Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G145534 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.9e-51 204.9 101 100.0
Potri.018G145530 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.6e-33 146.0 108 75.0
Potri.T013300 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.6e-33 146.0 108 75.0
Potri.T013500 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.8e-30 135.2 77 89.6
Potri.018G145562 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-29 133.3 109 67.0
Potri.T044800 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.1e-29 131.3 109 66.1
Potri.T045375 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.9e-27 125.2 108 66.7
Potri.018G145566 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.4e-26 120.2 109 63.3
Potri.019G014370 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.4e-26 120.2 103 65.0
Potri.019G013140 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.2e-25 119.8 110 59.1
Potri.018G136700 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.6e-25 119.4 107 63.6
Potri.T045000 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.6e-25 119.4 112 61.6
Potri.018G135600 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.7e-25 118.6 111 61.3
Potri.019G014336 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.7e-25 118.6 105 62.9
Potri.019G014308 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.6e-25 118.2 105 62.9
Potri.019G014312 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.4e-24 116.3 105 63.8
Potri.018G145578 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-24 115.5 110 60.9
Potri.019G014360 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-24 115.5 105 61.0
Potri.019G014380 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.3e-24 115.5 105 61.9
Potri.018G136301 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.0e-24 115.2 111 61.3
Potri.019G014326 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.9e-24 114.8 105 60.0
Potri.T045200 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.9e-24 114.8 111 59.5
Potri.018G145532 Populus trichocarpa HOM05D000101 ORTHO05D000089 6.7e-24 114.0 111 58.6
Potri.019G014372 Populus trichocarpa HOM05D000101 ORTHO05D000089 6.7e-24 114.0 105 62.9
Potri.019G002800 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.8e-24 113.6 110 58.2
Potri.019G009198 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.8e-24 113.6 103 60.2
Potri.019G014364 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.8e-24 113.6 105 62.9
Potri.018G137900 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-23 113.2 109 61.5
Potri.018G145538 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-23 113.2 111 61.3
Potri.019G011826 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-23 113.2 105 62.9
Potri.T023966 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-23 113.2 111 61.3
Potri.018G136500 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.5e-23 112.8 108 62.0
Potri.019G014320 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-23 112.5 105 61.0
Potri.019G014328 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.3e-23 111.7 105 61.9
Potri.019G014324 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.3e-22 109.8 105 60.0
Potri.019G014346 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.7e-22 109.4 105 60.0
Potri.019G014334 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.7e-22 108.2 105 60.0
Potri.T046001 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.8e-22 107.8 107 58.9
Potri.019G014304 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.8e-21 105.9 106 61.3
Potri.019G014338 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.4e-21 105.5 105 61.0
Potri.T045300 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.4e-21 105.5 123 55.3
Potri.019G014352 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.1e-21 105.1 108 58.3
Potri.019G014356 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.1e-21 104.8 105 60.0
Potri.T012000 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.9e-20 100.9 113 56.6
Potri.019G014340 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.0e-19 100.1 105 57.1
Potri.019G023300 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.3e-19 99.8 105 58.1
