Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G145554 Populus trichocarpa HOM05D007656 ORTHO05D008529 1.8e-99 365.9 181 100.0
Potri.T044600 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.8e-49 199.1 206 58.3
Potri.018G145558 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.8e-49 198.4 206 58.7
Potri.T012000 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.6e-37 158.3 95 81.1
Potri.018G137900 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.0e-24 114.8 80 68.8
Potri.T046051 Populus trichocarpa HOM05D000101 ORTHO05D026078 4.6e-23 112.1 80 67.5
Potri.019G002800 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.0e-22 110.9 94 63.8
Sabra19G0000800 Salix brachista HOM05D007656 ORTHO05D008529 8.6e-22 107.8 94 63.8
Sabra19G0012300 Salix brachista HOM05D002390 ORTHO05D002846 1.9e-21 106.7 68 82.4
Potri.019G020500 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.3e-21 105.9 97 56.7
Sabra19G0012000 Salix brachista HOM05D007656 ORTHO05D008529 3.3e-21 105.9 68 82.4
Sabra19G0001900 Salix brachista HOM05D007656 ORTHO05D008529 7.3e-21 104.8 71 78.9
Potri.019G011169 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.5e-21 104.4 153 45.1
Potri.019G013140 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.6e-20 103.6 95 55.8
Sabra19G0010500 Salix brachista HOM05D007656 ORTHO05D008529 2.8e-20 102.8 68 80.9
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 1.1e-19 100.9 76 68.4
Potri.019G011826 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.2e-19 98.6 174 42.0
Potri.019G023300 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.2e-19 98.6 80 60.0
Potri.019G020102 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.4e-18 95.9 68 67.6
Potri.001G007501 Populus trichocarpa HOM05D007656 ORTHO05D008529 1.3e-17 94.0 74 73.0
Potri.019G009198 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.2e-17 93.2 95 52.6
Potri.019G014346 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.2e-17 93.2 84 57.1
Potri.018G136700 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-16 90.9 93 52.7
Potri.018G145572 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-16 90.9 93 52.7
Potri.019G014304 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.9e-16 90.1 84 56.0
Potri.019G014308 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.2e-16 89.4 81 56.8
Potri.019G014380 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.4e-16 88.6 93 52.7
Potri.018G135702 Populus trichocarpa HOM05D000101 ORTHO05D026078 1.2e-15 87.4 93 50.5
Sabra19G0011800 Salix brachista HOM05D007656 ORTHO05D008529 1.6e-15 87.0 99 57.6
Potri.018G145532 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.1e-15 86.7 82 53.7
Potri.018G145582 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.6e-15 85.5 87 49.4
Potri.T012900 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.8e-15 84.7 71 59.2
Sabra19G0011600 Salix brachista HOM05D007656 ORTHO05D008529 1.7e-14 83.6 69 72.5
Potri.018G145530 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-14 83.2 107 43.0
Potri.019G014338 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-14 83.2 84 54.8
Potri.T013300 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-14 83.2 107 43.0
Potri.011G127200 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.1e-14 82.0 110 41.8
Potri.019G014356 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.1e-14 82.0 95 46.3
Potri.019G014362 Populus trichocarpa HOM05D000101 ORTHO05D026078 8.6e-14 81.3 93 50.5
Potri.019G014328 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.9e-13 80.1 95 45.3
Potri.019G014372 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.5e-13 79.7 96 43.8
Potri.018G145566 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.6e-13 78.6 70 54.3
Potri.T023966 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.6e-13 77.8 78 53.8
Potri.018G145568 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.1e-12 76.6 78 48.7
Potri.T045000 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.1e-12 76.6 78 48.7
Potri.011G127300 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.8e-12 76.3 66 53.0
Potri.011G124100 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.6e-12 75.9 80 48.8
Potri.T044800 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.7e-12 75.5 93 46.2
Potri.018G136301 Populus trichocarpa HOM05D000101 ORTHO05D000089 6.2e-12 75.1 93 45.2
Manes.10G029900 Manihot esculenta HOM05D000101 ORTHO05D000089 8.1e-12 74.7 84 47.6
Potri.019G014332 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.1e-12 74.7 94 43.6
Potri.019G014336 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.1e-12 74.7 79 50.6
Potri.019G014324 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-11 74.3 96 42.7
Potri.019G014340 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-11 74.3 78 50.0
Potri.018G136500 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.8e-11 73.6 92 42.4
Potri.019G014358 Populus trichocarpa HOM05D019729 ORTHO05D026078 3.1e-11 72.8 97 42.3
