Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.2e-93 345.5 162 100.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.7e-83 312.0 162 90.7
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.7e-82 309.3 162 90.1
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.0e-82 308.5 162 87.7
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.5e-81 305.4 162 87.7
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.6e-81 303.5 162 87.0
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.6e-81 303.5 162 88.3
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.3e-80 303.1 161 86.3
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 6.2e-80 300.8 162 85.8
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 5.3e-79 297.7 157 86.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 9.0e-79 297.0 161 84.5
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.6e-78 295.4 161 83.9
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 4.4e-78 294.7 162 84.6
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 4.4e-78 294.7 162 84.0
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 5.8e-78 294.3 156 87.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 7.6e-78 293.9 162 83.3
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 9.9e-78 293.5 157 85.4
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.7e-77 292.7 157 86.0
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 2.2e-77 292.4 162 82.7
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.2e-77 292.4 162 84.6
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.2e-77 292.4 157 83.4
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.2e-77 292.4 157 83.4
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.9e-77 292.0 157 86.0
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.9e-77 292.0 163 85.3
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 3.8e-77 291.6 157 84.7
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 3.8e-77 291.6 162 83.3
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 4.9e-77 291.2 157 84.7
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 4.9e-77 291.2 163 84.7
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 6.4e-77 290.8 161 84.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.1e-76 290.0 157 84.1
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.9e-76 289.3 157 84.7
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 2.4e-76 288.9 157 82.8
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.2e-76 288.5 152 88.8
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 3.2e-76 288.5 160 82.5
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.2e-76 288.1 162 81.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 4.2e-76 288.1 162 81.5
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 7.1e-76 287.3 162 81.5
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 9.3e-76 287.0 153 86.3
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.7e-75 285.4 157 82.8
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 83.4
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 82.8
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 3.5e-75 285.0 162 80.9
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 83.4
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 82.8
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 82.8
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 4.6e-75 284.6 162 80.2
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.6e-75 284.6 155 83.9
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 4.6e-75 284.6 155 83.9
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 4.6e-75 284.6 157 84.1
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 6.0e-75 284.3 154 82.5
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 6.0e-75 284.3 157 83.4
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.0e-74 283.5 162 79.6
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 80.1
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.3e-74 283.1 162 79.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.3e-74 283.1 157 82.8
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 1.3e-74 283.1 162 80.2
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.7e-74 282.7 156 83.3
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.7e-74 282.7 156 83.3
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.7e-74 282.7 156 83.3
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.7e-74 282.7 155 83.2
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 3.0e-74 282.0 162 80.2
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 3.9e-74 281.6 162 79.0
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 3.9e-74 281.6 157 81.5
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.5e-73 279.6 154 83.1
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.9e-73 279.3 157 79.6
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.9e-73 279.3 157 82.2
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.9e-73 279.3 155 83.9
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 2.5e-73 278.9 157 82.2
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 162 79.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.3e-73 278.1 157 79.0
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 5.6e-73 277.7 157 82.2
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 7.4e-73 277.3 162 77.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 7.4e-73 277.3 154 80.5
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 7.4e-73 277.3 154 81.2
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.3e-72 276.6 170 76.5
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 2.8e-72 275.4 157 79.6
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 6.2e-72 274.2 168 76.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.1e-71 273.5 156 78.8
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.4e-71 273.1 163 79.1
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 3.1e-71 271.9 157 76.4
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 2.0e-70 269.2 210 62.9
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.6e-70 268.9 156 78.2
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.6e-70 268.9 149 85.2
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 7.6e-70 267.3 157 79.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 6.4e-69 264.2 157 77.7
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 8.4e-69 263.8 163 75.5
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 8.4e-69 263.8 162 75.3
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.1e-68 263.5 162 79.0
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.1e-68 263.5 155 74.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.9e-68 262.7 156 76.9
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 4.2e-68 261.5 148 77.7
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.6e-67 259.6 155 73.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 4.6e-67 258.1 157 78.3
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 5.1e-66 254.6 163 72.4
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 2.5e-65 252.3 137 82.5
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 3.3e-65 251.9 148 75.0
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 4.3e-65 251.5 135 83.7
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 6.2e-64 247.7 135 82.2
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.4e-63 246.5 135 83.7
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.0e-62 242.7 157 69.4
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 1.0e-61 240.4 138 79.0
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.4e-60 236.5 152 75.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.4e-60 236.5 138 79.7
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.4e-60 236.5 183 66.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.5e-60 235.7 117 94.0
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 4.8e-56 221.5 116 84.5
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.3e-53 213.4 152 62.5
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 3.2e-52 208.8 116 80.2
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.5e-52 208.0 116 82.8
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 7.2e-52 207.6 142 62.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.0e-50 203.8 114 80.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.1e-50 201.4 156 65.4
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 8.7e-50 200.7 121 77.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.1e-49 200.3 142 60.6
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 1.5e-49 199.9 106 87.7
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.4e-47 193.4 133 68.4
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.4e-46 188.7 114 73.7
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.6e-43 179.9 96 81.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.6e-43 179.9 95 85.3
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 4.8e-40 168.3 157 59.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.8e-39 166.4 102 71.6
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.6e-38 162.5 85 88.2
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.4e-36 156.8 135 60.7
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 3.2e-36 155.6 132 56.1
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 6.1e-35 151.4 86 82.6
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 4.0e-26 122.1 67 83.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 2.2e-21 106.3 53 86.8
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-16 90.1 61 70.5
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 2.2e-08 63.2 72 47.2


User provided reference genes

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