Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.9e-156 555.8 292 100.0
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 2.1e-118 429.5 338 71.0
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 6.2e-62 241.9 293 54.3
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 2.1e-54 216.9 287 50.2
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 8.6e-48 194.9 294 48.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 2.8e-46 189.9 311 44.4
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.8e-45 187.2 299 43.5
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 2.4e-45 186.8 250 54.4
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 7.6e-44 181.8 226 50.4
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.9e-42 177.2 295 44.1
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.9e-42 177.2 295 44.1
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 9.3e-42 174.9 182 57.7
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 1.3e-40 171.0 249 47.8
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 6.6e-40 168.7 310 43.2
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 6.6e-40 168.7 302 42.1
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-39 167.9 311 41.8
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.1e-37 161.4 187 52.4
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 2.4e-37 160.2 293 43.3
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 3.1e-37 159.8 309 39.5
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 3.1e-37 159.8 180 55.6
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 6.9e-37 158.7 313 41.5
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 6.9e-37 158.7 307 37.5
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.9e-35 152.5 266 40.6
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 8.4e-35 151.8 187 50.8
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.1e-34 151.4 256 41.4
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.4e-34 151.0 261 38.7
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 1.6e-33 147.5 318 37.7
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.6e-33 147.5 289 40.8
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 4.6e-33 146.0 185 47.6
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 6.0e-33 145.6 181 48.6
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 7.9e-33 145.2 189 47.1
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.3e-32 144.4 272 43.4
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 3.0e-32 143.3 299 36.1
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 2.5e-31 140.2 181 45.3
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 4.3e-31 139.4 179 44.7
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 2.8e-30 136.7 209 42.6
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 1.8e-29 134.0 189 42.9
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 4.0e-29 132.9 294 40.5
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 5.3e-29 132.5 241 39.8
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 9.0e-29 131.7 253 42.7
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 1.2e-28 131.3 183 44.3
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 2.0e-28 130.6 183 44.3
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 2.0e-28 130.6 270 35.6
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 2.6e-28 130.2 184 44.6
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 3.4e-28 129.8 243 40.7
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 3.4e-28 129.8 184 45.7
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 4.5e-28 129.4 276 39.5
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 5.8e-28 129.0 186 44.1
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 7.6e-28 128.6 191 41.9
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 7.6e-28 128.6 257 42.8
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 9.9e-28 128.3 227 37.0
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 3.8e-27 126.3 185 43.2
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 3.8e-27 126.3 183 43.2
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 4.9e-27 125.9 184 42.4
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 4.9e-27 125.9 262 37.4
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.9e-27 125.9 245 42.9
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 4.9e-27 125.9 315 34.6
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 1.1e-26 124.8 184 42.4
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 1.4e-26 124.4 189 41.3
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 1.4e-26 124.4 316 40.8
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 1.9e-26 124.0 185 44.9
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 1.9e-26 124.0 185 42.7
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.9e-26 124.0 180 43.3
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 1.9e-26 124.0 180 46.1
AL3G14300 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 1.6e-25 120.9 250 40.0
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 4.6e-25 119.4 183 42.6
AT3G04310 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 6.0e-25 119.0 234 41.9
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 6.0e-25 119.0 323 32.8
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 1.3e-24 117.9 183 42.1
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 1.3e-24 117.9 188 40.4
CARHR078490 Cardamine hirsuta HOM05D004244 ORTHO05D004964 3.0e-24 116.7 256 37.5
