Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 2.0e-228 795.4 400 100.0
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 9.3e-210 733.4 400 91.2
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 4.8e-166 588.2 400 76.2
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.1e-154 550.4 380 72.4
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.8e-152 543.1 386 70.5
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.1e-151 540.4 396 71.5
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 9.7e-151 537.3 388 70.4
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.3e-150 537.0 382 71.5
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 4.1e-149 531.9 385 69.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.3e-147 526.9 400 67.2
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 8.5e-147 524.2 385 69.1
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 9.4e-146 520.8 398 65.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.0e-144 515.4 389 68.6
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 5.2e-144 515.0 401 66.8
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.7e-142 510.0 396 65.9
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 6.3e-142 508.1 401 66.1
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 6.3e-142 508.1 390 67.7
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 8.3e-142 507.7 391 66.0
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.4e-141 506.9 402 64.9
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 5.4e-141 505.0 390 66.9
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 9.1e-141 504.2 396 66.7
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.6e-140 503.4 364 70.1
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.6e-140 503.4 395 65.3
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.0e-140 503.1 398 64.8
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.9e-140 501.5 396 64.6
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.3e-139 500.4 401 65.1
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.2e-139 499.6 384 66.9
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.0e-139 498.4 387 66.9
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 8.5e-139 497.7 396 63.6
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.9e-138 496.5 368 66.0
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 3.2e-138 495.7 386 66.6
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.2e-137 493.8 394 65.0
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 6.1e-137 491.5 398 64.6
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 8.0e-137 491.1 398 62.8
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.4e-136 490.3 378 67.2
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.8e-136 490.0 383 66.6
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 5.2e-136 488.4 392 66.8
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 5.2e-136 488.4 372 67.7
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 6.8e-136 488.0 376 68.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.6e-135 486.1 394 65.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.7e-134 483.4 400 62.0
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 3.1e-133 479.2 325 75.4
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 4.1e-133 478.8 399 61.4
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.5e-130 469.5 394 62.9
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.5e-127 460.3 398 60.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.5e-127 460.3 400 61.0
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 3.4e-127 459.1 376 63.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 7.5e-127 458.0 352 64.5
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 9.8e-127 457.6 363 64.5
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.9e-126 455.3 368 65.2
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.1e-125 454.1 377 64.5
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.4e-125 453.8 401 60.1
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.4e-125 453.8 447 57.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.2e-125 452.6 400 60.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.4e-125 451.8 365 64.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 5.4e-125 451.8 367 64.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.2e-124 450.7 375 62.4
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 4.6e-124 448.7 367 64.0
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.7e-123 446.8 367 64.0
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.9e-122 443.4 284 76.1
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.2e-121 440.7 367 60.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.6e-121 440.3 384 63.0
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 4.7e-121 438.7 359 62.7
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.4e-120 437.2 368 62.5
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.4e-120 437.2 377 62.9
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 5.2e-120 435.3 390 57.9
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.0e-119 433.3 400 57.0
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.7e-118 430.3 376 60.6
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 4.9e-118 428.7 363 61.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.4e-117 426.4 396 59.3
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 2.7e-116 422.9 363 60.9
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 4.6e-116 422.2 363 60.1
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 7.8e-116 421.4 366 60.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.7e-115 420.2 363 60.6
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 3.9e-115 419.1 372 60.2
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 8.6e-115 417.9 363 61.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.9e-114 416.8 348 63.2
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 3.3e-114 416.0 363 60.3
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.2e-113 414.1 372 59.9
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 3.6e-113 412.5 362 60.5
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 4.7e-113 412.1 362 60.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 4.7e-113 412.1 382 58.4
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.8e-112 410.2 362 60.2
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 2.3e-112 409.8 331 63.7
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 8.9e-112 407.9 296 69.3
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.7e-110 402.5 357 58.0
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.1e-109 401.0 357 58.3
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.4e-109 399.8 397 56.7
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.5e-108 396.0 275 73.8
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 5.1e-107 392.1 272 72.1
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.1e-106 391.0 270 70.0
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 3.5e-100 369.4 404 50.2
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.0e-99 367.9 283 65.0
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.5e-98 364.0 248 73.8
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.1e-97 360.1 242 75.6
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.5e-95 354.0 274 63.1
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.2e-94 350.1 336 54.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.9e-94 349.7 313 59.4
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.7e-91 340.5 253 70.0
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.4e-88 330.9 374 49.5
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 7.6e-87 325.1 334 51.5
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.9e-86 322.4 179 83.8
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 7.9e-84 315.1 297 57.9
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 5.1e-83 312.4 331 51.4
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.3e-81 307.8 171 84.2
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.1e-81 307.0 306 52.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 5.7e-58 229.2 198 63.1
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.2e-55 221.5 347 39.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 5.7e-50 202.6 173 58.4
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 7.9e-44 182.2 343 37.0
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 8.2e-41 172.2 265 40.8
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.2e-39 168.3 142 60.6
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 7.7e-39 165.6 214 41.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.3e-35 154.1 182 47.3
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 7.5e-26 122.5 71 83.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 2.2e-25 120.9 118 57.6
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 6.6e-14 82.8 108 43.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.3e-11 74.3 55 65.5


User provided reference genes

Program Settings