Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 3.0e-61 238.4 130 100.0
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.1e-55 219.9 130 92.3
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.8e-53 212.6 130 90.0
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 5.7e-52 207.6 130 83.8
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 8.3e-51 203.8 130 83.1
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 85.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.4e-50 202.2 130 83.8
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.4e-50 202.2 130 83.8
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 4.1e-50 201.4 130 82.3
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 82.0
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 81.5
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 82.0
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.6e-49 199.5 130 80.8
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 1.6e-49 199.5 130 82.3
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 81.2
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.0e-49 199.1 130 80.8
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.0
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 82.0
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 4.5e-49 198.0 128 82.0
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 81.2
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 80.5
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 81.5
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 80.5
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 80.5
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.9e-48 195.3 127 79.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 2.9e-48 195.3 126 81.7
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 2.9e-48 195.3 126 81.7
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 5.0e-48 194.5 128 78.9
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 6.6e-48 194.1 128 78.9
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.5e-47 193.0 130 77.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 1.5e-47 193.0 130 78.5
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 80.5
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 80.5
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 77.7
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 4.3e-47 191.4 128 78.9
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 78.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.6e-47 191.0 130 76.2
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 7.3e-47 190.7 130 77.7
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 9.5e-47 190.3 130 78.5
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 9.5e-47 190.3 128 78.9
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.6e-46 189.5 130 76.9
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.1e-46 189.1 130 76.9
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.1e-46 189.1 128 78.1
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.8e-46 188.7 122 80.3
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 2.8e-46 188.7 130 77.7
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 77.3
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 4.7e-46 188.0 130 77.7
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 77.3
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 8.0e-46 187.2 130 76.2
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 8.0e-46 187.2 127 75.6
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.0e-45 186.8 130 76.2
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.0e-45 186.8 130 75.4
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.0e-45 186.8 130 73.8
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.4e-45 186.4 125 78.4
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.4e-45 186.4 130 76.2
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 77.3
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 3.1e-45 185.3 130 78.5
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.1e-45 185.3 126 76.2
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.0e-45 184.9 127 75.6
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 4.0e-45 184.9 130 74.6
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 6.8e-45 184.1 128 75.0
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 6.8e-45 184.1 128 75.8
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 8.9e-45 183.7 134 76.1
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 8.9e-45 183.7 128 75.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.2e-44 183.3 128 75.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.0e-44 182.6 130 76.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.4e-44 181.4 130 73.1
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 4.4e-44 181.4 130 73.8
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 4.4e-44 181.4 130 73.1
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.8e-44 181.0 130 73.1
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 73.4
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 2.2e-43 179.1 128 72.7
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.9e-43 178.7 127 75.6
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.7e-43 178.3 121 76.9
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.1e-42 176.8 119 77.3
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.9e-42 176.0 126 71.4
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 2.4e-42 175.6 122 78.7
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 3.2e-42 175.3 128 72.7
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.2e-42 175.3 132 72.7
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.1e-42 174.9 120 76.7
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 4.1e-42 174.9 128 70.3
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.6e-41 172.9 112 81.2
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.5e-41 171.8 128 73.4
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.0e-40 170.2 131 73.3
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 2.5e-39 165.6 128 70.3
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 4.3e-39 164.9 125 73.6
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 7.3e-39 164.1 171 56.7
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 1.6e-38 162.9 119 73.1
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.3e-37 159.1 136 63.2
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 4.0e-37 158.3 103 81.6
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.6e-36 155.6 128 66.4
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 4.4e-36 154.8 128 65.6
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 4.4e-36 154.8 128 65.6
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 2.4e-34 149.1 185 51.9
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.2e-34 148.7 104 76.0
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 9.2e-34 147.1 103 73.8
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-33 146.7 116 69.0
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 3.5e-33 145.2 128 57.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 7.8e-33 144.1 128 58.6
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.7e-32 142.9 96 78.1
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 2.3e-32 142.5 98 74.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 8.6e-32 140.6 101 76.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 4.0e-29 131.7 92 75.0
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 3.2e-26 122.1 120 52.5
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.3e-24 115.9 92 67.4
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.3e-23 111.7 72 79.2
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 2.1e-22 109.4 94 63.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 3.1e-21 105.5 99 50.5
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 3.1e-21 105.5 92 64.1
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 3.1e-21 105.5 104 60.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-20 103.6 66 81.8
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.5e-20 103.2 93 62.4
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 2.4e-18 95.9 63 73.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 7.1e-18 94.4 62 77.4
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.7e-17 92.4 62 74.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.9e-16 88.6 62 72.6
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 1.1e-15 87.0 62 69.4
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 3.3e-15 85.5 64 68.8
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 7.3e-15 84.3 64 68.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.3e-14 83.6 57 80.7
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 7.1e-10 67.8 117 30.8
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 3.0e-08 62.4 115 32.2
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.9e-07 59.7 61 47.5
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.9e-07 59.7 74 52.7
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 3.3e-07 58.9 42 71.4


User provided reference genes

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