4 138 35.5
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 1.9e-12 77.4 100 45.0
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 2.5e-12 77.0 181 35.4
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 2.5e-12 77.0 218 33.5
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 2.5e-12 77.0 181 34.8
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 3.3e-12 76.6 204 28.4
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 4.3e-12 76.3 231 29.4
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 5.6e-12 75.9 143 38.5
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 7.3e-12 75.5 202 33.2
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 1.6e-11 74.3 155 36.1
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 2.1e-11 73.9 181 34.3
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 4.8e-11 72.8 211 31.3
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 8.1e-11 72.0 108 39.8
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 8.1e-11 72.0 211 26.5
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 4.0e-10 69.7 87 46.0
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 4.0e-10 69.7 223 29.6
Zm00001eb352040 Zea mays HOM05D003589 ORTHO05D005170 4.0e-10 69.7 204 31.9
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.5e-09 67.8 227 32.6
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 1.5e-09 67.8 249 26.9
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 2.6e-09 67.0 176 31.2
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 2.6e-09 67.0 81 53.1
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.7e-08 64.3 207 30.4
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 1.7e-08 64.3 87 46.0
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.2e-08 63.9 208 30.8
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.2e-08 63.9 214 26.6
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 6.4e-08 62.4 214 26.6
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.2e-07 60.1 223 27.4
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 4.2e-07 59.7 199 27.6
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.2e-07 59.7 223 28.7
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 5.4e-07 59.3 215 29.8
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 5.4e-07 59.3 206 26.7
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 9.3e-07 58.5 219 29.2
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 1.2e-06 58.2 199 31.7
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 1.6e-06 57.8 210 26.2
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.6e-06 57.8 206 31.6
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 2.7e-06 57.0 224 29.9
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 4.6e-06 56.2 215 29.8
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 4.6e-06 56.2 197 27.4


User provided reference genes

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