Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G131900 Populus trichocarpa HOM05D002570 ORTHO05D002689 3.6e-62 241.5 129 100.0
Sabra06G0052300 Salix brachista HOM05D002570 ORTHO05D002689 3.6e-38 161.8 133 66.9
Potri.006G070200 Populus trichocarpa HOM05D002570 ORTHO05D002689 6.8e-37 157.5 133 71.4
Dinv25488 Davidia involucrata HOM05D002570 ORTHO05D002689 3.2e-18 95.5 99 51.5
arahy.Tifrunner.gnm1.ann1.G00P8D Arachis hypogaea HOM05D002570 ORTHO05D002689 1.4e-13 80.1 80 56.2
FvH4_4g06680 Fragaria vesca HOM05D030384 ORTHO05D002689 1.4e-13 80.1 90 48.9
FAN12G3444 Fragaria x ananassa HOM05D030384 ORTHO05D002689 1.4e-13 80.1 90 48.9
Cfa013397 Carpinus fangiana HOM05D002570 ORTHO05D002689 2.3e-13 79.3 106 42.5
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 1.2e-12 77.0 103 44.7
TPR.G27566 Trifolium pratense HOM05D002570 ORTHO05D002689 2.6e-12 75.9 109 41.3
FAN22G1225 Fragaria x ananassa HOM05D002570 ORTHO05D002689 3.4e-12 75.5 64 57.8
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 5.8e-12 74.7 103 43.7
arahy.Tifrunner.gnm1.ann1.ANT7GU Arachis hypogaea HOM05D002570 ORTHO05D002689 9.8e-12 73.9 77 54.5
Gohir.A05G143000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.3e-11 73.6 104 47.1
Lj4g0013925 Lotus japonicus HOM05D002570 ORTHO05D002689 2.2e-11 72.8 109 42.2
Gohir.D05G145400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 2.9e-11 72.4 104 46.2
Gorai.009G149300 Gossypium raimondii HOM05D002570 ORTHO05D002689 2.9e-11 72.4 104 46.2
Lalb_Chr12g0199761 Lupinus albus HOM05D002570 ORTHO05D002689 6.4e-11 71.2 92 45.7
Medtr4g126400 Medicago truncatula HOM05D002570 ORTHO05D002689 6.4e-11 71.2 115 40.0
Duzib251G0386 Durio zibethinus HOM05D002570 ORTHO05D002689 8.3e-11 70.9 98 42.9
Psat4g014680 Pisum sativum HOM05D002570 ORTHO05D002689 8.3e-11 70.9 104 41.3
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 1.1e-10 70.5 100 44.0
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 1.4e-10 70.1 103 41.7
Manes.11G071400 Manihot esculenta HOM05D002570 ORTHO05D002689 1.9e-10 69.7 103 40.8
Phvul.003G137400 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 1.9e-10 69.7 68 54.4
VMungo1215G3302 Vigna mungo HOM05D002570 ORTHO05D002689 2.4e-10 69.3 109 42.2
Duzib192G0671 Durio zibethinus HOM05D002570 ORTHO05D002689 3.2e-10 68.9 103 42.7
Glyma.17G055600 Glycine max HOM05D002570 ORTHO05D002689 5.4e-10 68.2 109 42.2
SalBow1G2645 Salvia bowleyana HOM05D002570 ORTHO05D002689 5.4e-10 68.2 72 48.6
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 7.0e-10 67.8 102 42.2
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 7.0e-10 67.8 102 42.2
Hma1.2p1_1208F.1_g267175 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 7.0e-10 67.8 100 42.0
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 9.2e-10 67.4 101 39.6
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 2.0e-09 66.2 100 42.0
Oeu033446.1 Olea europaea HOM05D002570 ORTHO05D002689 2.0e-09 66.2 70 50.0
