Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 1.6e-166 589.3 292 100.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.1e-148 530.0 327 83.2
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 3.9e-117 425.2 305 72.5
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 5.7e-116 421.4 295 73.9
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.4e-114 416.8 299 72.2
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 1.4e-114 416.8 298 70.5
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.3e-114 414.8 299 71.9
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 7.7e-113 411.0 302 71.5
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.9e-112 409.1 297 71.0
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 4.2e-111 405.2 306 69.9
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 5.5e-111 404.8 296 72.6
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 2.7e-110 402.5 300 70.0
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 3.6e-110 402.1 298 70.5
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 4.7e-110 401.7 294 69.0
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 1.8e-109 399.8 296 70.9
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 3.9e-109 398.7 296 70.3
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 3.9e-109 398.7 294 70.7
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 4.4e-108 395.2 303 68.6
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 7.4e-108 394.4 295 71.9
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 9.7e-108 394.0 301 68.4
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.3e-107 393.7 295 69.5
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 2.2e-107 392.9 291 69.4
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 2.8e-107 392.5 293 70.6
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 3.7e-107 392.1 296 69.3
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 4.8e-107 391.7 292 71.2
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 8.2e-107 391.0 302 68.5
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 5.3e-106 388.3 293 69.3
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 5.3e-106 388.3 293 67.6
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 7.0e-106 387.9 298 67.8
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.2e-105 387.1 302 68.5
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.6e-105 386.7 296 69.3
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.7e-104 383.3 295 68.8
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 1.7e-104 383.3 294 66.7
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 2.9e-104 382.5 295 68.8
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 3.8e-104 382.1 295 69.2
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 5.0e-104 381.7 295 68.5
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 5.0e-104 381.7 306 65.4
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 6.5e-104 381.3 299 67.9
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 1.1e-103 380.6 304 66.4
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.9e-103 379.8 293 66.6
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 3.2e-103 379.0 303 68.0
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 7.2e-103 377.9 295 67.8
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 7.2e-103 377.9 293 69.3
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 9.4e-103 377.5 300 66.3
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 2.1e-102 376.3 285 69.5
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 3.6e-102 375.6 303 66.3
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 4.7e-102 375.2 285 69.5
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 8.0e-102 374.4 301 65.1
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 2.3e-101 372.9 304 66.1
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 3.0e-101 372.5 271 71.6
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.1e-100 370.5 281 68.0
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 7.5e-100 367.9 290 65.2
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 7.5e-100 367.9 310 64.5
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 9.7e-100 367.5 265 67.5
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.3e-99 367.1 301 66.1
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-99 367.1 274 67.9
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 2.8e-99 365.9 301 65.8
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 4.8e-99 365.2 265 69.1
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 8.2e-99 364.4 278 66.5
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.8e-98 363.2 291 66.7
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 3.1e-98 362.5 283 66.8
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 3.1e-98 362.5 279 68.8
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 7.0e-98 361.3 293 66.2
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 7.0e-98 361.3 351 56.4
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.1e-98 360.9 286 65.4
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.6e-97 360.1 290 65.9
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 2.0e-97 359.8 299 64.2
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 2.7e-97 359.4 270 66.3
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 5.9e-97 358.2 284 65.5
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 6.5e-96 354.8 325 60.9
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 1.5e-95 353.6 299 63.5
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 1.9e-95 353.2 251 69.3
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.9e-95 353.2 275 64.7
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 7.2e-95 351.3 321 58.3
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.2e-94 350.5 285 63.2
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 1.8e-93 346.7 289 65.4
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 3.0e-93 345.9 300 62.7
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 4.0e-93 345.5 306 59.8
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.0e-93 345.5 325 59.4
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 1.5e-92 343.6 294 62.2
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 2.6e-92 342.8 270 64.1
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 7.5e-92 341.3 292 61.0
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 1.7e-91 340.1 294 61.9
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.8e-90 336.7 311 62.1
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.7e-88 330.1 333 56.2
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 1.2e-86 323.9 313 56.5
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 1.6e-86 323.6 296 58.4
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.6e-86 323.6 292 62.0
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.6e-86 323.6 278 61.9
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 4.7e-86 322.0 299 59.9
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 3.7e-83 312.4 298 60.4
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.4e-82 310.5 295 58.3
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 3.8e-80 302.4 302 58.6
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 3.6e-78 295.8 301 53.5
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.5e-76 290.4 235 64.3
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 2.2e-75 286.6 294 55.4
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.4e-74 283.9 227 64.3
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 7.3e-71 271.6 211 62.6
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 4.0e-69 265.8 195 67.7
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 3.7e-67 259.2 176 72.2
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 9.2e-66 254.6 188 70.7
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.4e-58 229.9 152 69.7
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 3.3e-55 219.5 294 45.9
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 9.5e-55 218.0 181 64.6
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 3.6e-54 216.1 290 44.5
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 3.8e-51 206.1 247 48.6
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 3.8e-51 206.1 161 67.7
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 3.5e-49 199.5 171 64.3
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 1.7e-48 197.2 125 80.0
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 3.3e-47 193.0 222 51.8
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 8.1e-46 188.3 298 38.9
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.4e-45 187.6 303 39.9
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 9.9e-44 181.4 158 62.7
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.9e-43 179.9 300 40.3
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 3.5e-41 172.9 305 38.0
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.7e-40 168.3 160 58.1
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.4e-37 161.0 151 58.9
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 8.4e-35 151.8 104 75.0
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.1e-34 151.4 104 73.1
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 7.9e-33 145.2 135 63.0
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.0e-32 144.8 158 53.8
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 1.1e-29 134.8 89 69.7
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 4.0e-21 106.3 84 67.9
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 2.0e-20 104.0 115 53.0
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 2.6e-20 103.6 248 35.9
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.1e-18 98.2 85 64.7
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.1e-18 98.2 82 67.1
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 1.9e-18 97.4 108 53.7
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 6.0e-17 92.4 98 60.2
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.8e-16 90.9 299 27.8
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 8.2e-14 82.0 290 27.9
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.6e-09 67.8 78 51.3
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 9.7e-07 58.5 177 27.7


User provided reference genes

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