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 3.0e-24 116.7 172 43.6
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 5.1e-24 115.9 184 41.3
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 6.7e-24 115.5 180 43.3
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 1.5e-23 114.4 283 33.9
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 1.5e-23 114.4 177 41.8
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 1.9e-23 114.0 187 41.7
Sp3g03210 Schrenkiella parvula HOM05D004244 ORTHO05D004964 1.9e-23 114.0 238 41.6
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 5.6e-23 112.5 300 37.7
Aa31LG5G14830 Aethionema arabicum HOM05D004244 ORTHO05D004964 1.3e-22 111.3 258 37.2
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.3e-22 111.3 295 31.5
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 1.3e-22 111.3 188 42.0
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 2.8e-22 110.2 299 34.4
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 3.7e-22 109.8 258 37.6
Thhalv10021319m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 4.8e-22 109.4 241 40.7
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 6.2e-22 109.0 194 41.8
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 6.2e-22 109.0 182 39.0
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 8.2e-22 108.6 256 38.7
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 1.8e-21 107.5 178 42.1
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.4e-21 107.1 181 40.3
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 3.1e-21 106.7 185 39.5
C03p40780 Brassica napus HOM05D004244 ORTHO05D004964 4.0e-21 106.3 235 39.6
BolC3t16346H Brassica oleracea HOM05D004244 ORTHO05D004964 4.0e-21 106.3 235 39.6
BraA03t12533Z Brassica rapa HOM05D004244 ORTHO05D004964 4.0e-21 106.3 237 40.9
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 4.0e-21 106.3 185 40.0
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 5.3e-21 105.9 181 38.1
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.2e-20 104.8 187 40.6
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.5e-20 104.4 173 43.9
BcaC01g04379 Brassica carinata HOM05D004244 ORTHO05D004964 2.0e-20 104.0 235 39.6
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 2.6e-20 103.6 180 41.1
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 2.6e-20 103.6 184 40.2
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 4.5e-20 102.8 234 35.5
A03p33580 Brassica napus HOM05D004244 ORTHO05D004964 5.8e-20 102.4 235 39.6
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.0e-19 101.7 223 36.3
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 1.3e-19 101.3 183 38.3
BcaB04g19340 Brassica carinata HOM05D004244 ORTHO05D004964 1.3e-19 101.3 243 41.2
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 3.8e-19 99.8 223 35.9
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 3.8e-19 99.8 181 38.1
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 2.7e-17 93.6 290 34.8
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 2.7e-17 93.6 194 36.6
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.6e-17 92.8 183 35.0
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.6e-17 92.8 183 35.5
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.6e-17 92.8 183 35.5
AUR62000633 Chenopodium quinoa HOM05D004244 ORTHO05D004964 7.9e-17 92.0 183 40.4
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.3e-16 91.3 158 43.0
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 1.3e-16 91.3 235 32.8
AUR62006986 Chenopodium quinoa HOM05D004244 ORTHO05D004964 2.3e-16 90.5 173 40.5
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 6.7e-16 89.0 189 37.0
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 8.7e-16 88.6 158 41.8
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 1.1e-15 88.2 257 29.2
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 9.7e-15 85.1 166 41.0
SalBow1G6706 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.6e-14 84.3 196 36.7
Ah.06g187950 Amaranthus hybridus HOM05D004244 ORTHO05D004964 3.7e-14 83.2 132 39.4
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 4.8e-14 82.8 152 38.2
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 8.2e-14 82.0 255 30.2
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 8.2e-14 82.0 180 35.0
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 2.6e-12 77.0 119 44.5
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 1.0e-11 75.1 144 35.4
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 6.5e-11 72.4 195 34.4
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 1.4e-10 71.2 222 31.1
DCAR_030773 Daucus carota HOM05D004244 ORTHO05D004964 1.2e-09 68.2 146 38.4
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 4.6e-09 66.2 201 29.4
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 1.0e-08 65.1 115 33.9
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 3.0e-08 63.5 123 36.6
Sopen04g018350 Solanum pennellii HOM05D004244 ORTHO05D004964 3.0e-08 63.5 72 47.2
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 6.7e-08 62.4 184 33.2
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-07 61.6 119 34.5
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 1.3e-06 58.2 61 44.3
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 2.2e-06 57.4 247 27.5
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 8.2e-06 55.5 236 27.5


User provided reference genes

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