Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 7.5e-312 1073.2 548 100.0
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.3e-278 962.6 549 91.1
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.1e-256 888.3 549 85.4
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.1e-226 790.0 553 75.9
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.2e-215 753.4 552 74.1
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.6e-215 752.3 555 73.7
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 2.9e-214 748.8 551 73.9
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 6.1e-212 741.1 576 69.4
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.3e-211 739.2 561 71.1
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 1.4e-208 729.9 550 72.5
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.5e-207 725.3 543 72.2
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.0e-206 723.8 567 70.5
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 6.7e-203 711.1 554 72.0
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.4e-200 703.4 558 69.9
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 5.3e-200 701.4 512 73.6
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 1.3e-198 696.8 544 70.8
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.3e-198 696.8 534 69.1
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.5e-194 683.3 497 73.4
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 7.5e-194 681.0 504 72.6
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.8e-193 678.3 497 73.0
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 6.3e-193 677.9 560 66.4
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 7.0e-192 674.5 564 66.5
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.0e-192 674.5 564 65.8
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 9.1e-192 674.1 566 66.3
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 7.7e-191 671.0 558 66.1
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 5.5e-189 664.8 566 66.1
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.2e-188 663.7 576 64.6
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 4.0e-187 658.7 550 65.8
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 5.9e-183 644.8 564 64.2
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 1.7e-182 643.3 526 67.1
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 8.6e-182 641.0 564 63.5
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.5e-181 640.2 526 67.1
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.6e-180 636.7 565 63.2
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 4.4e-178 628.6 526 65.4
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.8e-177 625.9 529 65.6
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 4.1e-176 622.1 532 65.0
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 2.0e-175 619.8 526 64.8
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.6e-172 610.1 551 62.4
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.4e-171 607.1 532 63.3
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 5.8e-170 601.7 532 64.5
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.7e-169 600.1 559 60.3
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.9e-169 599.4 524 64.1
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 6.4e-169 598.2 552 62.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 1.1e-168 597.4 532 63.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.4e-168 597.0 529 64.5
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.1e-168 595.5 518 64.7
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 5.4e-168 595.1 554 62.1
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 2.7e-167 592.8 580 59.1
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 1.0e-166 590.9 537 61.8
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.1e-165 587.4 551 61.0
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.3e-165 585.9 565 60.7
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 7.3e-165 584.7 526 62.4
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 3.6e-164 582.4 519 64.0
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.0e-163 578.9 523 62.5
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 8.3e-161 571.2 536 62.1
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 3.2e-160 569.3 639 55.2
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 5.4e-160 568.5 595 57.1
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 5.4e-160 568.5 595 57.1
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 6.0e-159 565.1 548 59.5
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 1.7e-158 563.5 552 59.2
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 7.3e-157 558.1 534 59.6
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.2e-156 557.4 531 60.1
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 4.1e-152 542.3 508 60.6
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.6e-151 540.4 531 59.5
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.1e-149 534.3 497 58.8
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 7.3e-149 531.6 501 60.5
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 5.2e-147 525.4 544 57.9
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 9.9e-146 521.2 500 59.2
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.6e-143 513.8 534 56.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.7e-143 513.1 493 59.2
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 9.6e-141 504.6 564 53.2
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.6e-140 503.8 541 55.5
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 4.4e-138 495.7 511 55.8
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 3.5e-135 486.1 565 52.4
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 4.6e-135 485.7 547 55.0
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.0e-135 485.3 441 60.3
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.1e-133 481.1 530 53.8
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 2.8e-132 476.5 499 56.3
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.3e-129 467.6 470 56.4
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 6.0e-127 458.8 517 53.6
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 7.9e-127 458.4 425 62.4
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 5.6e-125 452.2 504 53.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 3.1e-123 446.4 414 63.0
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 3.8e-121 439.5 502 51.2
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 7.9e-119 431.8 465 56.6
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 7.4e-117 425.2 494 53.0
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 8.2e-116 421.8 503 50.1
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.2e-113 413.7 510 52.7
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.9e-112 410.6 352 65.3
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 5.9e-106 389.0 519 49.7
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.3e-102 377.1 510 47.5
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.7e-100 370.9 525 47.0
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 4.5e-98 362.8 530 47.5
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.1e-96 358.2 535 46.0
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 3.7e-92 343.2 554 41.3
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.4e-91 340.5 517 43.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.1e-91 339.7 338 58.9
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.8e-89 333.2 545 40.9
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.2e-88 330.1 307 59.6
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.6e-87 327.8 559 39.5
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 5.5e-80 302.8 550 40.0
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 5.2e-78 296.2 539 39.3
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.7e-76 291.2 295 57.3
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 5.9e-74 282.7 389 43.7
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.5e-72 278.1 229 64.2
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.3e-65 254.2 222 64.0
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 4.4e-61 240.0 357 46.5
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 2.4e-59 234.2 517 33.5
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 2.6e-45 187.6 581 31.0
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.0e-41 175.6 514 30.2
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 3.0e-41 174.1 385 35.6
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 1.5e-37 161.8 141 63.1
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.1e-32 145.6 88 81.8
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 1.5e-29 135.2 128 58.6
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 9.9e-13 79.3 115 45.2
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 6.0e-10 70.1 98 39.8
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.5e-08 65.5 53 58.5
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 7.4e-08 63.2 66 51.5


User provided reference genes

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