Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 8.8e-156 555.4 1025 100.0
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 8.9e-132 475.7 348 94.0
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 2.5e-78 298.1 367 69.2
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 4.2e-73 280.8 350 70.0
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 4.2e-73 280.8 348 69.3
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 1.7e-69 268.9 310 73.2
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 7.7e-67 260.0 354 67.8
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 1.1e-65 256.1 355 66.8
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 3.1e-60 238.0 344 67.4
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 2.6e-59 235.0 344 67.4
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 2.6e-59 235.0 351 64.4
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 1.3e-58 232.6 308 68.5
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 6.5e-58 230.3 344 67.2
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 6.5e-58 230.3 344 66.9
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 4.0e-55 221.1 348 63.5
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 6.7e-55 220.3 350 64.0
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 7.5e-54 216.9 350 62.9
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 6.3e-53 213.8 335 64.8
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 6.3e-53 213.8 335 64.8
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 1.8e-52 212.2 351 63.0
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 2.4e-52 211.8 352 63.4
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 5.3e-52 210.7 353 62.6
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 3.5e-51 208.0 352 61.4
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 1.3e-50 206.1 147 66.0
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 2.2e-50 205.3 363 60.1
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 1.2e-48 199.5 350 61.4
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 2.1e-48 198.7 364 60.7
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 8.0e-48 196.8 306 66.3
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 2.3e-47 195.3 358 41.1
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 1.2e-46 193.0 325 47.4
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 4.4e-46 191.0 325 49.8
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 1.4e-44 186.0 321 62.6
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 1.4e-44 186.0 321 62.6
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 3.1e-44 184.9 164 56.1
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 2.7e-43 181.8 173 56.6
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 3.5e-43 181.4 330 42.1
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 1.3e-42 179.5 339 42.8
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 1.5e-41 176.0 280 47.5
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 1.5e-41 176.0 168 54.8
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 2.5e-41 175.3 241 76.8
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 4.2e-41 174.5 192 46.4
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 1.2e-40 172.9 363 57.0
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 3.6e-40 171.4 332 38.3
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 4.7e-40 171.0 143 57.3
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.4e-39 169.5 325 38.8
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 1.8e-39 169.1 143 56.6
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 2.0e-38 165.6 140 55.7
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 7.5e-38 163.7 316 41.5
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 3.7e-37 161.4 334 38.0
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 6.3e-37 160.6 309 38.8
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 3.1e-36 158.3 349 56.7
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 2.7e-35 155.2 318 36.5
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 5.0e-34 151.0 330 40.9
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 8.6e-34 150.2 362 37.8
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 5.6e-33 147.5 147 49.0
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 1.2e-30 139.8 268 40.3
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 1.7e-29 136.0 143 46.9
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 3.2e-28 131.7 268 43.7
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 1.2e-27 129.8 184 43.5
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 2.0e-27 129.0 308 54.2
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 3.5e-27 128.3 303 32.7
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.3e-26 125.6 137 48.9
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 5.0e-26 124.4 180 41.7
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 1.5e-25 122.9 179 44.7
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 4.3e-25 121.3 334 33.5
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 9.5e-25 120.2 117 52.1
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 3.6e-24 118.2 315 55.2
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 1.1e-23 116.7 276 34.8
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 1.8e-23 115.9 235 31.9
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 3.1e-23 115.2 179 41.3
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 1.2e-22 113.2 184 39.7
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 2.4e-20 105.5 100 52.0
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 9.2e-20 103.6 184 39.1
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 9.2e-20 103.6 188 38.8
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 1.2e-19 103.2 176 38.1
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 1.2e-19 103.2 176 39.8
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 1.2e-19 103.2 176 39.8
MELO3C024749.2 Cucumis melo HOM05D021906 ORTHO05D009365 7.8e-19 100.5 73 63.0
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 7.8e-19 100.5 70 62.9
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 1.0e-18 100.1 144 42.4
CsaV3_2G035920 Cucumis sativus L. HOM05D021906 ORTHO05D009365 1.3e-18 99.8 73 61.6
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 2.3e-18 99.0 184 37.5
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 2.3e-18 99.0 79 57.0
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 3.9e-18 98.2 68 64.7
AT5G14770 Arabidopsis thaliana HOM05D007570 ORTHO05D009365 5.1e-18 97.8 179 38.5
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 1.1e-17 96.7 180 37.8
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.2e-16 93.2 95 53.7
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 1.8e-15 89.4 122 42.6
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 3.1e-15 88.6 64 60.9
Haze_00350 Corylus avellana HOM05D007570 ORTHO05D009365 6.4e-13 80.9 96 54.2
Aa31LG11G14690 Aethionema arabicum HOM05D007570 ORTHO05D009365 1.6e-11 76.3 71 43.7
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 6.0e-11 74.3 128 30.5
Lj5C430G10 Lonicera japonica HOM05D007570 ORTHO05D009365 1.3e-10 73.2 45 71.1
Lj5C430G7 Lonicera japonica HOM05D007570 ORTHO05D009365 3.0e-10 72.0 142 34.5
GSVIVG01013840001 Vitis vinifera HOM05D007570 ORTHO05D009365 3.0e-10 72.0 70 47.1
ATR0680G349 Amborella trichopoda HOM05D007570 ORTHO05D009365 1.9e-09 69.3 263 55.9
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 9.5e-09 67.0 135 28.1
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 3.6e-08 65.1 102 35.3
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 6.2e-08 64.3 134 27.6
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 6.2e-08 64.3 134 27.6
Aa31LG7G1940 Aethionema arabicum HOM05D007623 ORTHO05D009641 1.4e-07 63.2 89 34.8
BraA03t09431Z Brassica rapa HOM05D007455 ORTHO05D009431 1.8e-07 62.8 150 29.3
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.8e-07 62.8 147 26.5
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 2.4e-07 62.4 47 59.6
SEGI_21341 Sequoiadendron giganteum HOM05D000891 ORTHO05D002107 2.4e-07 62.4 98 34.7
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 4.0e-07 61.6 121 28.1
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 4.0e-07 61.6 150 28.7
FAN10G4006 Fragaria x ananassa HOM05D007570 ORTHO05D009365 4.0e-07 61.6 71 47.9
AUR62020702 Chenopodium quinoa HOM05D007570 ORTHO05D009365 5.2e-07 61.2 68 42.6
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 6.8e-07 60.8 136 28.7
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 1.2e-06 60.1 92 37.0
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.5e-06 59.7 147 26.5
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 1.5e-06 59.7 135 28.1
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.0e-06 59.3 96 37.5
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.0e-06 59.3 96 37.5
SalBow3G4252 Salvia bowleyana HOM05D007570 ORTHO05D009365 2.0e-06 59.3 48 45.8
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 4.4e-06 58.2 135 28.9
BcaB01g06086 Brassica carinata HOM05D007455 ORTHO05D009431 4.4e-06 58.2 136 28.7
C03p00670 Brassica napus HOM05D007455 ORTHO05D009431 5.8e-06 57.8 136 27.9
BolC3t12630H Brassica oleracea HOM05D007455 ORTHO05D009431 5.8e-06 57.8 136 27.9
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 5.8e-06 57.8 122 30.3
Hma1.2p1_1014F.1_g247820 Hydrangea macrophylla HOM05D000104 ORTHO05D009920 5.8e-06 57.8 141 27.7
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 7.6e-06 57.4 106 33.0
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 9.9e-06 57.0 135 27.4


User provided reference genes

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