Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 8.5e-108 393.7 196 100.0
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 4.1e-102 374.8 196 95.9
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 3.5e-101 371.7 196 95.4
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 5.7e-96 354.4 199 91.5
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.0e-92 343.6 201 88.6
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 7.0e-86 320.9 206 81.6
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 5.0e-84 314.7 196 81.6
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 9.5e-83 310.5 196 82.1
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 3.6e-82 308.5 197 80.7
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 6.1e-82 307.8 199 79.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 1.4e-81 306.6 196 78.6
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.0e-81 305.1 196 80.1
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.0e-81 305.1 196 80.1
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.5e-80 303.1 196 78.1
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.5e-80 303.1 196 78.1
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-80 302.8 196 78.1
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 2.0e-80 302.8 195 79.5
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.4e-80 302.0 196 78.1
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.4e-80 302.0 196 79.6
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 4.4e-80 301.6 197 79.2
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 5.8e-80 301.2 199 78.9
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.5e-80 300.8 196 77.0
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 7.5e-80 300.8 200 79.0
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 2.2e-79 299.3 201 76.6
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 2.9e-79 298.9 197 78.2
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 4.9e-79 298.1 196 80.1
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 6.4e-79 297.7 203 76.4
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 6.4e-79 297.7 199 77.9
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 8.3e-79 297.4 200 78.0
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 8.3e-79 297.4 197 76.1
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 8.3e-79 297.4 197 77.7
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.1e-78 297.0 196 77.0
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.1e-78 297.0 196 78.1
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.9e-78 296.2 202 75.2
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.4e-78 295.8 198 74.7
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 2.4e-78 295.8 197 78.2
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 4.6e-77 291.6 197 75.6
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 4.6e-77 291.6 201 75.6
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 7.8e-77 290.8 196 76.5
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 2.3e-76 289.3 199 74.9
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 1.1e-75 287.0 194 76.3
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 9.5e-75 283.9 203 72.4
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 2.1e-74 282.7 197 75.6
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 2.1e-74 282.7 207 73.4
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 2.8e-74 282.3 197 74.6
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 2.8e-74 282.3 196 71.4
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 2.8e-74 282.3 196 73.0
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 4.7e-74 281.6 199 76.4
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 4.7e-74 281.6 199 76.4
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.4e-73 280.0 196 72.4
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 1.8e-73 279.6 196 74.0
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 2.3e-73 279.3 196 73.5
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 5.2e-73 278.1 194 74.7
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 8.9e-73 277.3 200 75.0
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 8.9e-73 277.3 191 77.0
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 2.6e-72 275.8 199 71.4
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.4e-72 275.0 200 74.0
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.4e-72 275.0 200 74.0
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.4e-72 275.0 200 74.0
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 9.8e-72 273.9 184 75.5
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.7e-71 273.1 197 73.6
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.7e-71 273.1 196 70.4
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 2.9e-71 272.3 197 72.6
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 8.3e-71 270.8 201 71.1
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-70 270.4 201 71.1
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-70 270.4 201 71.1
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.1e-70 270.4 201 71.1
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.9e-70 269.6 196 71.4
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 2.4e-70 269.2 203 71.9
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.4e-70 269.2 200 71.0
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.4e-70 269.2 205 67.8
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.2e-70 268.9 216 68.5
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 3.2e-70 268.9 173 77.5
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 4.1e-70 268.5 182 74.2
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 1.6e-69 266.5 198 70.7
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.1e-69 266.2 198 70.7
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 6.0e-69 264.6 204 69.6
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 6.0e-69 264.6 204 69.6
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 7.8e-69 264.2 202 68.8
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 7.8e-69 264.2 200 70.5
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 3.9e-68 261.9 183 73.8
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 6.6e-68 261.2 198 70.7
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 3.3e-67 258.8 205 67.8
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 3.6e-66 255.4 207 67.1
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.8e-65 253.1 196 65.8
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 2.3e-65 252.7 181 69.6
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.1e-65 252.3 199 69.8
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.2e-64 250.4 196 68.9
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 4.4e-64 248.4 194 66.5
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 2.9e-63 245.7 204 64.2
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 3.7e-63 245.4 182 68.1
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.1e-62 243.8 188 67.6
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.1e-62 243.8 188 67.6
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 3.1e-57 225.7 171 69.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.0e-57 225.3 182 62.1
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 4.4e-56 221.9 168 69.6
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 9.9e-56 220.7 175 66.9
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.4e-54 216.9 153 72.5
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.2e-53 213.8 202 61.4
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 2.0e-48 196.4 145 69.7
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 2.4e-46 189.5 181 54.1
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.6e-42 176.8 181 50.8
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 5.8e-40 168.3 180 47.2
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 1.6e-37 160.2 105 75.2
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.1e-37 159.8 182 50.0
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 2.7e-37 159.5 194 44.3
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.0e-36 157.5 112 69.6
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.8e-36 156.8 112 69.6
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.4e-31 138.3 180 45.0
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 4.6e-29 132.1 121 57.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.8e-25 120.2 131 51.9
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 1.6e-18 97.1 78 64.1
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.4e-12 77.4 48 75.0
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 1.1e-11 74.3 58 69.0
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 5.7e-11 72.0 52 67.3
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.2e-06 55.1 36 66.7


User provided reference genes

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