Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 5.7e-267 923.7 472 100.0
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 9.7e-158 560.8 477 67.1
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 2.5e-57 227.3 618 34.6
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 6.3e-56 222.6 547 36.4
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 1.9e-52 211.1 504 37.5
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 2.3e-50 204.1 608 32.6
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 1.7e-48 198.0 475 36.0
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 3.7e-48 196.8 515 34.4
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 6.3e-48 196.1 610 32.3
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 1.1e-47 195.3 492 33.9
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 1.5e-46 191.4 565 32.4
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 3.8e-45 186.8 507 34.9
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 4.2e-44 183.3 509 32.4
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 1.8e-42 177.9 531 30.7
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 5.7e-41 172.9 505 31.5
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 4.8e-40 169.9 567 31.4
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 8.2e-40 169.1 477 30.8
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 5.3e-39 166.4 598 29.8
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 3.5e-38 163.7 626 30.2
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 5.9e-38 162.9 624 30.8
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 2.9e-37 160.6 540 28.7
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.2e-35 155.2 565 29.6
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 1.2e-35 155.2 498 30.5
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 2.1e-35 154.5 656 28.5
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 6.1e-35 152.9 527 29.2
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 8.0e-35 152.5 496 29.6
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.0e-34 152.1 665 28.1
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 1.8e-34 151.4 560 29.6
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 2.3e-34 151.0 585 29.4
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 1.5e-33 148.3 588 29.8
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 2.0e-33 147.9 557 27.8
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 2.0e-33 147.9 670 27.9
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 2.6e-33 147.5 570 28.6
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 7.4e-33 146.0 578 29.1
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 9.7e-33 145.6 611 27.2
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 1.3e-32 145.2 572 29.0
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 2.8e-32 144.1 574 27.0
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 4.8e-32 143.3 530 29.4
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 4.5e-30 136.7 394 32.7
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 1.0e-29 135.6 602 24.6
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 1.7e-29 134.8 176 44.9
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 2.9e-29 134.0 590 27.1
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 3.8e-29 133.7 460 30.7
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 1.2e-27 128.6 447 30.2
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 1.6e-27 128.3 476 28.2
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 2.1e-27 127.9 155 48.4
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 3.6e-27 127.1 408 32.1
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 3.6e-27 127.1 682 25.4
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 3.6e-27 127.1 566 28.1
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 6.1e-27 126.3 490 27.8
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 8.0e-27 125.9 480 29.8
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 8.8e-26 122.5 318 35.5
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.6e-25 120.9 597 28.5
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 1.3e-24 118.6 603 26.4
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 2.4e-23 114.4 233 35.2
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 3.1e-23 114.0 175 42.3
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 4.1e-23 113.6 449 29.2
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 2.9e-21 107.5 70 70.0
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 3.8e-21 107.1 304 29.9
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 5.0e-21 106.7 71 67.6
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 1.9e-20 104.8 323 34.1
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 2.5e-20 104.4 349 27.8
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 5.5e-20 103.2 71 64.8
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 1.6e-19 101.7 72 65.3
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 1.6e-19 101.7 311 29.9
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 2.1e-19 101.3 605 23.6
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 2.1e-19 101.3 180 33.3
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 4.7e-19 100.1 647 25.0
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 8.0e-19 99.4 635 23.9
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 1.0e-18 99.0 452 25.7
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.4e-18 98.6 72 68.1
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 1.8e-18 98.2 71 64.8
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 3.0e-18 97.4 468 26.3
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 5.2e-18 96.7 72 63.9
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 6.8e-18 96.3 285 30.9
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 1.2e-17 95.5 470 26.4
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 1.5e-17 95.1 449 24.5
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 2.0e-17 94.7 427 27.9
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 2.0e-17 94.7 232 36.6
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 3.4e-17 94.0 458 26.2
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 5.7e-17 93.2 494 27.7
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 3.7e-16 90.5 468 25.4
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 1.1e-15 89.0 467 23.1
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 3.1e-15 87.4 467 24.4
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 3.1e-15 87.4 624 23.4
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 1.2e-14 85.5 467 24.8
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 1.2e-14 85.5 96 55.2
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 5.9e-14 83.2 449 22.9
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 5.9e-14 83.2 130 39.2
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 5.9e-14 83.2 137 43.1
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.0e-13 82.4 464 24.6
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 1.0e-13 82.4 73 49.3
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 3.8e-13 80.5 471 22.7
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 6.6e-13 79.7 466 23.2
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.1e-12 79.0 451 22.4
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 1.5e-12 78.6 470 25.7
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 1.9e-12 78.2 50 70.0
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 1.9e-12 78.2 96 52.1
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 1.9e-12 78.2 66 56.1
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 1.9e-12 78.2 89 52.8
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 2.5e-12 77.8 451 24.2
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 3.3e-12 77.4 87 40.2
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 3.3e-12 77.4 87 40.2
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 3.3e-12 77.4 278 30.9
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 3.3e-12 77.4 467 23.1
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 4.2e-12 77.0 118 37.3
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 9.5e-12 75.9 87 40.2
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 4.7e-11 73.6 78 41.0
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.0e-10 72.4 85 50.6
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 3.0e-10 70.9 461 25.2
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 3.0e-10 70.9 266 31.2
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 4.0e-10 70.5 84 38.1
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 1.2e-09 68.9 76 42.1
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 1.2e-09 68.9 439 23.5
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 4.4e-09 67.0 77 50.6
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 7.5e-09 66.2 455 24.8
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 2.8e-08 64.3 215 30.7
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 3.7e-08 63.9 423 23.9
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 9.2e-07 59.3 236 27.5
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 1.6e-06 58.5 57 54.4


User provided reference genes

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