Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 4.4e-56 221.1 115 100.0
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 1.6e-50 202.6 115 91.3
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 1.6e-50 202.6 115 91.3
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.9e-46 189.1 112 86.6
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 3.5e-45 184.9 115 83.5
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 1.0e-44 183.3 113 83.2
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 8.7e-44 180.3 112 82.1
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.6e-42 174.9 114 80.7
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.6e-42 174.9 114 80.7
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 8.1e-42 173.7 114 80.7
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.1e-41 173.3 114 82.5
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 1.1e-41 173.3 114 78.9
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 1.4e-41 172.9 114 75.4
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 6.9e-41 170.6 115 77.4
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 6.9e-41 170.6 113 77.9
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 9.0e-41 170.2 114 79.8
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.3e-39 166.4 108 79.6
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 2.2e-39 165.6 114 76.3
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 2.2e-39 165.6 119 77.3
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 3.8e-39 164.9 114 77.2
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 4.9e-39 164.5 115 74.8
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 4.9e-39 164.5 115 74.8
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 4.9e-39 164.5 115 74.8
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 6.4e-39 164.1 110 76.4
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 8.4e-39 163.7 106 77.4
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 1.1e-38 163.3 113 76.1
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 1.4e-38 162.9 115 74.8
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.9e-38 162.5 114 75.4
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 5.5e-38 161.0 113 77.0
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 5.5e-38 161.0 107 78.5
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 7.1e-38 160.6 106 77.4
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 7.1e-38 160.6 116 74.1
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 7.1e-38 160.6 112 75.0
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 9.3e-38 160.2 120 75.8
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.2e-37 159.8 104 78.8
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 1.6e-37 159.5 108 75.0
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.6e-37 159.5 114 74.6
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 2.1e-37 159.1 107 76.6
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 3.5e-37 158.3 113 74.3
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 4.6e-37 157.9 113 73.5
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 6.0e-37 157.5 114 72.8
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 7.9e-37 157.1 113 72.6
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.0e-36 156.8 113 73.5
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 1.0e-36 156.8 106 77.4
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.0e-36 156.8 107 74.8
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.3e-36 156.4 116 75.0
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 1.3e-36 156.4 119 73.9
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.3e-36 156.4 119 73.9
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.3e-36 156.4 119 73.9
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 1.8e-36 156.0 107 73.8
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 3.9e-36 154.8 107 72.9
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 6.7e-36 154.1 113 72.6
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 6.7e-36 154.1 106 76.4
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 6.7e-36 154.1 119 73.1
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.5e-35 152.9 98 79.6
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.9e-35 152.5 107 72.0
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 1.9e-35 152.5 115 68.7
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 1.9e-35 152.5 104 80.8
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 3.3e-35 151.8 107 73.8
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 3.3e-35 151.8 106 71.7
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 9.6e-35 150.2 115 73.9
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 9.6e-35 150.2 109 72.5
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 1.6e-34 149.4 113 71.7
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 1.6e-34 149.4 113 71.7
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 1.6e-34 149.4 108 75.9
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 2.1e-34 149.1 106 72.6
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 2.8e-34 148.7 116 72.4
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 3.7e-34 148.3 107 72.0
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 6.2e-34 147.5 108 72.2
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 6.2e-34 147.5 109 72.5
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 6.2e-34 147.5 107 72.9
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 8.1e-34 147.1 107 73.8
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 1.1e-33 146.7 114 67.5
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.1e-33 146.7 107 73.8
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.4e-33 146.4 119 69.7
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 1.8e-33 146.0 105 71.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 2.4e-33 145.6 108 68.5
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 3.1e-33 145.2 105 68.6
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.0e-33 144.8 109 69.7
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 4.0e-33 144.8 118 63.6
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 5.3e-33 144.4 124 65.3
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 6.9e-33 144.1 89 82.0
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 1.2e-32 143.3 112 71.4
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 1.2e-32 143.3 109 71.6
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 2.0e-32 142.5 105 66.7
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 5.8e-32 141.0 91 75.8
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.0e-31 140.2 108 70.4
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 1.7e-31 139.4 108 70.4
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.2e-31 139.0 112 67.0
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 2.9e-31 138.7 98 72.4
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 2.9e-31 138.7 108 70.4
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 6.5e-31 137.5 110 68.2
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.9e-30 136.0 88 76.1
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 5.5e-30 134.4 82 80.5
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 7.9e-29 130.6 114 66.7
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.0e-28 128.6 81 77.8
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.5e-27 126.3 82 78.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 4.1e-25 118.2 103 63.1
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 6.5e-23 110.9 84 67.9
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 6.5e-23 110.9 84 67.9
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 7.2e-22 107.5 85 63.5
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 4.6e-21 104.8 84 60.7
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 7.9e-21 104.0 126 50.0
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.3e-20 103.2 106 48.1
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 4.3e-19 98.2 82 64.6
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 4.3e-19 98.2 82 64.6
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 7.4e-19 97.4 83 66.3
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.6e-18 96.3 81 64.2
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 4.1e-17 91.7 116 48.3
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.1e-14 83.6 89 44.9
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 2.5e-14 82.4 58 70.7
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 3.2e-14 82.0 69 60.9
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 4.2e-14 81.6 61 62.3
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 7.2e-14 80.9 76 64.5
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 7.2e-14 80.9 81 55.6
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 1.2e-13 80.1 58 69.0
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 6.1e-13 77.8 58 65.5
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 3.9e-12 75.1 78 60.3
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 6.7e-12 74.3 66 53.0
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 6.7e-12 74.3 51 66.7
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 4.3e-11 71.6 66 53.0
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 4.8e-10 68.2 54 59.3
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 1.1e-09 67.0 45 75.6
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 2.9e-07 58.9 46 60.9
A09p05680 Brassica napus HOM05D006721 ORTHO05D000476 7.2e-06 54.3 28 92.9


User provided reference genes

Program Settings