Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G013302 Populus trichocarpa HOM05D000540 ORTHO05D009557 1.6e-42 175.6 84 100.0
Potri.013G137688 Populus trichocarpa HOM05D000540 ORTHO05D009557 2.7e-26 121.7 67 85.1
Lsat_1_v5_gn_3_22600 Lactuca sativa HOM05D000540 ORTHO05D000681 4.6e-26 120.9 79 72.2
Potri.005G154674 Populus trichocarpa HOM05D000540 ORTHO05D009557 7.8e-26 120.2 67 83.6
Potri.011G074301 Populus trichocarpa HOM05D000540 ORTHO05D009557 3.9e-25 117.9 67 83.6
HanXRQChr10g0318011 Helianthus annuus HOM05D000540 ORTHO05D009557 6.6e-25 117.1 71 76.1
Lsat_1_v5_gn_0_41560 Lactuca sativa HOM05D000540 ORTHO05D000681 6.6e-25 117.1 67 79.1
Lsat_1_v5_gn_5_50501 Lactuca sativa HOM05D000540 ORTHO05D009557 1.5e-24 115.9 67 79.1
DCAR_032526 Daucus carota HOM05D000540 ORTHO05D009557 1.9e-24 115.5 67 79.1
Hma1.2p1_0192F.1_g083730 Hydrangea macrophylla HOM05D000540 ORTHO05D009557 1.9e-24 115.5 66 80.3
Hma1.2p1_0247F.1_g101832 Hydrangea macrophylla HOM05D000540 ORTHO05D009557 1.9e-24 115.5 66 80.3
Hma1.2p1_0298F.1_g117734 Hydrangea macrophylla HOM05D000540 ORTHO05D009557 1.9e-24 115.5 66 80.3
Hma1.2p1_0818F.1_g223303 Hydrangea macrophylla HOM05D000540 ORTHO05D009557 1.9e-24 115.5 66 80.3
PGR111G0101 Punica granatum HOM05D000540 ORTHO05D009557 1.9e-24 115.5 67 77.6
PSO548G0068 Papaver somniferum HOM05D000540 ORTHO05D009557 3.3e-24 114.8 67 79.1
arahy.Tifrunner.gnm1.ann1.YHR3P6 Arachis hypogaea HOM05D000540 ORTHO05D009557 7.3e-24 113.6 67 77.6
Peaxi162Scf00299g00117 Petunia axillaris HOM05D000540 ORTHO05D009557 7.3e-24 113.6 67 79.1
Lalb_Chr25g0283401 Lupinus albus HOM05D000540 ORTHO05D009557 1.2e-23 112.8 67 74.6
Medtr3g035720 Medicago truncatula HOM05D000540 ORTHO05D009557 1.2e-23 112.8 67 76.1
Medtr4g051420 Medicago truncatula HOM05D000540 ORTHO05D009557 1.2e-23 112.8 67 76.1
MBI12_g23294_MAGBIO Magnolia biondii HOM05D000540 ORTHO05D009557 4.7e-23 110.9 71 76.1
CARHR282280 Cardamine hirsuta HOM05D000540 ORTHO05D009557 8.1e-23 110.2 67 73.1
MBI12_g26681_MAGBIO Magnolia biondii HOM05D002578 ORTHO05D009557 8.1e-23 110.2 64 81.2
C03p38140 Brassica napus HOM05D000540 ORTHO05D009557 1.8e-22 109.0 67 71.6
BolSC35t60674H Brassica oleracea HOM05D000540 ORTHO05D009557 1.8e-22 109.0 67 71.6
BolSC35t60725H Brassica oleracea HOM05D000540 ORTHO05D000681 1.8e-22 109.0 67 71.6
BraSC59t46567Z Brassica rapa HOM05D000540 ORTHO05D009557 1.8e-22 109.0 67 71.6
Gorai.004G123300 Gossypium raimondii HOM05D000540 ORTHO05D009557 6.8e-22 107.1 81 64.2
CARHR114570 Cardamine hirsuta HOM05D000540 ORTHO05D009557 8.9e-22 106.7 64 73.4
Gohir.A02G076002 Gossypium hirsutum HOM05D000540 ORTHO05D009557 8.9e-22 106.7 67 73.1
C09p40100 Brassica napus HOM05D000540 ORTHO05D000681 1.5e-21 105.9 67 70.1
BolC9t56905H Brassica oleracea HOM05D000540 ORTHO05D009557 5.8e-21 104.0 67 70.1
FvH4_6g09000 Fragaria vesca HOM05D000445 ORTHO05D000314 5.8e-21 104.0 57 84.2
Hund31045 Selenicereus undatus HOM05D000540 ORTHO05D000681 1.3e-20 102.8 85 60.0
Gohir.D04G028750 Gossypium hirsutum HOM05D000540 ORTHO05D009557 2.2e-20 102.1 63 76.2
Prupe.4G266600 Prunus persica HOM05D000540 ORTHO05D009557 8.3e-20 100.1 63 76.2