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 2.0e-09 66.2 101 40.6
TWI60G0727 Tripterygium wilfordii HOM05D002570 ORTHO05D002689 2.0e-09 66.2 107 42.1
Prupe.1G069600 Prunus persica HOM05D002570 ORTHO05D002689 2.7e-09 65.9 67 46.3
QL05p081283 Quercus lobata HOM05D002570 ORTHO05D002689 2.7e-09 65.9 100 44.0
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 3.5e-09 65.5 100 40.0
Gohir.D10G050000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 3.5e-09 65.5 103 40.8
Gorai.011G053600 Gossypium raimondii HOM05D002570 ORTHO05D002689 3.5e-09 65.5 103 40.8
Ciclev10010203m.g Citrus clementina HOM05D002570 ORTHO05D002689 4.6e-09 65.1 93 40.9
Glyma.13G103400 Glycine max HOM05D002570 ORTHO05D002689 4.6e-09 65.1 111 46.8
Gohir.A10G049400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 4.6e-09 65.1 103 40.8
Gohir.D12G159000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 4.6e-09 65.1 98 43.9
Peaxi162Scf00314g00938 Petunia axillaris HOM05D002570 ORTHO05D002689 4.6e-09 65.1 97 40.2
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 4.6e-09 65.1 101 38.6
Rhsim08G0200900 Rhododendron simsii HOM05D002570 ORTHO05D002689 6.0e-09 64.7 99 40.4
TAR383G0799 Trochodendron aralioides HOM05D002570 ORTHO05D002689 7.8e-09 64.3 102 41.2
vmacro19088 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 7.8e-09 64.3 100 40.0
Thecc.02G311400 Theobroma cacao HOM05D002570 ORTHO05D002689 1.0e-08 63.9 57 56.1
MSTRG.22832 Avicennia marina HOM05D002570 ORTHO05D002689 1.3e-08 63.5 69 46.4
Gohir.A12G155900 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.3e-08 63.5 98 42.9
FAN17G2389 Fragaria x ananassa HOM05D030384 ORTHO05D002689 1.7e-08 63.2 68 47.1
CAN.G1008.23 Capsicum annuum HOM05D002570 ORTHO05D002689 2.3e-08 62.8 101 37.6
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 3.0e-08 62.4 98 38.8
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 3.0e-08 62.4 98 38.8
Migut.D01154 Erythranthe guttata HOM05D002570 ORTHO05D002689 3.0e-08 62.4 69 46.4
Dinv23257 Davidia involucrata HOM05D002570 ORTHO05D002689 3.9e-08 62.0 100 40.0
Gorai.008G172100 Gossypium raimondii HOM05D002570 ORTHO05D002689 5.0e-08 61.6 98 42.9
MBI14_g19442_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 5.0e-08 61.6 73 46.6
MSTRG.11212 Avicennia marina HOM05D002570 ORTHO05D002689 6.6e-08 61.2 62 48.4
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 6.6e-08 61.2 97 42.3
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 6.6e-08 61.2 97 42.3
Phvul.005G184200 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 6.6e-08 61.2 97 39.2
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 8.6e-08 60.8 90 40.0
Prupe.3G106900 Prunus persica HOM05D002570 ORTHO05D002689 1.1e-07 60.5 62 51.6
ClCG09G003530 Citrullus lanatus HOM05D002570 ORTHO05D002689 1.5e-07 60.1 69 49.3
Potri.001G037400 Populus trichocarpa HOM05D002570 ORTHO05D002689 1.5e-07 60.1 100 41.0