Potri.019G011169 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.0e-19 97.8 105 57.1
Potri.019G014348 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.0e-19 97.8 105 58.1
Potri.011G127300 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-18 96.7 110 51.8
Potri.T011901 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-18 96.7 111 57.7
Potri.001G305200 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.1e-17 92.4 106 53.8
Potri.019G020102 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.0e-16 90.1 105 54.3
Potri.019G020500 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.4e-16 89.7 105 54.3
Potri.019G014318 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.2e-14 80.5 63 63.5
Gohir.D01G058200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.9e-12 74.3 87 49.4
Gorai.002G079000 Gossypium raimondii HOM05D000101 ORTHO05D000089 7.7e-12 73.9 87 49.4
Gohir.A01G071300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.5e-11 70.5 87 48.3
Potri.001G404800 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.2e-10 68.6 91 47.3
Potri.019G014322 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.2e-10 68.6 71 62.0
Thecc.07G062100 Theobroma cacao HOM05D000101 ORTHO05D000089 3.2e-10 68.6 80 50.0
Potri.011G127200 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.5e-10 67.8 96 49.0
Duzib170G0171 Durio zibethinus HOM05D000101 ORTHO05D000089 9.4e-10 67.0 85 45.9
Thecc.07G060700 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-09 66.6 81 49.4
Gorai.009G375100 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.1e-09 65.9 99 41.4
Duzib182G0003 Durio zibethinus HOM05D000101 ORTHO05D000089 3.6e-09 65.1 88 43.2
Thecc.07G061100 Theobroma cacao HOM05D000101 ORTHO05D000089 3.6e-09 65.1 80 50.0
Gohir.D05G347200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.7e-09 64.7 99 41.4
Thecc.07G060200 Theobroma cacao HOM05D000101 ORTHO05D000089 4.7e-09 64.7 80 46.2
COL.COLO4_16254 Corchorus olitorius HOM05D000101 ORTHO05D000089 6.1e-09 64.3 79 50.6
Potri.011G124000 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.0e-09 63.9 92 45.7
Gohir.A04G036100 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.0e-08 63.5 99 40.4
Duzib268G1572 Durio zibethinus HOM05D000101 ORTHO05D000089 1.8e-08 62.8 80 47.5
Gohir.A01G046050 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.8e-08 62.8 93 44.1
Thecc.07G057600 Theobroma cacao HOM05D000101 ORTHO05D000089 2.3e-08 62.4 80 47.5
Gohir.D01G036800 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.0e-08 62.0 86 45.3
Thecc.07G057800 Theobroma cacao HOM05D000101 ORTHO05D000089 3.0e-08 62.0 80 47.5
Thecc.07G137600 Theobroma cacao HOM05D000101 ORTHO05D000089 3.0e-08 62.0 89 43.8
Thecc.07G078100 Theobroma cacao HOM05D000101 ORTHO05D000089 4.0e-08 61.6 105 42.9
Potri.011G124100 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.2e-08 61.2 104 42.3
Thecc.07G062000 Theobroma cacao HOM05D000101 ORTHO05D000089 5.2e-08 61.2 80 47.5
Thecc.07G078300 Theobroma cacao HOM05D000101 ORTHO05D000089 5.2e-08 61.2 103 43.7
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 5.2e-08 61.2 97 43.3
Gorai.009G379500 Gossypium raimondii HOM05D000101 ORTHO05D000089 6.7e-08 60.8 99 43.4
Thecc.07G072300 Theobroma cacao HOM05D000101 ORTHO05D000089 6.7e-08 60.8 94 45.7
Thecc.07G091200 Theobroma cacao HOM05D000101 ORTHO05D000089 6.7e-08 60.8 82 50.0
Duzib268G1464 Durio zibethinus HOM05D000101 ORTHO05D000089 8.8e-08 60.5 80 46.2
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 1.1e-07 60.1 78 47.4
CAN.G1661.1 Capsicum annuum HOM05D000101 ORTHO05D000089 1.5e-07 59.7 82 47.6
MBI04_g21504_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.5e-07 59.7 78 42.3
Thecc.07G060900 Theobroma cacao HOM05D000101 ORTHO05D000089 1.5e-07 59.7 80 47.5
Thecc.07G061400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.5e-07 59.7 80 46.2
Thecc.07G061600 Theobroma cacao HOM05D000101 ORTHO05D000089 2.0e-07 59.3 86 44.2
Thecc.07G137200 Theobroma cacao HOM05D000101 ORTHO05D000089 2.0e-07 59.3 88 45.5
Duzib268G0383 Durio zibethinus HOM05D000101 ORTHO05D000089 2.6e-07 58.9 80 47.5
Gorai.002G044500 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.6e-07 58.9 86 46.5