Aqoxy3G00098 Aquilegia oxysepala HOM05D000540 ORTHO05D009557 7.1e-19 97.1 62 69.4
Gohir.A12G089750 Gossypium hirsutum HOM05D000540 ORTHO05D009557 9.2e-19 96.7 58 75.9
Nn021s41517 Nelumbo nucifera HOM05D000540 ORTHO05D009557 1.6e-18 95.9 50 86.0
Nn070s42375 Nelumbo nucifera HOM05D000540 ORTHO05D009557 1.6e-18 95.9 50 86.0
Gohir.D05G303851 Gossypium hirsutum HOM05D000540 ORTHO05D009557 2.1e-18 95.5 50 88.0
Nn4g25228 Nelumbo nucifera HOM05D000540 ORTHO05D009557 4.6e-18 94.4 50 84.0
Nitab4.5_0001783g0160 Nicotiana tabacum HOM05D000540 ORTHO05D009557 4.6e-18 94.4 67 68.7
Gohir.D06G105033 Gossypium hirsutum HOM05D000540 ORTHO05D009557 6.0e-18 94.0 53 79.2
Glyma.18G078500 Glycine max HOM05D000540 ORTHO05D009557 7.8e-18 93.6 50 84.0
MBI12_g18826_MAGBIO Magnolia biondii HOM05D000540 ORTHO05D009557 1.0e-17 93.2 47 89.4
SMO086G0012 Selaginella moellendorffii HOM05D000540 ORTHO05D009557 1.0e-17 93.2 63 65.1
PSO541G1563 Papaver somniferum HOM05D000540 ORTHO05D009557 1.3e-17 92.8 81 53.1
RcHm_v2.0_CPg0501831 Rosa chinensis HOM05D000540 ORTHO05D009557 2.3e-17 92.0 50 82.0
Oeu028768.1 Olea europaea HOM05D000540 ORTHO05D009557 8.6e-17 90.1 50 82.0
PSO675G4368 Papaver somniferum HOM05D000540 ORTHO05D009557 8.6e-17 90.1 68 58.8
RcHm_v2.0_Chr1g0329571 Rosa chinensis HOM05D000540 ORTHO05D009557 8.6e-17 90.1 50 80.0
arahy.Tifrunner.gnm1.ann1.CR1XRQ Arachis hypogaea HOM05D003165 ORTHO05D009557 1.5e-16 89.4 48 81.2
AL1G45050 Arabidopsis lyrata HOM05D000540 ORTHO05D009557 3.3e-16 88.2 50 76.0
AL2G20510 Arabidopsis lyrata HOM05D000540 ORTHO05D009557 3.3e-16 88.2 50 76.0
BNapus_Darmor_BZH_scaffold_253p00380 Brassica napus HOM05D000540 ORTHO05D009557 3.3e-16 88.2 50 76.0
BolSC56t61244H Brassica oleracea HOM05D000540 ORTHO05D009557 3.3e-16 88.2 50 76.0
BraSC103t45442Z Brassica rapa HOM05D000540 ORTHO05D009557 3.3e-16 88.2 50 76.0
Medtr0002s0360 Medicago truncatula HOM05D000540 ORTHO05D000681 4.3e-16 87.8 73 58.9
Medtr0002s0800 Medicago truncatula HOM05D000540 ORTHO05D000681 4.3e-16 87.8 73 58.9
BolC7t41706H Brassica oleracea HOM05D000540 ORTHO05D009557 4.7e-15 84.3 50 72.0
RcHm_v2.0_Chr2g0118531 Rosa chinensis HOM05D000540 ORTHO05D009557 4.7e-15 84.3 50 78.0
Hund29685 Selenicereus undatus HOM05D002578 ORTHO05D009557 5.2e-14 80.9 48 77.1
Hund30542 Selenicereus undatus HOM05D002578 ORTHO05D009557 5.2e-14 80.9 48 77.1
Hund31295 Selenicereus undatus HOM05D002578 ORTHO05D009557 5.2e-14 80.9 48 77.1
PSO349G0315 Papaver somniferum HOM05D000540 ORTHO05D009557 2.0e-13 79.0 53 62.3
PSO675G7318 Papaver somniferum HOM05D000540 ORTHO05D009557 7.6e-13 77.0 53 62.3
CDE04G1374 Ceratophyllum demersum HOM05D000540 ORTHO05D009557 1.3e-12 76.3 62 51.6
CDE07G1014 Ceratophyllum demersum HOM05D000540 ORTHO05D009557 1.3e-12 76.3 62 51.6
Medtr8g038480 Medicago truncatula HOM05D000540 ORTHO05D009557 5.4e-11 70.9 39 79.5
Lsat_1_v5_gn_5_185760 Lactuca sativa HOM05D000540 ORTHO05D009557 2.1e-10 68.9 51 62.7
ECA236G4531 Erigeron canadensis HOM05D000540 ORTHO05D009557 3.5e-10 68.2 55 58.2
HanXRQChr11g0337241 Helianthus annuus HOM05D000540 ORTHO05D009557 7.8e-10 67.0 51 60.8
Lsat_1_v5_gn_7_110000 Lactuca sativa HOM05D000540 ORTHO05D009557 7.8e-10 67.0 51 60.8
