Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.6e-109 399.4 198 100.0
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.5e-88 329.7 270 66.7
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 3.4e-80 302.0 273 61.5
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 6.9e-65 251.1 278 53.6
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.5e-62 241.5 211 64.9
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 6.9e-57 224.6 260 53.5
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.5e-56 223.4 281 47.3
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.0e-55 220.7 285 49.5
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 2.5e-54 216.1 283 48.8
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 5.5e-54 214.9 285 47.7
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.5e-54 214.9 285 48.8
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 5.5e-54 214.9 285 49.1
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.1e-51 207.2 297 45.8
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.3e-50 203.8 283 45.2
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.3e-50 203.8 285 46.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 2.8e-50 202.6 278 45.7
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 4.1e-49 198.7 285 45.6
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 6.9e-49 198.0 287 44.9
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.6e-48 196.1 285 44.9
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 2.6e-48 196.1 283 44.2
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 5.9e-48 194.9 98 92.9
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 2.2e-47 193.0 247 49.8
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 5.0e-47 191.8 282 43.3
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 6.5e-47 191.4 270 46.3
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.4e-46 190.3 281 44.5
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 2.5e-46 189.5 285 43.9
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.5e-46 189.5 283 42.4
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 3.2e-46 189.1 288 43.4
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 7.2e-46 188.0 317 40.7
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 9.4e-46 187.6 284 43.3
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.7e-45 186.0 280 42.5
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 3.6e-45 185.7 293 40.3
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 6.1e-45 184.9 282 40.4
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 7.9e-45 184.5 289 41.9
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.0e-44 184.1 289 40.5
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.0e-44 184.1 294 40.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.0e-44 184.1 302 39.7
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.4e-44 183.7 275 43.3
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.8e-44 183.3 276 42.4
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 3.9e-44 182.2 290 40.3
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 8.8e-44 181.0 284 41.9
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 1.5e-43 180.3 276 42.0
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 2.5e-43 179.5 282 41.8
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 5.7e-43 178.3 98 83.7
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 7.4e-43 177.9 270 40.0
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 7.4e-43 177.9 98 83.7
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 9.7e-43 177.6 293 40.3
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 1.3e-42 177.2 287 40.8
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 1.3e-42 177.2 279 41.6
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 2.2e-42 176.4 277 41.2
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 2.8e-42 176.0 98 81.6
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 4.8e-42 175.3 289 40.5
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 1.4e-41 173.7 288 41.3
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 3.1e-41 172.6 189 50.3
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 5.3e-41 171.8 287 40.8
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 5.3e-41 171.8 285 39.3
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 9.1e-41 171.0 288 39.2
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 1.2e-40 170.6 102 77.5
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 1.5e-40 170.2 98 79.6
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 3.4e-40 169.1 297 40.1
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 5.9e-40 168.3 280 38.2
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 5.9e-40 168.3 280 38.2
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 5.9e-40 168.3 280 38.2
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 5.9e-40 168.3 102 78.4
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.3e-39 167.2 98 78.6
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 2.2e-39 166.4 284 40.8
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 2.2e-39 166.4 102 74.5
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 5.0e-39 165.2 290 39.7
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.1e-38 164.1 100 73.0
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.1e-38 164.1 268 39.2
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.9e-38 163.3 98 77.6
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.9e-38 163.3 98 76.5
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 1.9e-38 163.3 272 41.9
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 4.2e-38 162.2 278 41.0
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 4.2e-38 162.2 287 39.0
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 7.2e-38 161.4 112 66.1
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 9.4e-38 161.0 288 38.5
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 2.1e-37 159.8 282 38.7
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 3.6e-37 159.1 115 67.0
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 4.7e-37 158.7 284 37.7
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.4e-36 157.1 267 38.6
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.4e-36 157.1 282 39.0
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 3.9e-36 155.6 283 38.9
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 5.1e-36 155.2 94 72.3
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.1e-35 154.1 91 75.8
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.0e-35 153.3 214 44.4
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.6e-35 152.9 98 74.5
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 5.7e-35 151.8 191 44.0
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 5.7e-35 151.8 187 44.4
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 5.7e-35 151.8 90 72.2
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 7.4e-35 151.4 102 67.6
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 9.7e-35 151.0 98 70.4
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 9.1e-33 144.4 217 43.3
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 5.9e-32 141.7 292 37.3
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.1e-30 137.5 249 39.0
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.5e-30 137.1 332 31.9
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.0e-28 131.0 210 42.9
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.5e-22 110.5 243 32.9
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 3.2e-22 109.4 93 55.9
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 2.7e-21 106.3 257 31.1
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.3e-20 103.2 219 35.2
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 6.8e-20 101.7 93 51.6
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 4.4e-19 99.0 147 38.1
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 9.8e-19 97.8 92 47.8
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 7.7e-16 88.2 90 43.3
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.5e-14 84.0 222 34.7
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 1.4e-12 77.4 91 42.9
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 6.8e-12 75.1 230 27.4
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 3.4e-11 72.8 64 51.6
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.1e-09 67.8 48 60.4
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 2.9e-07 59.7 130 41.5
Oeu048435.1 Olea europaea HOM05D006942 ORTHO05D008737 1.9e-06 57.0 127 39.4


User provided reference genes

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