Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.5e-104 382.9 197 100.0
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 2.9e-87 325.5 197 87.8
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 2.0e-80 302.8 197 80.2
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.0e-80 302.8 196 79.1
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.9e-79 298.1 196 80.1
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.9e-79 298.1 196 80.1
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.4e-78 296.6 196 80.1
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 1.6e-77 293.1 197 77.7
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.1e-76 288.1 196 76.5
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.5e-75 285.8 196 76.0
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.5e-75 285.8 196 76.0
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 3.3e-75 285.4 197 75.6
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 1.2e-74 283.5 196 76.5
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 2.1e-74 282.7 197 74.6
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 3.6e-74 282.0 197 77.2
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 1.4e-73 280.0 197 76.6
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 3.1e-73 278.9 198 77.8
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 6.8e-73 277.7 197 74.1
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 3.4e-72 275.4 198 74.7
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 2.2e-71 272.7 195 75.9
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 4.9e-71 271.6 196 76.0
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.4e-70 269.2 198 73.7
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.4e-70 269.2 197 74.6
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 2.4e-70 269.2 197 71.1
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 3.2e-70 268.9 196 74.5
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 3.2e-70 268.9 197 73.6
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 7.1e-70 267.7 197 71.1
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 6.0e-69 264.6 197 71.6
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.0e-68 263.8 199 74.4
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.3e-68 262.7 195 73.3
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 6.6e-68 261.2 181 76.8
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 6.6e-68 261.2 196 71.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.5e-67 260.0 197 73.1
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 1.9e-67 259.6 198 71.7
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.5e-67 259.2 197 73.1
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 3.3e-67 258.8 197 71.1
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.1e-66 256.1 198 71.2
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.8e-66 255.8 197 71.6
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 8.1e-66 254.2 201 69.7
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-65 253.8 198 72.7
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.8e-65 253.1 198 72.7
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 3.1e-65 252.3 195 69.7
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 5.3e-65 251.5 164 78.7
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 9.0e-65 250.8 174 75.9
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 9.0e-65 250.8 197 71.1
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 9.0e-65 250.8 196 69.9
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.2e-64 250.4 174 75.3
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 1.5e-64 250.0 197 71.1
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.6e-64 249.2 196 69.4
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 3.4e-64 248.8 173 76.3
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 4.4e-64 248.4 197 70.6
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 4.4e-64 248.4 193 71.5
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 9.9e-64 247.3 196 68.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.3e-63 246.9 197 68.5
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.2e-63 246.1 180 74.4
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 2.9e-63 245.7 196 68.9
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 3.8e-63 245.4 196 65.3
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 3.8e-63 245.4 197 68.0
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 4.9e-63 245.0 140 90.0
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 4.9e-63 245.0 160 80.0
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.4e-62 243.4 194 70.6
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 2.4e-62 242.7 198 67.7
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.2e-62 242.3 196 67.3
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 7.1e-62 241.1 194 69.6
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 2.1e-61 239.6 196 67.9
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 6.0e-61 238.0 202 66.3
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.0e-60 237.3 195 66.2
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.3e-60 236.9 199 67.8
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.7e-60 236.5 167 74.9
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.7e-60 236.5 192 65.6
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.3e-60 236.1 193 68.4
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 2.3e-60 236.1 176 72.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.3e-60 236.1 200 67.0
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.3e-60 236.1 200 66.0
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 3.9e-60 235.3 167 74.3
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 3.9e-60 235.3 201 67.2
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 5.1e-60 235.0 193 67.9
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 6.6e-60 234.6 164 75.6
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 6.6e-60 234.6 153 81.7
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.1e-59 233.8 193 67.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 1.1e-59 233.8 174 73.6
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 1.1e-59 233.8 191 67.5
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.5e-59 233.4 174 71.8
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.5e-59 232.6 197 67.0
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 7.3e-59 231.1 174 70.1
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.6e-58 229.9 197 65.0
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.1e-58 229.6 160 77.5
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.1e-58 229.6 197 65.0
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 2.8e-58 229.2 160 76.2
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 4.8e-58 228.4 200 67.5
