Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G028450 Populus trichocarpa HOM05D008299 ORTHO05D010400 1.0e-30 136.0 63 100.0
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 9.0e-19 96.3 68 72.1
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 9.0e-19 96.3 68 72.1
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 4.5e-18 94.0 67 70.1
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 2.2e-17 91.7 67 68.7
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 3.8e-17 90.9 67 68.7
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 5.0e-17 90.5 67 67.2
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 5.5e-16 87.0 67 65.7
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.7e-15 84.7 66 65.2
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 3.6e-15 84.3 67 62.7
RcHm_v2.0_CPg0501791 Rosa chinensis HOM05D008299 ORTHO05D010400 3.9e-14 80.9 58 67.2
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 3.9e-14 80.9 68 60.3
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 8.7e-14 79.7 67 62.7
RcHm_v2.0_Chr5g0051131 Rosa chinensis HOM05D008299 ORTHO05D010400 8.7e-14 79.7 44 84.1
RcHm_v2.0_CPg0502621 Rosa chinensis HOM05D008299 ORTHO05D010400 8.7e-14 79.7 44 84.1
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.5e-13 79.0 67 61.2
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.7e-13 77.0 67 62.7
Solyc11g018700.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 7.2e-08 60.1 35 77.1
Medtr0002s0330 Medicago truncatula HOM05D008299 ORTHO05D010400 2.1e-07 58.5 51 58.8
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.6e-07 57.8 31 83.9
Solyc01g017150.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.4e-06 55.8 35 71.4
Migut.L00537 Erythranthe guttata HOM05D008299 ORTHO05D010400 3.9e-06 54.3 36 69.4
Solyc00g500038.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
Solyc00g500045.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
Solyc00g500082.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
Solyc00g500127.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
Solyc00g500197.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
Solyc00g500300.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
Solyc00g500326.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-06 54.3 30 83.3
ClCG00G002340 Citrullus lanatus HOM05D008299 ORTHO05D010400 6.7e-06 53.5 32 78.1


User provided reference genes

Program Settings