CAN.G1661.7 Capsicum annuum HOM05D000101 ORTHO05D000089 3.3e-07 58.5 82 47.6
Duzib268G0201 Durio zibethinus HOM05D000101 ORTHO05D000089 4.4e-07 58.2 80 45.0
Duzib268G0689 Durio zibethinus HOM05D000101 ORTHO05D000089 4.4e-07 58.2 80 45.0
QL08p018471 Quercus lobata HOM05D000101 ORTHO05D000089 4.4e-07 58.2 89 42.7
TWI39G0378 Tripterygium wilfordii HOM05D000101 ORTHO05D000089 4.4e-07 58.2 79 48.1
Gohir.D05G353600 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.7e-07 57.8 98 40.8
Gorai.009G386400 Gossypium raimondii HOM05D000101 ORTHO05D000089 5.7e-07 57.8 98 40.8
Oeu059283.1 Olea europaea HOM05D000101 ORTHO05D000089 5.7e-07 57.8 97 38.1
Thecc.07G060300 Theobroma cacao HOM05D000101 ORTHO05D000089 7.5e-07 57.4 81 48.1
Thecc.07G078500 Theobroma cacao HOM05D000101 ORTHO05D000089 7.5e-07 57.4 103 41.7
Thecc.07G137400 Theobroma cacao HOM05D000101 ORTHO05D000089 7.5e-07 57.4 87 46.0
Actinidia19989 Actinidia chinensis HOM05D000101 ORTHO05D000089 9.7e-07 57.0 102 37.3
COL.COLO4_32230 Corchorus olitorius HOM05D000101 ORTHO05D000089 9.7e-07 57.0 84 44.0
Gohir.D05G360300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 9.7e-07 57.0 96 37.5
Manes.10G030001 Manihot esculenta HOM05D000101 ORTHO05D000089 9.7e-07 57.0 94 42.6
vmacro01920 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 9.7e-07 57.0 99 36.4
Dinv24616 Davidia involucrata HOM05D000101 ORTHO05D000089 1.3e-06 56.6 79 43.0
Gohir.D05G353400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.3e-06 56.6 85 41.2
Oeu010939.1 Olea europaea HOM05D000101 ORTHO05D000089 1.3e-06 56.6 85 40.0
Thecc.07G090800 Theobroma cacao HOM05D000101 ORTHO05D000089 1.3e-06 56.6 84 46.4
Duzib213G1018 Durio zibethinus HOM05D000101 ORTHO05D000089 1.7e-06 56.2 94 43.6
Thecc.07G072100 Theobroma cacao HOM05D000101 ORTHO05D000089 1.7e-06 56.2 89 42.7
Gorai.009G381300 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.2e-06 55.8 85 41.2
Thecc.07G091100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.2e-06 55.8 84 47.6
CAN.G639.26 Capsicum annuum HOM05D000101 ORTHO05D000089 2.8e-06 55.5 82 48.8
Gorai.002G044700 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.8e-06 55.5 88 40.9
Potri.T045350 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.8e-06 55.5 57 59.6
Thecc.07G061800 Theobroma cacao HOM05D000101 ORTHO05D000089 2.8e-06 55.5 77 45.5
Thecc.07G091000 Theobroma cacao HOM05D000101 ORTHO05D000089 2.8e-06 55.5 84 45.2
Gohir.A04G033550 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.7e-06 55.1 85 42.4
Gorai.009G380300 Gossypium raimondii HOM05D000101 ORTHO05D000089 3.7e-06 55.1 93 41.9
Thecc.03G040300 Theobroma cacao HOM05D000101 ORTHO05D000089 3.7e-06 55.1 88 44.3
Gorai.009G432400 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.8e-06 54.7 96 35.4
Potri.001G405100 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.8e-06 54.7 91 41.8
CAN.G261.9 Capsicum annuum HOM05D000101 ORTHO05D000089 6.3e-06 54.3 89 43.8
CAN.G9370.1 Capsicum annuum HOM05D000101 ORTHO05D000089 6.3e-06 54.3 82 43.9
Duzib213G0218 Durio zibethinus HOM05D000101 ORTHO05D000089 6.3e-06 54.3 86 41.9
Gohir.D05G350600 Gossypium hirsutum HOM05D000101 ORTHO05D000089 6.3e-06 54.3 93 41.9
Gohir.D05G351100 Gossypium hirsutum HOM05D000101 ORTHO05D000089 6.3e-06 54.3 85 40.0
Gorai.002G044900 Gossypium raimondii HOM05D000101 ORTHO05D000089 6.3e-06 54.3 89 37.1
QL12p023642 Quercus lobata HOM05D000101 ORTHO05D000089 6.3e-06 54.3 86 45.3
Thecc.07G072400 Theobroma cacao HOM05D000101 ORTHO05D000089 6.3e-06 54.3 82 43.9
Atru.chr2.2804 Acer truncatum HOM05D000101 ORTHO05D000089 8.2e-06 53.9 84 42.9
HanXRQChr02g0046161 Helianthus annuus HOM05D000101 ORTHO05D000089 8.2e-06 53.9 92 41.3
Medtr7g018660 Medicago truncatula HOM05D000101 ORTHO05D000089 8.2e-06 53.9 79 39.2
Rhsim11G0146700 Rhododendron simsii HOM05D000101 ORTHO05D000089 8.2e-06 53.9 92 32.6
Thecc.07G077900 Theobroma cacao HOM05D000101 ORTHO05D000089 8.2e-06 53.9 92 41.3
Thecc.07G078900 Theobroma cacao HOM05D000101 ORTHO05D000089 8.2e-06 53.9 103 40.8
vmacro01919 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 8.2e-06 53.9 98 37.8


User provided reference genes

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