Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 5.1e-182 641.0 329 100.0
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.8e-163 579.3 332 90.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.1e-163 578.6 330 90.3
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.7e-159 565.5 332 88.3
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 87.7
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 8.0e-159 563.9 330 87.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 88.7
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.8e-158 562.8 335 87.2
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.8e-158 562.8 332 87.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 3.0e-158 562.0 325 89.5
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 6.8e-158 560.8 330 87.9
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 2.6e-157 558.9 332 87.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 4.4e-157 558.1 326 87.7
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 7.5e-157 557.4 331 85.8
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.3e-156 556.6 327 87.2
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.2e-156 555.8 329 87.5
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 6.3e-156 554.3 335 87.2
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 6.3e-156 554.3 335 87.2
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.3e-156 553.9 330 87.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.8e-155 552.7 331 85.5
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 329 85.7
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.0e-154 549.3 326 87.1
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.7e-154 548.9 331 85.2
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.7e-154 548.9 327 86.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.5e-154 548.5 332 85.2
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.5e-154 548.5 331 84.6
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.5e-154 548.1 330 85.5
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 5.9e-154 547.7 331 84.9
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 7.7e-154 547.4 332 84.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.3e-153 545.8 326 85.3
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.9e-153 545.4 332 85.8
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.9e-153 545.4 331 84.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.8e-153 545.0 332 84.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.8e-153 545.0 331 84.9
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 5.0e-153 544.7 331 83.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-152 542.0 337 83.7
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.2e-152 541.6 332 84.3
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.2e-152 541.6 329 84.5
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 5.5e-152 541.2 332 85.2
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 84.0
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 84.0
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.6e-151 539.7 324 85.5
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.6e-151 539.7 327 85.0
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.1e-151 537.7 327 85.0
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.0e-150 537.0 332 81.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.4e-150 536.6 332 82.2
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.0e-150 535.0 386 75.4
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 5.2e-150 534.6 332 82.2
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.8e-150 534.3 332 81.3
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.2e-149 533.5 373 78.3
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.0e-149 532.7 330 84.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.0e-149 532.7 332 81.6
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 2.0e-149 532.7 332 81.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.6e-149 532.3 332 81.9
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 2.6e-149 532.3 332 81.0
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.4e-149 531.9 332 81.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 5.7e-149 531.2 329 82.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.7e-149 531.2 333 81.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 9.8e-149 530.4 327 82.0
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.8e-149 530.4 330 82.4
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.8e-149 530.4 330 82.4
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-148 530.0 332 82.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.7e-148 529.6 328 82.6
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.2e-148 529.3 329 82.1
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.2e-148 529.3 330 82.1
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.8e-148 528.9 331 83.4
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.9e-148 528.1 325 82.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 6.3e-148 527.7 329 82.1
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 8.3e-148 527.3 331 81.6
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.8e-147 526.2 331 81.3
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.8e-147 526.2 326 82.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.8e-147 526.2 329 81.8
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.1e-147 525.4 333 80.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.2
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 5.4e-147 524.6 325 82.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 9.2e-147 523.9 325 82.5
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.2e-146 523.5 359 76.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 2.7e-146 522.3 330 81.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.3e-145 519.2 331 80.7
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.8e-145 518.5 326 81.9
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.0e-145 518.1 331 80.4
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 6.6e-145 517.7 331 80.4
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-144 516.9 331 80.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.3e-144 514.2 327 80.7
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.8e-143 512.3 455 63.7
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.8e-143 512.3 325 81.5
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 5.2e-142 508.1 329 79.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.2e-142 508.1 314 82.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.2e-139 497.3 304 84.2
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.3e-137 493.4 324 78.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-137 493.4 329 77.8
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.7e-137 493.0 330 78.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.0e-137 491.5 290 84.8
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.3e-136 488.4 332 79.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.1e-135 486.1 328 76.8
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.8e-134 483.0 331 77.0
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 3.4e-133 478.8 331 76.7
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 6.0e-130 468.0 330 72.7
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.9e-129 465.3 377 67.9
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.9e-129 465.3 329 71.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.6e-128 461.5 302 80.1
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.8e-126 456.4 326 75.2
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.6e-125 452.6 325 71.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 7.8e-122 441.0 331 71.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.3e-121 439.5 279 80.6
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 8.1e-119 431.0 334 71.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.4e-109 399.1 234 87.2
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.4e-108 394.4 322 67.4
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.6e-106 390.2 330 62.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 5.1e-105 385.2 324 58.6
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 3.3e-104 382.5 316 62.3
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.6e-103 379.0 233 82.4
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.1e-99 364.8 321 62.9
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 3.3e-96 355.9 275 68.7
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 6.0e-90 335.1 197 87.8
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.8e-87 326.2 229 74.7
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.6e-85 319.7 238 67.6
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.0e-84 317.8 331 58.6
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.2e-83 312.8 335 56.4
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 7.9e-82 308.1 220 75.9
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-80 304.3 220 75.0
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-77 293.9 220 74.1
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.0e-76 288.9 167 87.4
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.6e-74 282.7 333 45.6
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 5.9e-69 265.4 165 83.6
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.0e-65 253.1 165 77.6
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.3e-62 242.3 329 48.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.5e-61 240.7 267 53.9
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-58 229.2 135 85.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-52 209.5 130 83.1
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 8.0e-42 175.3 147 60.5
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 3.4e-40 169.9 162 59.3
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.4e-40 169.9 103 80.6
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 9.1e-38 161.8 103 81.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.3e-36 157.9 181 53.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.5e-35 153.7 87 85.1
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 5.2e-33 146.0 92 83.7
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.0e-29 134.0 90 78.9
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.0e-29 134.0 69 89.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.3e-28 130.6 88 73.9
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 6.6e-28 129.0 80 80.0
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.6e-26 124.4 77 84.4
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 2.1e-26 124.0 74 82.4
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-26 122.9 72 81.9
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-23 114.4 75 73.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-22 110.2 72 79.2
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.6e-21 107.8 69 78.3
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-18 97.4 67 79.1
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-15 87.8 65 73.8
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.1e-09 68.6 85 50.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 9.9e-08 62.0 46 63.0
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 2.2e-07 60.8 33 84.8


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