RcHm_v2.0_Chr2g0131671 Rosa chinensis HOM05D002570 ORTHO05D002689 1.5e-07 60.1 90 42.2
FvH4_6g28000 Fragaria vesca HOM05D002570 ORTHO05D002689 2.5e-07 59.3 93 40.9
FAN02G4288 Fragaria x ananassa HOM05D002570 ORTHO05D002689 2.5e-07 59.3 93 40.9
FAN14G4539 Fragaria x ananassa HOM05D002570 ORTHO05D002689 2.5e-07 59.3 93 40.9
Glyma.13G371800 Glycine max HOM05D002570 ORTHO05D002689 2.5e-07 59.3 90 38.9
MELO3C023490.2 Cucumis melo HOM05D002570 ORTHO05D002689 4.3e-07 58.5 100 41.0
FAN05G0139 Fragaria x ananassa HOM05D002570 ORTHO05D002689 4.3e-07 58.5 93 40.9
FAN05G5383 Fragaria x ananassa HOM05D002570 ORTHO05D002689 4.3e-07 58.5 93 40.9
Potri.003G187500 Populus trichocarpa HOM05D002570 ORTHO05D002689 4.3e-07 58.5 96 38.5
Sabra03G0137200 Salix brachista HOM05D002570 ORTHO05D002689 4.3e-07 58.5 99 38.4
Ciclev10026849m.g Citrus clementina HOM05D002570 ORTHO05D002689 5.6e-07 58.2 90 40.0
Actinidia25496 Actinidia chinensis HOM05D002570 ORTHO05D002689 7.3e-07 57.8 110 35.5
ClCG10G012800 Citrullus lanatus HOM05D002570 ORTHO05D002689 7.3e-07 57.8 89 39.3
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 7.3e-07 57.8 104 35.6
Manes.04G097900 Manihot esculenta HOM05D002570 ORTHO05D002689 7.3e-07 57.8 72 45.8
unitig_22.g6281 Utricularia gibba HOM05D002570 ORTHO05D002689 7.3e-07 57.8 67 41.8
CsaV3_7G031670 Cucumis sativus L. HOM05D002570 ORTHO05D002689 9.5e-07 57.4 100 40.0
Migut.I00642 Erythranthe guttata HOM05D002570 ORTHO05D002689 9.5e-07 57.4 102 35.3
FAN09G2432 Fragaria x ananassa HOM05D002570 ORTHO05D002689 9.5e-07 57.4 93 39.8
MBI16_g27293_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 1.2e-06 57.0 98 37.8
MD17G1229300 Malus domestica HOM05D002570 ORTHO05D002689 1.2e-06 57.0 103 38.8
MD09G1230400 Malus domestica HOM05D002570 ORTHO05D002689 1.6e-06 56.6 52 53.8
GSVIVG01016063001 Vitis vinifera HOM05D002570 ORTHO05D002689 1.6e-06 56.6 103 36.9
CANSAT64G2315 Cannabis sativa HOM05D002570 ORTHO05D002689 2.1e-06 56.2 103 37.9
Glyma.15G001900 Glycine max HOM05D002570 ORTHO05D002689 2.1e-06 56.2 90 40.0
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 2.1e-06 56.2 102 35.3
Os04g0603400 Oryza sativa ssp. japonica HOM05D002570 ORTHO05D002689 2.1e-06 56.2 70 45.7
Eucgr.J03139 Eucalyptus grandis HOM05D002570 ORTHO05D002689 2.8e-06 55.8 102 39.2
Oeu036442.1 Olea europaea HOM05D002570 ORTHO05D002689 4.7e-06 55.1 52 48.1
Sed0010699 Sechium edule HOM05D002570 ORTHO05D002689 4.7e-06 55.1 100 38.0
Actinidia18273 Actinidia chinensis HOM05D002570 ORTHO05D002689 6.2e-06 54.7 100 36.0
Sed0009460 Sechium edule HOM05D002570 ORTHO05D002689 6.2e-06 54.7 100 39.0
Zm00001eb071700 Zea mays HOM05D002570 ORTHO05D002689 6.2e-06 54.7 97 38.1
ECA247G0437 Erigeron canadensis HOM05D005398 ORTHO05D000476 8.1e-06 54.3 69 42.0
Lj3g0010275 Lotus japonicus HOM05D002570 ORTHO05D002689 8.1e-06 54.3 90 36.7


User provided reference genes

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