Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.3e-118 429.9 236 100.0
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.7e-97 358.6 238 86.1
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 5.1e-91 338.2 255 78.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 4.5e-79 298.5 224 78.6
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 4.6e-76 288.5 237 73.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 6.1e-76 288.1 236 72.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.1e-74 283.9 239 72.4
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 9.7e-74 280.8 239 72.8
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 6.3e-73 278.1 246 69.1
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.6e-71 272.7 242 68.2
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 3.4e-71 272.3 236 67.4
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.5e-71 271.9 238 69.7
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 6.5e-70 268.1 239 68.6
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.1e-69 267.3 240 67.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.9e-69 266.5 239 68.2
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.9e-69 266.5 244 67.2
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 3.2e-69 265.8 240 68.8
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 5.5e-69 265.0 246 66.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 7.2e-69 264.6 223 69.1
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 9.4e-69 264.2 243 66.3
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.7e-68 262.7 243 66.3
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.8e-67 260.0 246 66.3
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.8e-67 260.0 246 65.4
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.8e-67 260.0 239 64.9
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.3e-67 259.6 242 65.7
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 3.9e-67 258.8 240 68.3
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 6.7e-67 258.1 242 65.3
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 8.8e-67 257.7 238 66.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.5e-66 256.9 237 65.0
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.5e-66 256.9 240 65.4
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.5e-66 256.9 236 66.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.0e-66 256.5 239 65.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 2.0e-66 256.5 238 66.0
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 3.3e-66 255.8 243 64.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 5.7e-66 255.0 236 66.1
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 2.8e-65 252.7 236 64.4
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 3.7e-65 252.3 237 64.1
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.7e-65 252.3 236 65.7
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 4.8e-65 251.9 237 64.1
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 8.2e-65 251.1 244 64.3
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.8e-64 250.0 246 63.4
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 3.1e-64 249.2 237 65.0
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.1e-64 248.8 237 64.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 9.1e-64 247.7 237 65.0
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.2e-63 247.3 237 65.4
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.5e-63 246.9 243 63.0
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.0e-63 246.5 236 62.7
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 7.7e-63 244.6 236 62.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.3e-62 243.8 236 66.5
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.8e-62 242.3 241 64.7
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.1e-61 240.7 239 64.4
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.5e-61 239.6 239 63.2
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 8.0e-60 234.6 239 62.3
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.0e-59 234.2 209 64.6
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.0e-59 234.2 236 64.0
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.8e-59 233.4 238 62.6
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.0e-58 229.9 243 60.1
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.6e-58 229.6 236 58.5
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 7.5e-58 228.0 238 61.3
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.8e-57 226.1 235 58.3
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.7e-57 225.7 239 59.8
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.7e-57 225.7 236 61.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.8e-57 225.3 190 66.8
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-56 224.2 220 63.6
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.4e-56 223.0 220 63.6
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.4e-56 223.0 226 63.3
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.1e-56 221.1 226 62.8
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 9.1e-56 221.1 236 60.2
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 2.6e-55 219.5 236 59.3
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.6e-55 219.5 149 81.2
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 4.5e-55 218.8 236 59.7
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.9e-55 218.4 236 57.6
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.0e-54 217.6 174 69.0
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.0e-54 217.6 173 70.5
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.3e-54 217.2 199 64.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.7e-54 216.9 174 68.4
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.7e-54 216.9 174 73.0
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 2.2e-54 216.5 174 68.4
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 2.2e-54 216.5 174 68.4
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 2.2e-54 216.5 170 71.2
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 2.2e-54 216.5 233 58.4
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 3.8e-54 215.7 179 69.8
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.8e-54 215.7 238 60.1
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 5.0e-54 215.3 179 69.8
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 5.0e-54 215.3 181 66.3
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 8.5e-54 214.5 180 69.4
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.1e-53 214.2 240 58.3
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 2.5e-53 213.0 239 57.3
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.2e-53 212.6 257 54.5
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.6e-52 210.3 246 55.7
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 3.6e-52 209.1 134 82.8
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 4.7e-52 208.8 242 53.7
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 4.7e-52 208.8 241 58.1
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.0e-51 207.6 250 54.0
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.0e-51 206.1 239 56.5
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.2e-50 204.1 226 56.2
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 4.4e-50 202.2 147 76.2
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 2.8e-49 199.5 208 63.9
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.8e-49 199.5 212 59.0
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.8e-49 198.7 212 58.0
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 8.3e-49 198.0 265 50.6
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 4.1e-48 195.7 184 64.7
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 5.4e-48 195.3 175 66.3
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 9.1e-48 194.5 175 62.3
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 6.5e-46 188.3 227 54.6
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 6.5e-46 188.3 168 61.3
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 8.5e-46 188.0 225 52.0
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 3.6e-44 182.6 180 65.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 8.3e-41 171.4 202 60.9
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.1e-40 171.0 174 59.8
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 3.6e-36 156.0 140 65.7
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.7e-36 155.6 201 53.2
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 4.4e-34 149.1 128 64.8
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 6.4e-33 145.2 179 53.1
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.4e-32 143.3 128 61.7
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.0e-30 136.3 144 52.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 7.3e-29 131.7 176 44.3
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.9e-24 117.1 231 38.1
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.4e-24 116.7 145 49.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.3e-22 110.9 104 56.7
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 3.3e-21 106.3 75 73.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.9e-17 92.4 106 48.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.4e-16 90.9 105 50.5
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.6e-12 77.4 117 50.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.2e-09 67.0 66 60.6


User provided reference genes

Program Settings