Lj2P692T49 Lonicera japonica HOM05D000540 ORTHO05D009557 7.8e-10 67.0 45 68.9
HanXRQChr15g0494391 Helianthus annuus HOM05D000540 ORTHO05D009557 1.0e-09 66.6 65 52.3
Gorai.005G167500 Gossypium raimondii HOM05D000540 ORTHO05D009557 3.9e-09 64.7 53 60.4
Oeu025653.1 Olea europaea HOM05D000218 ORTHO05D000125 3.9e-09 64.7 56 50.0
Oeu011524.2 Olea europaea HOM05D000218 ORTHO05D000125 5.1e-09 64.3 56 50.0
MSTRG.19148 Avicennia marina HOM05D000218 ORTHO05D000125 8.7e-09 63.5 74 41.9
Haze_26884 Corylus avellana HOM05D000540 ORTHO05D000681 8.7e-09 63.5 66 40.9
Migut.J00430 Erythranthe guttata HOM05D000540 ORTHO05D009557 8.7e-09 63.5 64 48.4
Nitab4.5_0004376g0170 Nicotiana tabacum HOM05D002578 ORTHO05D009557 8.7e-09 63.5 36 80.6
SGA_v2.0_scaffold126G33916 Striga asiatica HOM05D000218 ORTHO05D000125 8.7e-09 63.5 56 48.2
Oeu001341.1 Olea europaea HOM05D000218 ORTHO05D000125 1.5e-08 62.8 56 50.0
Hund04059 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund19321 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund26846 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund27592 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund27964 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund28044 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund28461 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund28465 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund28634 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29039 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29219 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29502 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29527 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29546 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29570 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29607 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29614 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29663 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund29959 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund30110 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund30114 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund30274 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Hund30581 Selenicereus undatus HOM05D000540 ORTHO05D009557 1.5e-08 62.8 37 78.4
Nn6g34181 Nelumbo nucifera HOM05D000540 ORTHO05D009557 3.6e-07 58.2 58 51.7
unitig_699.g19584 Utricularia gibba HOM05D000218 ORTHO05D000125 6.2e-07 57.4 50 48.0
Prupe.2G123500 Prunus persica HOM05D000540 ORTHO05D008105 1.1e-06 56.6 74 43.2
MD07G1100000 Malus domestica HOM05D000540 ORTHO05D008105 2.4e-06 55.5 74 41.9
BraSC138t45550Z Brassica rapa HOM05D000540 ORTHO05D009557 3.1e-06 55.1 30 73.3
MD02G1217700 Malus domestica HOM05D000540 ORTHO05D008105 3.1e-06 55.1 74 41.9
Peaxi162Scf00211g00236 Petunia axillaris HOM05D000540 ORTHO05D000681 3.1e-06 55.1 28 85.7
Lalb_Chr10g0097221 Lupinus albus HOM05D000540 ORTHO05D008105 9.0e-06 53.5 66 42.4
RcHm_v2.0_Chr7g0212161 Rosa chinensis HOM05D000540 ORTHO05D008105 9.0e-06 53.5 66 43.9


User provided reference genes

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