Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G014388 Populus trichocarpa HOM05D000369 ORTHO05D332331 1.4e-31 139.0 70 100.0
Potri.019G014382 Populus trichocarpa HOM05D000369 ORTHO05D000253 1.8e-20 102.1 55 96.4
Potri.019G014386 Populus trichocarpa HOM05D000369 ORTHO05D000253 1.8e-20 102.1 55 96.4
Potri.019G014390 Populus trichocarpa HOM05D000369 ORTHO05D000253 8.0e-16 86.7 55 81.8
Potri.019G014384 Populus trichocarpa HOM05D000369 ORTHO05D000253 2.3e-15 85.1 55 80.0
Potri.019G014405 Populus trichocarpa HOM05D000369 ORTHO05D050486 3.7e-13 77.8 56 78.6
Sabra13G0041200 Salix brachista HOM05D000369 ORTHO05D000253 2.9e-10 68.2 56 73.2
Potri.019G014398 Populus trichocarpa HOM05D000369 ORTHO05D000253 6.1e-08 60.5 43 67.4
FvH4_2g34812 Fragaria vesca HOM05D000369 ORTHO05D000253 3.0e-07 58.2 38 63.2
TPR.G21274 Trifolium pratense HOM05D000369 ORTHO05D000253 3.0e-07 58.2 40 67.5
CANSAT01G1532 Cannabis sativa HOM05D000369 ORTHO05D000253 8.8e-07 56.6 38 68.4
Peaxi162Scf00916g00011 Petunia axillaris HOM05D000369 ORTHO05D000253 8.8e-07 56.6 45 64.4
Sabra19G0029000 Salix brachista HOM05D000369 ORTHO05D000253 8.8e-07 56.6 45 73.3
MBI06_g27711_MAGBIO Magnolia biondii HOM05D000369 ORTHO05D000253 1.5e-06 55.8 38 65.8
VMungo1215G0497 Vigna mungo HOM05D000369 ORTHO05D000253 1.5e-06 55.8 55 52.7
HanXRQChr09g0245751 Helianthus annuus HOM05D000369 ORTHO05D000253 2.0e-06 55.5 45 60.0
GSVIVG01028166001 Vitis vinifera HOM05D000369 ORTHO05D021513 2.0e-06 55.5 52 61.5
arahy.Tifrunner.gnm1.ann1.UQ67X3 Arachis hypogaea HOM05D000369 ORTHO05D021513 2.6e-06 55.1 47 63.8
CSS0043337 Camellia sinensis var. sinensis HOM05D000369 ORTHO05D000253 3.3e-06 54.7 38 68.4
CAN.G22.44 Capsicum annuum HOM05D000369 ORTHO05D000253 3.3e-06 54.7 38 65.8
Eucgr.A01188 Eucalyptus grandis HOM05D000369 ORTHO05D000253 3.3e-06 54.7 40 67.5
Eucgr.A01223 Eucalyptus grandis HOM05D000369 ORTHO05D000253 3.3e-06 54.7 40 67.5
Nn5g27775 Nelumbo nucifera HOM05D000369 ORTHO05D000253 3.3e-06 54.7 45 60.0
Os01g0898500 Oryza sativa ssp. japonica HOM05D000369 ORTHO05D000253 3.3e-06 54.7 45 62.2
Sabra02G0100200 Salix brachista HOM05D000369 ORTHO05D000253 3.3e-06 54.7 45 55.6
ClCG02G013180 Citrullus lanatus HOM05D000369 ORTHO05D000253 4.4e-06 54.3 40 65.0
Cc09_g02570 Coffea canephora HOM05D000369 ORTHO05D000253 4.4e-06 54.3 38 71.1
ECA232G4539 Erigeron canadensis HOM05D000369 ORTHO05D000253 4.4e-06 54.3 33 75.8
Eucgr.D02575 Eucalyptus grandis HOM05D000369 ORTHO05D000253 4.4e-06 54.3 45 60.0
Phvul.001G020100 Phaseolus vulgaris HOM05D000369 ORTHO05D000253 4.4e-06 54.3 54 55.6
Lsat_1_v5_gn_4_123961 Lactuca sativa HOM05D000369 ORTHO05D000253 5.7e-06 53.9 38 71.1
MD11G1099400 Malus domestica HOM05D000369 ORTHO05D000253 5.7e-06 53.9 45 62.2
Rhsim02G0245900 Rhododendron simsii HOM05D000369 ORTHO05D000253 5.7e-06 53.9 38 73.7
Rhsim05G0085300 Rhododendron simsii HOM05D000369 ORTHO05D000253 5.7e-06 53.9 38 71.1
Rhsim05G0085700 Rhododendron simsii HOM05D000369 ORTHO05D000253 5.7e-06 53.9 38 71.1
Rhsim05G0085800 Rhododendron simsii HOM05D000369 ORTHO05D000253 5.7e-06 53.9 38 71.1
TWI56G1106 Tripterygium wilfordii HOM05D000369 ORTHO05D000253 5.7e-06 53.9 38 68.4
Actinidia24793 Actinidia chinensis HOM05D000369 ORTHO05D000253 7.5e-06 53.5 38 68.4
Aqoxy1G03435 Aquilegia oxysepala HOM05D000369 ORTHO05D000253 7.5e-06 53.5 51 56.9
Aqoxy3G01909 Aquilegia oxysepala HOM05D000369 ORTHO05D000253 7.5e-06 53.5 50 58.0
Migut.E00477 Erythranthe guttata HOM05D000369 ORTHO05D000253 7.5e-06 53.5 40 57.5
MD11G1099600 Malus domestica HOM05D000369 ORTHO05D000253 7.5e-06 53.5 40 65.0
Peaxi162Scf00034g02718 Petunia axillaris HOM05D000369 ORTHO05D000253 7.5e-06 53.5 43 60.5
Sopen04g032850 Solanum pennellii HOM05D000369 ORTHO05D000253 7.5e-06 53.5 40 67.5
GSVIVG01028162001 Vitis vinifera HOM05D000369 ORTHO05D021513 7.5e-06 53.5 52 59.6
CiPaw.01G019800 Carya illinoinensis HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 71.1
Ca_28087_v3 Cicer arietinum L. HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 68.4
ClCG08G015670 Citrullus lanatus HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 68.4
MELO3C010888.2 Cucumis melo HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 68.4
CsaV3_2G017360 Cucumis sativus L. HOM05D000369 ORTHO05D000253 9.7e-06 53.1 49 61.2
CsaV3_2G028100 Cucumis sativus L. HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 68.4
HanXRQChr02g0038241 Helianthus annuus HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 71.1
HanXRQChr16g0507481 Helianthus annuus HOM05D000369 ORTHO05D000253 9.7e-06 53.1 33 75.8
Manes.12G102200 Manihot esculenta HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 63.2
Peaxi162Scf00964g00164 Petunia axillaris HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 71.1
Phvul.002G019700 Phaseolus vulgaris HOM05D000369 ORTHO05D000253 9.7e-06 53.1 42 59.5
Solyc04g079260.3 Solanum lycopersicum HOM05D000369 ORTHO05D000253 9.7e-06 53.1 40 65.0
GSVIVG01028160001 Vitis vinifera HOM05D000369 ORTHO05D021513 9.7e-06 53.1 33 72.7
Zm00001eb100970 Zea mays HOM05D000369 ORTHO05D000253 9.7e-06 53.1 38 68.4


User provided reference genes

Program Settings