Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.5e-238 829.3 472 100.0
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 6.7e-167 591.3 429 82.8
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 5.0e-138 495.4 488 64.3
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 7.5e-134 481.5 475 64.8
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 2.1e-75 287.3 551 45.0
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 7.9e-67 258.8 581 40.3
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.8e-66 257.7 516 44.0
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.3e-64 251.5 509 43.2
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 9.0e-63 245.4 466 44.8
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 2.6e-62 243.8 472 42.6
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 3.4e-62 243.4 508 40.6
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 6.5e-61 239.2 496 39.3
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 4.6e-59 233.0 499 41.1
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 2.3e-58 230.7 496 41.1
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 6.9e-55 219.2 258 55.4
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 2.0e-54 217.6 481 40.1
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 2.9e-53 213.8 593 37.4
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.4e-50 204.9 579 37.7
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.3e-50 204.1 456 38.2
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 3.9e-50 203.4 472 39.8
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 2.8e-48 197.2 490 38.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.7e-48 196.8 469 38.2
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 6.3e-48 196.1 520 35.2
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.4e-47 194.9 471 38.2
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 3.1e-47 193.7 512 37.5
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 5.3e-47 193.0 157 68.8
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 2.6e-46 190.7 472 37.1
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 3.4e-46 190.3 506 35.8
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 1.3e-45 188.3 504 36.1
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 1.1e-44 185.3 196 58.7
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 1.1e-44 185.3 498 35.7
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 3.2e-44 183.7 510 35.7
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 4.2e-44 183.3 470 36.8
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.2e-43 181.8 173 62.4
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 2.7e-43 180.6 471 36.3
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 3.6e-43 180.3 473 37.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 4.7e-43 179.9 475 38.1
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 6.1e-43 179.5 460 35.7
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 7.9e-43 179.1 472 39.4
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 3.9e-42 176.8 499 36.5
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 8.8e-42 175.6 163 63.8
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 8.8e-42 175.6 163 63.8
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.1e-41 175.3 481 37.4
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 1.5e-41 174.9 163 63.8
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 5.7e-41 172.9 518 32.8
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 3.7e-40 170.2 281 45.9
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 4.8e-40 169.9 154 63.0
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 3.1e-39 167.2 258 48.4
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 4.1e-39 166.8 510 37.3
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 9.1e-39 165.6 221 47.1
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.2e-38 165.2 513 35.9
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 2.0e-38 164.5 488 34.6
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 5.9e-38 162.9 161 60.2
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.3e-37 161.8 470 37.4
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 2.2e-37 161.0 477 34.6
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 2.9e-37 160.6 247 49.0
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 3.8e-37 160.2 529 33.5
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.4e-36 158.3 463 36.9
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 3.2e-36 157.1 291 42.6
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 4.2e-36 156.8 473 34.5
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 5.5e-36 156.4 309 39.8
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 5.5e-36 156.4 473 35.3
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 5.5e-36 156.4 473 35.3
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 5.5e-36 156.4 470 33.4
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 9.4e-36 155.6 117 71.8
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 2.7e-35 154.1 461 39.9
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 6.1e-35 152.9 489 35.4
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 8.0e-35 152.5 430 34.0
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 1.0e-34 152.1 116 69.0
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 1.4e-34 151.8 108 71.3
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 2.3e-34 151.0 115 70.4
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 2.3e-34 151.0 115 70.4
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 2.3e-34 151.0 115 70.4
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 5.2e-34 149.8 464 35.3
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 6.7e-34 149.4 567 34.6
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 6.7e-34 149.4 466 36.1
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 6.7e-34 149.4 476 33.6
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 8.8e-34 149.1 462 34.4
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 2.0e-33 147.9 116 71.6
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.0e-33 147.9 475 34.1
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 3.3e-33 147.1 124 67.7
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 3.3e-33 147.1 88 81.8
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 9.7e-33 145.6 133 63.9
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 9.7e-33 145.6 493 34.7
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 1.3e-32 145.2 137 59.9
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 1.3e-32 145.2 137 59.9
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.2e-32 144.4 153 56.9
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 8.2e-32 142.5 473 32.6
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.1e-31 142.1 493 33.1
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 2.4e-31 141.0 482 30.7
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 4.1e-31 140.2 208 47.6
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 7.0e-31 139.4 477 33.1
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 7.0e-31 139.4 126 60.3
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 2.0e-30 137.9 470 35.1
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 4.5e-30 136.7 463 31.7
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 5.9e-30 136.3 200 46.5
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 7.7e-30 136.0 179 51.4
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 6.5e-29 132.9 261 45.6
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.9e-28 131.3 285 40.0
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.5e-28 131.0 162 52.5
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 5.5e-28 129.8 457 33.7
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 1.2e-27 128.6 470 32.1
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 2.1e-27 127.9 476 33.6
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.1e-27 127.9 532 31.6
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 3.6e-27 127.1 439 35.1
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.0e-26 125.6 430 33.0
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 3.0e-26 124.0 161 51.6
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 3.0e-26 124.0 161 51.6
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 4.0e-26 123.6 512 32.8
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 6.8e-26 122.9 138 54.3
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 2.0e-25 121.3 214 43.5
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 4.4e-25 120.2 463 30.2
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 5.7e-25 119.8 466 32.2
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 1.3e-24 118.6 141 47.5
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 2.8e-24 117.5 143 46.9
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 3.1e-23 114.0 93 67.7
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 4.1e-23 113.6 501 33.5
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 1.2e-22 112.1 102 64.7
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 1.6e-22 111.7 475 30.3
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 2.7e-22 110.9 102 64.7
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 7.7e-22 109.4 458 30.8
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.1e-20 105.5 62 80.6
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-19 102.1 73 67.1
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 2.0e-17 94.7 415 30.8
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 2.1e-11 74.7 252 34.9
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 2.8e-11 74.3 55 65.5
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 4.7e-11 73.6 95 52.6
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 1.5e-09 68.6 82 54.9
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.4e-09 67.0 421 27.3
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.8e-07 61.6 35 77.1
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.8e-07 61.6 35 77.1
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.1e-07 60.5 414 28.5
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 4.5e-06 57.0 72 52.8
Oeu003868.2 Olea europaea HOM05D005890 ORTHO05D006717 5.9e-06 56.6 186 33.3


User provided reference genes

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