Potri.019G014322 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.9e-11 71.2 78 48.7
Potri.001G405100 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.2e-10 70.9 75 49.3
Potri.018G135600 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.2e-10 70.9 92 42.4
Potri.001G404800 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.5e-10 70.5 80 43.8
Potri.018G023600 Populus trichocarpa HOM05D007656 ORTHO05D008529 2.0e-10 70.1 81 49.4
Potri.018G145556 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-10 70.1 64 53.1
Potri.T045200 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-10 70.1 92 41.3
Potri.T045300 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.4e-10 68.9 93 43.0
PGR142G0116 Punica granatum HOM05D015373 ORTHO05D017888 5.8e-10 68.6 90 44.4
Potri.018G145548 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.6e-10 68.2 64 51.6
Potri.T044500 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.6e-10 68.2 64 51.6
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 7.6e-10 68.2 84 41.7
Potri.001G405025 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.9e-10 67.8 80 41.2
PSO357G0552 Papaver somniferum HOM05D000023 ORTHO05D000014 1.7e-09 67.0 82 46.3
QL02p029416 Quercus lobata HOM05D000023 ORTHO05D000014 1.7e-09 67.0 77 48.1
Potri.017G035300 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.2e-09 66.6 78 46.2
PGR031G3431 Punica granatum HOM05D000023 ORTHO05D013319 2.9e-09 66.2 79 44.3
Sabra18G0026200 Salix brachista HOM05D007656 ORTHO05D008529 4.9e-09 65.5 71 50.7
Eucgr.E02336 Eucalyptus grandis HOM05D000023 ORTHO05D013319 6.4e-09 65.1 79 40.5
PGR031G1790 Punica granatum HOM05D000023 ORTHO05D013319 6.4e-09 65.1 90 42.2
PGR102G0219 Punica granatum HOM05D000023 ORTHO05D013319 8.4e-09 64.7 89 42.7
PGR102G1530 Punica granatum HOM05D000577 ORTHO05D003509 8.4e-09 64.7 89 42.7
QL10p062952 Quercus lobata HOM05D000009 ORTHO05D000008 8.4e-09 64.7 130 35.4
Sabra18G0026100 Salix brachista HOM05D007656 ORTHO05D008529 8.4e-09 64.7 71 49.3
Potri.019G014312 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.9e-08 63.5 66 50.0
PSO017G6863 Papaver somniferum HOM05D000023 ORTHO05D000014 3.2e-08 62.8 65 41.5
PSO081G0085 Papaver somniferum HOM05D000023 ORTHO05D000014 4.2e-08 62.4 61 44.3
Eucgr.E02624 Eucalyptus grandis HOM05D000023 ORTHO05D013832 5.4e-08 62.0 103 35.0
QL10p062588 Quercus lobata HOM05D000023 ORTHO05D000014 5.4e-08 62.0 77 46.8
PSO017G2031 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO017G5774 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO017G7056 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO339G4481 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO415G0001 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO541G3605 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO675G4560 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
PSO832G3933 Papaver somniferum HOM05D000023 ORTHO05D000014 9.3e-08 61.2 61 42.6
Eucgr.E02343 Eucalyptus grandis HOM05D000306 ORTHO05D013319 1.6e-07 60.5 79 41.8
Eucgr.E02626 Eucalyptus grandis HOM05D000023 ORTHO05D000014 1.6e-07 60.5 79 40.5
QL07p010595 Quercus lobata HOM05D000023 ORTHO05D000014 1.6e-07 60.5 63 52.4
QL10p062522 Quercus lobata HOM05D000023 ORTHO05D000014 1.6e-07 60.5 77 44.2
PSO765G0199 Papaver somniferum HOM05D000023 ORTHO05D000014 6.0e-07 58.5 61 41.0
Potri.006G267201 Populus trichocarpa HOM05D007656 ORTHO05D008529 1.3e-06 57.4 48 58.3
HanXRQChr05g0144091 Helianthus annuus HOM05D000023 ORTHO05D000014 1.7e-06 57.0 80 35.0
PGR119G2465 Punica granatum HOM05D000023 ORTHO05D013319 1.7e-06 57.0 62 41.9
PSO067G0044 Papaver somniferum HOM05D000023 ORTHO05D000014 2.3e-06 56.6 78 37.2
Potri.006G258250 Populus trichocarpa HOM05D007656 ORTHO05D008529 3.0e-06 56.2 48 58.3
QL10p064406 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-06 56.2 51 49.0
PSO384G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 3.9e-06 55.8 83 36.1
QL10p062237 Quercus lobata HOM05D000009 ORTHO05D000008 3.9e-06 55.8 57 49.1
QL10p064261 Quercus lobata HOM05D000009 ORTHO05D000008 3.9e-06 55.8 134 32.1
BcaC09g50181 Brassica carinata HOM05D000023 ORTHO05D000014 5.1e-06 55.5 59 49.2
BcaNung00312 Brassica carinata HOM05D000023 ORTHO05D000014 5.1e-06 55.5 59 49.2
A01p22550 Brassica napus HOM05D000023 ORTHO05D000014 5.1e-06 55.5 59 49.2
C01p28050 Brassica napus HOM05D000023 ORTHO05D000014 5.1e-06 55.5 59 49.2
BolC1t02739H Brassica oleracea HOM05D000023 ORTHO05D000014 5.1e-06 55.5 59 49.2
BraA01t02168Z Brassica rapa HOM05D000023 ORTHO05D000014 5.1e-06 55.5 59 49.2
Manes.04G033150 Manihot esculenta HOM05D000023 ORTHO05D000014 5.1e-06 55.5 98 37.8
Eucgr.B00464 Eucalyptus grandis HOM05D015373 ORTHO05D194259 6.6e-06 55.1 83 36.1
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 6.6e-06 55.1 109 33.9
CARHR098110 Cardamine hirsuta HOM05D000023 ORTHO05D000014 8.7e-06 54.7 62 48.4
Rhsim03G0197500 Rhododendron simsii HOM05D000023 ORTHO05D000014 8.7e-06 54.7 71 36.6


User provided reference genes

Program Settings