Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.1e-52 211.1 177 100.0
Sabra19G0015000 Salix brachista HOM05D003347 ORTHO05D003821 6.2e-27 125.6 143 84.6
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.2e-24 117.1 167 53.3
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.2e-22 111.3 175 45.7
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 2.5e-20 103.6 175 55.4
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.4e-18 97.8 176 69.9
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 5.3e-18 95.9 150 52.7
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 1.2e-17 94.7 65 83.1
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.5e-17 94.4 156 49.4
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 7.6e-17 92.0 175 59.4
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.3e-16 91.3 159 56.0
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.3e-16 91.3 175 44.0
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 3.8e-16 89.7 158 50.0
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 1.1e-15 88.2 175 58.9
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 1.9e-15 87.4 148 55.4
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 2.4e-15 87.0 63 81.0
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 5.4e-15 85.9 64 73.4
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 1.2e-14 84.7 61 80.3
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 2.7e-14 83.6 64 71.9
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 4.6e-14 82.8 150 64.0
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 4.6e-14 82.8 80 68.8
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 6.0e-14 82.4 175 54.9
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 1.3e-13 81.3 160 63.1
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.8e-13 80.9 127 59.1
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.9e-13 79.7 82 68.3
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.9e-13 79.7 82 68.3
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 5.1e-13 79.3 176 57.4
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.7e-13 79.0 82 65.9
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 8.7e-13 78.6 65 70.8
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 1.1e-12 78.2 150 62.7
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.5e-12 77.8 175 41.1
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.9e-12 77.4 63 73.0
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 3.3e-12 76.6 174 55.2
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 4.3e-12 76.3 132 43.9
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 5.6e-12 75.9 158 50.6
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 5.6e-12 75.9 158 44.9
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 9.6e-12 75.1 175 52.6
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 1.3e-11 74.7 59 71.2
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.3e-11 74.7 64 64.1
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.6e-11 74.3 157 47.1
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 2.1e-11 73.9 64 65.6
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.7e-11 73.2 166 60.2
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 3.7e-11 73.2 156 48.1
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 3.7e-11 73.2 157 53.5
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 6.2e-11 72.4 158 56.3
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 6.2e-11 72.4 65 61.5
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 8.1e-11 72.0 65 64.6
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 8.1e-11 72.0 63 68.3
FvH4_1g25270 Fragaria vesca HOM05D003347 ORTHO05D003821 1.4e-10 71.2 175 58.9
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.4e-10 71.2 60 66.7
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.4e-10 71.2 156 50.0
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 1.8e-10 70.9 65 58.5
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 3.1e-10 70.1 64 60.9
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 3.1e-10 70.1 64 60.9
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 5.3e-10 69.3 159 56.0
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 5.3e-10 69.3 158 50.0
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 5.3e-10 69.3 82 52.4
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 6.9e-10 68.9 65 61.5
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 6.9e-10 68.9 65 60.0
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 1.2e-09 68.2 131 64.9
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.5e-09 67.8 131 59.5
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.5e-09 67.8 175 47.4
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 1.5e-09 67.8 65 61.5
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.6e-09 67.0 158 43.7
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 3.4e-09 66.6 158 43.7
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.5e-09 66.2 156 46.2
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 5.8e-09 65.9 168 56.5
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 7.6e-09 65.5 156 51.9
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 7.6e-09 65.5 62 59.7
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 7.6e-09 65.5 62 58.1
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 9.9e-09 65.1 156 50.6
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 9.9e-09 65.1 158 42.4
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 1.3e-08 64.7 158 52.5
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.3e-08 64.7 64 56.2
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.3e-08 64.7 64 56.2
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.3e-08 64.7 82 61.0
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 1.7e-08 64.3 135 51.9
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 3.8e-08 63.2 172 45.9
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 3.8e-08 63.2 49 73.5
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 8.4e-08 62.0 65 58.5
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.1e-07 61.6 157 45.2
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 1.1e-07 61.6 82 52.4
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.1e-07 61.6 63 54.0
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.4e-07 61.2 63 57.1
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.4e-07 61.2 156 50.6
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 2.4e-07 60.5 155 45.2
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.2e-07 60.1 61 55.7
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 9.3e-07 58.5 130 45.4
Manes.12G147600 Manihot esculenta HOM05D003347 ORTHO05D003821 9.3e-07 58.5 38 84.2
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 1.2e-06 58.2 156 52.6
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 1.2e-06 58.2 167 55.1
Mapoly0020s0030 Marchantia polymorpha HOM05D003347 ORTHO05D003821 1.6e-06 57.8 51 60.8
CARHR200100 Cardamine hirsuta HOM05D012923 ORTHO05D014747 2.1e-06 57.4 55 58.2
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 2.7e-06 57.0 156 49.4
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 3.5e-06 56.6 132 59.1
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 3.5e-06 56.6 156 59.0
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 6.0e-06 55.8 147 46.3
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 6.0e-06 55.8 150 53.3
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 7.9e-06 55.5 65 55.4


User provided reference genes

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