Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 5.8e-150 534.3 284 100.0
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 2.5e-116 422.5 284 82.4
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 3.1e-90 335.9 282 70.2
Sabra19G0015300 Salix brachista HOM05D005305 ORTHO05D006394 2.0e-65 253.4 168 82.7
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 1.0e-40 171.4 192 56.2
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 2.9e-40 169.9 215 47.9
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 5.5e-39 165.6 186 53.2
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 5.5e-39 165.6 186 53.2
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 2.1e-38 163.7 176 57.4
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 1.8e-37 160.6 190 52.6
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 9.6e-36 154.8 179 49.2
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 4.8e-35 152.5 167 53.3
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 4.1e-34 149.4 258 44.6
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 6.9e-34 148.7 198 48.5
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 1.3e-32 144.4 259 43.2
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 2.9e-32 143.3 260 42.3
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 4.3e-28 129.4 169 46.7
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 6.3e-27 125.6 170 46.5
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 8.2e-27 125.2 165 46.7
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 1.8e-26 124.0 173 42.2
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 5.3e-26 122.5 190 43.2
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 2.0e-25 120.6 167 46.1
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 4.5e-25 119.4 165 45.5
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 5.9e-25 119.0 162 42.6
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 5.9e-25 119.0 166 45.8
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 5.0e-24 115.9 195 41.5
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 6.5e-24 115.5 236 37.3
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 4.2e-23 112.8 168 41.7
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.6e-22 110.9 168 41.7
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 4.6e-22 109.4 154 44.8
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 1.4e-21 107.8 185 40.0
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 1.8e-21 107.5 203 40.9
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 5.1e-21 105.9 187 36.4
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 1.5e-20 104.4 166 40.4
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 4.3e-20 102.8 168 41.7
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 4.3e-20 102.8 190 40.0
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 5.7e-20 102.4 197 38.1
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 5.7e-20 102.4 206 37.9
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 1.3e-19 101.3 207 36.2
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 1.7e-19 100.9 174 36.2
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 1.7e-19 100.9 247 35.6
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 3.7e-19 99.8 166 44.0
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 6.3e-19 99.0 168 39.9
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 1.1e-18 98.2 156 41.7
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 1.1e-18 98.2 168 39.3
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 1.1e-18 98.2 175 39.4
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 1.4e-18 97.8 213 38.5
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 1.4e-18 97.8 208 37.5
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.8e-18 97.4 168 39.9
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.8e-18 97.4 168 39.9
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 1.8e-18 97.4 177 39.5
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 4.1e-18 96.3 259 34.4
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 5.3e-18 95.9 166 41.0
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 5.3e-18 95.9 165 42.4
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 1.5e-17 94.4 168 39.3
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 1.5e-17 94.4 168 39.3
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 2.0e-17 94.0 185 40.5
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 2.0e-17 94.0 168 34.5
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 2.0e-17 94.0 247 34.0
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.6e-17 93.6 176 37.5
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 4.5e-17 92.8 168 39.3
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 5.9e-17 92.4 178 37.6
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 5.9e-17 92.4 166 40.4
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 7.7e-17 92.0 164 38.4
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 7.7e-17 92.0 186 35.5
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 1.0e-16 91.7 170 38.8
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 1.0e-16 91.7 199 36.2
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 1.3e-16 91.3 178 37.6
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 1.3e-16 91.3 178 37.6
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 1.3e-16 91.3 170 39.4
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 1.3e-16 91.3 154 38.3
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 1.7e-16 90.9 165 38.2
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 2.2e-16 90.5 166 39.2
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 2.2e-16 90.5 170 37.1
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 2.9e-16 90.1 231 33.3
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 2.9e-16 90.1 174 37.9
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 3.8e-16 89.7 166 39.2
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 5.0e-16 89.4 196 35.2
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 6.5e-16 89.0 154 40.3
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.5e-16 89.0 231 32.5
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 8.5e-16 88.6 161 37.9
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 8.5e-16 88.6 167 35.3
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 2.5e-15 87.0 176 36.9
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.2e-15 86.3 212 32.1
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 4.2e-15 86.3 166 38.6
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 4.2e-15 86.3 172 34.9
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 4.2e-15 86.3 186 34.4
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 4.2e-15 86.3 167 36.5
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 5.5e-15 85.9 170 38.2
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 7.2e-15 85.5 170 38.2
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 7.2e-15 85.5 170 38.2
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 7.2e-15 85.5 170 38.2
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 1.2e-14 84.7 170 37.6
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 1.2e-14 84.7 174 36.2
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.2e-14 84.7 170 39.4
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 1.6e-14 84.3 166 36.1
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 4.7e-14 82.8 170 34.7
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 4.7e-14 82.8 179 35.2
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 7.9e-14 82.0 166 35.5
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.4e-13 81.3 174 35.1
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.1e-12 78.2 176 35.2
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 2.6e-12 77.0 198 30.3
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-11 73.9 178 30.9
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 6.3e-11 72.4 177 33.3
Peaxi162Scf00025g00263 Petunia axillaris HOM05D005305 ORTHO05D006394 3.1e-10 70.1 119 41.2
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 4.1e-10 69.7 155 34.2
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.1e-10 68.6 174 32.8
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 3.5e-09 66.6 97 38.1
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 3.5e-09 66.6 174 32.2
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 1.0e-08 65.1 169 32.5
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-08 64.7 114 37.7
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.7e-08 64.3 108 35.2
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.2e-08 63.9 112 34.8
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.8e-08 63.2 114 36.8
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 8.5e-08 62.0 174 31.6
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 3.2e-07 60.1 167 32.3
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 9.4e-07 58.5 131 32.8
COL.COLO4_20450 Corchorus olitorius HOM05D002727 ORTHO05D002856 2.1e-06 57.4 132 31.8
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 3.6e-06 56.6 97 37.1
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 4.7e-06 56.2 150 28.7
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.0e-06 55.5 104 32.7
Nn1g04620 Nelumbo nucifera HOM05D005305 ORTHO05D006394 8.0e-06 55.5 90 37.8


User provided reference genes

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