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.8e-58 228.4 159 77.4
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 4.8e-58 228.4 197 65.0
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.1e-57 227.3 202 63.4
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.1e-57 227.3 197 64.0
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.4e-57 226.9 198 66.2
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.8e-57 226.5 198 65.7
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 2.4e-57 226.1 160 74.4
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 3.1e-57 225.7 177 69.5
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 4.0e-57 225.3 180 68.9
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.2e-56 223.8 198 64.6
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-56 223.8 197 65.0
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 2.0e-56 223.0 196 66.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.6e-56 222.6 170 72.9
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.5e-56 221.9 200 66.0
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 4.5e-56 221.9 176 69.9
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 5.8e-56 221.5 201 65.7
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.3e-55 220.3 199 65.3
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.3e-55 220.3 151 76.8
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 1.3e-55 220.3 198 64.6
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.3e-55 220.3 162 75.3
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.3e-55 220.3 200 64.5
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.9e-55 219.2 163 73.0
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 4.9e-55 218.4 154 74.7
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 4.9e-55 218.4 154 74.7
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.9e-55 218.4 199 63.8
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 6.4e-55 218.0 154 74.7
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 6.4e-55 218.0 154 74.7
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 6.4e-55 218.0 175 67.4
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 1.1e-54 217.2 153 74.5
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.4e-54 216.1 196 64.8
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 4.2e-54 215.3 175 70.3
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 4.2e-54 215.3 175 67.4
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.4e-54 214.9 150 79.3
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 9.3e-54 214.2 207 63.3
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.6e-53 213.4 194 62.9
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 8.7e-52 207.6 180 65.6
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.3e-51 205.3 205 58.5
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 9.6e-51 204.1 198 61.1
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.3e-50 203.8 115 90.4
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-50 203.8 197 62.4
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.1e-49 200.7 113 91.2
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 2.4e-49 199.5 176 67.0
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 5.3e-49 198.4 115 88.7
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 5.3e-49 198.4 115 88.7
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.0e-48 196.4 112 90.2
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 4.5e-48 195.3 113 87.6
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.9e-47 192.6 220 54.5
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.5e-46 189.5 196 57.7
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.5e-46 189.5 196 57.7
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 5.5e-46 188.3 193 58.0
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 1.2e-45 187.2 156 68.6
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.6e-45 186.8 140 69.3
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 2.7e-45 186.0 112 86.6
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 3.5e-45 185.7 193 58.0
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.3e-44 183.0 142 69.0
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.9e-44 182.2 128 74.2
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 6.7e-44 181.4 348 38.2
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.9e-43 179.9 160 65.0
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.3e-43 178.7 140 68.6
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 4.3e-43 178.7 172 61.0
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.3e-42 177.2 108 80.6
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.5e-40 170.2 168 61.3
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 7.6e-40 167.9 142 60.6
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.9e-38 163.3 113 73.5
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 2.5e-38 162.9 111 73.0
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 2.7e-37 159.5 120 68.3
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 9.4e-30 134.4 109 62.4
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 7.9e-29 131.3 104 69.2
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 7.7e-24 114.8 139 47.5
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.3e-23 114.0 94 67.0
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 6.5e-23 111.7 91 68.1
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.9e-22 110.2 94 64.9
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.2e-21 107.5 86 70.9
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 7.9e-21 104.8 86 69.8
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 7.9e-21 104.8 86 69.8
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.2e-16 90.9 83 57.8
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.9e-14 83.6 63 68.3
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 9.4e-14 81.3 49 83.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 3.6e-13 79.3 44 90.9
Lalb_Chr12g0198741 Lupinus albus HOM05D004106 ORTHO05D004381 7.4e-11 71.6 82 48.8
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 6.3e-10 68.6 38 86.8
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 2.9e-07 59.7 95 44.2
AagrBONN_evm.TU.Sc2ySwM_362.2265 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.1e-06 57.8 97 42.3
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 90 42.2
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 90 42.2
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 90 42.2
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 90 42.2
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 90 42.2
AagrBONN_evm.TU.Sc2ySwM_228.5940 Anthoceros agrestis HOM05D010958 ORTHO05D004381 4.2e-06 55.8 81 44.4


User provided reference genes

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