Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 7.4e-150 533.9 275 100.0
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 2.3e-127 459.1 269 86.6
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 5.2e-111 404.8 265 76.6
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 7.7e-107 391.0 265 72.5
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 1.7e-106 389.8 269 71.7
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 2.9e-106 389.0 269 71.4
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 3.8e-106 388.7 271 72.0
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 1.6e-104 383.3 292 70.9
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.6e-104 383.3 265 71.7
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 2.1e-104 382.9 266 72.6
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.1e-104 382.9 271 72.3
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 6.1e-104 381.3 271 70.8
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 8.0e-104 380.9 271 70.8
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 5.2e-103 378.3 271 70.8
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 1.2e-102 377.1 269 71.4
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 7.5e-102 374.4 265 70.9
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 9.8e-102 374.0 269 70.6
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 1.3e-101 373.6 269 71.0
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 2.9e-101 372.5 267 70.4
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 1.1e-100 370.5 271 69.4
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.4e-100 370.2 269 69.1
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 5.4e-100 368.2 266 69.9
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 2.7e-99 365.9 265 69.1
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 5.0e-98 361.7 266 69.2
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 5.0e-98 361.7 270 69.6
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 8.6e-98 360.9 270 68.5
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.1e-97 360.5 280 63.9
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.5e-97 360.1 265 67.9
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.5e-97 360.1 266 68.0
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 4.3e-97 358.6 266 68.4
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 4.7e-96 355.1 269 67.7
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 6.1e-96 354.8 272 69.1
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 1.0e-95 354.0 268 67.5
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 5.2e-95 351.7 272 68.8
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 6.8e-95 351.3 271 67.2
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.2e-94 350.5 270 67.0
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 2.0e-94 349.7 271 64.6
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 2.0e-94 349.7 229 75.5
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 2.6e-94 349.4 269 66.9
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.4e-94 348.6 267 67.4
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 9.8e-94 347.4 270 66.7
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 1.7e-93 346.7 267 66.7
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.2e-93 346.3 270 66.7
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 4.9e-93 345.1 269 67.7
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 4.9e-93 345.1 265 65.7
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 6.4e-93 344.7 274 66.1
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 6.4e-93 344.7 261 66.3
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 1.9e-92 343.2 269 64.3
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.4e-92 342.8 270 66.3
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 4.1e-92 342.0 255 69.0
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 7.0e-92 341.3 270 64.1
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 7.0e-92 341.3 272 65.1
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 2.0e-91 339.7 230 73.5
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 3.5e-91 339.0 279 63.1
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 7.8e-91 337.8 270 63.7
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 7.8e-91 337.8 270 63.7
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.0e-90 337.4 272 64.3
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 2.3e-90 336.3 270 63.3
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 3.0e-90 335.9 270 65.9
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 3.9e-90 335.5 269 63.9
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 3.9e-90 335.5 269 64.7
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 5.0e-90 335.1 269 63.2
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 6.6e-90 334.7 262 65.3
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 8.6e-90 334.3 253 67.2
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 8.6e-90 334.3 256 65.6
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 1.1e-89 334.0 270 65.2
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 1.1e-89 334.0 265 62.6
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 1.5e-89 333.6 246 66.7
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.9e-89 333.2 218 74.8
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 5.6e-89 331.6 270 65.6
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 6.2e-88 328.2 270 63.7
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 1.4e-87 327.0 269 62.8
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 6.8e-87 324.7 270 63.0
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 8.9e-87 324.3 282 62.1
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 8.9e-87 324.3 257 66.1
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 2.0e-86 323.2 274 62.0
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 2.6e-86 322.8 275 61.1
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 3.4e-86 322.4 274 62.0
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 7.5e-86 321.2 254 64.6
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.3e-85 320.5 235 67.2
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 2.2e-85 319.7 257 63.8
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 3.7e-85 318.9 276 60.5
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 8.3e-85 317.8 248 66.9
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 8.3e-85 317.8 253 64.4
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.1e-84 317.4 268 61.9
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 1.4e-84 317.0 233 66.5
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 5.4e-84 315.1 269 61.0
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 5.4e-84 315.1 240 66.7
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 7.1e-84 314.7 245 66.9
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 2.1e-83 313.2 284 59.5
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 2.7e-83 312.8 284 59.2
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 3.5e-83 312.4 271 59.8
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 2.8e-80 302.8 245 62.9
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 5.8e-78 295.0 237 63.3
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 7.6e-78 294.7 273 58.2
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 2.4e-76 289.7 243 63.8
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 1.6e-75 287.0 253 54.9
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.7e-74 283.5 270 56.7
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 6.6e-74 281.6 224 65.2
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 6.4e-69 265.0 172 75.6
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 2.5e-65 253.1 214 56.5
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.6e-64 250.4 166 72.3
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 1.4e-63 247.3 267 50.9
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 5.3e-63 245.4 154 77.3
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 9.0e-63 244.6 205 57.1
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 8.4e-61 238.0 247 51.8
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 9.3e-60 234.6 212 54.2
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.5e-59 232.6 271 49.8
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 4.6e-59 232.3 211 53.1
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 1.4e-55 220.7 167 64.7
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 4.0e-55 219.2 186 57.0
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 7.6e-54 214.9 251 46.6
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.3e-53 214.2 257 45.5
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 7.4e-49 198.4 130 81.5
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 9.6e-49 198.0 265 43.8
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 9.0e-47 191.4 220 52.3
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.4e-44 184.1 112 76.8
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 6.0e-43 178.7 234 46.2
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 1.0e-34 151.4 197 42.6
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 5.7e-33 145.6 109 66.1
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 4.1e-31 139.4 188 43.6
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 2.0e-30 137.1 130 55.4
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 1.4e-26 124.4 74 77.0
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-26 123.6 79 68.4
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-26 123.6 79 67.1
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 2.0e-25 120.6 79 67.1
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 1.8e-23 114.0 80 66.2
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 2.7e-19 100.1 103 56.3
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.6e-19 99.8 103 55.3
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.6e-19 99.8 103 55.3
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.4e-18 97.8 103 54.4
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.8e-18 97.4 103 54.4
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 2.6e-17 93.6 158 34.2
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 6.3e-16 89.0 80 60.0
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 1.2e-14 84.7 170 32.9
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 3.2e-12 76.6 52 69.2
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 2.1e-11 73.9 105 45.7
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 8.0e-11 72.0 130 37.7
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 1.0e-10 71.6 54 72.2
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 4.0e-10 69.7 60 65.0
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 1.5e-09 67.8 68 51.5
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 7.0e-07 58.9 214 26.6


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