Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G096600 Populus trichocarpa HOM05D001111 ORTHO05D037397 6.7e-125 450.7 224 100.0
Sabra18G0083800 Salix brachista HOM05D001111 ORTHO05D037397 1.1e-87 327.0 207 83.1
Potri.018G096400 Populus trichocarpa HOM05D001111 ORTHO05D037397 1.2e-65 253.8 129 94.6
Sabra10G0026000 Salix brachista HOM05D001111 ORTHO05D000939 3.5e-33 146.0 145 54.5
Potri.010G041300 Populus trichocarpa HOM05D001111 ORTHO05D000939 1.0e-27 127.9 187 41.7
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 6.0e-25 118.6 241 37.3
TWI36G1740 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 8.5e-19 98.2 154 41.6
CiPaw.06G071600 Carya illinoinensis HOM05D001111 ORTHO05D000939 2.1e-17 93.6 166 41.0
Manes.13G029800 Manihot esculenta HOM05D001111 ORTHO05D000939 1.8e-16 90.5 240 33.3
Gorai.005G182000 Gossypium raimondii HOM05D001111 ORTHO05D000939 3.0e-16 89.7 137 42.3
Gohir.A03G139100 Gossypium hirsutum HOM05D001111 ORTHO05D000939 5.1e-16 89.0 131 42.7
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 8.7e-16 88.2 224 32.1
Duzib251G0551 Durio zibethinus HOM05D001111 ORTHO05D000939 8.7e-16 88.2 205 33.7
Sed0011194 Sechium edule HOM05D001111 ORTHO05D000939 8.7e-16 88.2 160 42.5
Sp5g25500 Schrenkiella parvula HOM05D001111 ORTHO05D000939 1.1e-15 87.8 208 30.3
Gohir.D04G178500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.9e-15 87.0 171 36.3
Atru.chr11.2037 Acer truncatum HOM05D001111 ORTHO05D000939 2.5e-15 86.7 200 34.0
Gohir.D02G162000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 2.5e-15 86.7 132 41.7
Gorai.012G171600 Gossypium raimondii HOM05D001111 ORTHO05D000939 2.5e-15 86.7 172 36.0
Duzib268G1217 Durio zibethinus HOM05D001111 ORTHO05D000939 4.3e-15 85.9 159 37.7
Sp1g21110 Schrenkiella parvula HOM05D001111 ORTHO05D000939 1.3e-14 84.3 220 30.5
TWI18G0496 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 2.2e-14 83.6 154 39.0
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 6.3e-14 82.0 142 38.0
Gohir.A04G135400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.1e-13 81.3 171 35.1
Thecc.02G251000 Theobroma cacao HOM05D001111 ORTHO05D000939 1.4e-13 80.9 222 31.1
Carub.0001s2323 Capsella rubella HOM05D001111 ORTHO05D000939 1.8e-13 80.5 133 36.1
Ciclev10032350m.g Citrus clementina HOM05D001111 ORTHO05D000939 1.8e-13 80.5 177 34.5
Thhalv10018979m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 3.1e-13 79.7 205 30.7
AL1G37460 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 5.3e-13 79.0 139 36.0
Aa31LG7G7610 Aethionema arabicum HOM05D001111 ORTHO05D000939 6.9e-13 78.6 142 35.2
BcaNung06891 Brassica carinata HOM05D001111 ORTHO05D000939 6.9e-13 78.6 214 31.3
C05p22910 Brassica napus HOM05D001111 ORTHO05D000939 6.9e-13 78.6 214 31.3
BolC5t30991H Brassica oleracea HOM05D001111 ORTHO05D000939 6.9e-13 78.6 214 31.3
Cfa009151 Carpinus fangiana HOM05D001111 ORTHO05D000939 1.2e-12 77.8 230 31.3
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.2e-12 77.8 147 38.8
AT1G23710 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 1.5e-12 77.4 139 36.0
SGA_v2.0_scaffold165G38234 Striga asiatica HOM05D001111 ORTHO05D000939 1.5e-12 77.4 145 37.9
BolC6t39498H Brassica oleracea HOM05D001111 ORTHO05D000939 2.0e-12 77.0 158 35.4
PGR119G0161 Punica granatum HOM05D001111 ORTHO05D000939 2.0e-12 77.0 226 32.3
PGSC0003DMG400003250 Solanum tuberosum HOM05D001111 ORTHO05D000939 2.0e-12 77.0 128 40.6
CARHR063590 Cardamine hirsuta HOM05D001111 ORTHO05D000939 2.6e-12 76.6 127 38.6
Cpa.g.sc69.47 Carica papaya HOM05D001111 ORTHO05D000939 3.4e-12 76.3 145 37.9
A02p16510 Brassica napus HOM05D001111 ORTHO05D000939 4.5e-12 75.9 206 27.7
BraA02t06709Z Brassica rapa HOM05D001111 ORTHO05D000939 4.5e-12 75.9 206 27.7
A09p41100 Brassica napus HOM05D001111 ORTHO05D000939 5.9e-12 75.5 204 30.4
C06p44280 Brassica napus HOM05D001111 ORTHO05D000939 5.9e-12 75.5 141 35.5
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 5.9e-12 75.5 148 36.5
BcaC08g46484 Brassica carinata HOM05D001111 ORTHO05D000939 1.3e-11 74.3 143 35.0
BraA07t31246Z Brassica rapa HOM05D001111 ORTHO05D000939 1.3e-11 74.3 139 38.1
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 1.3e-11 74.3 129 41.1
Lalb_Chr16g0387341 Lupinus albus HOM05D001111 ORTHO05D000939 1.3e-11 74.3 152 33.6
BcaC03g15182 Brassica carinata HOM05D001111 ORTHO05D000939 1.7e-11 73.9 204 27.9
CARHR024110 Cardamine hirsuta HOM05D001111 ORTHO05D000939 2.2e-11 73.6 144 32.6
MSTRG.13369 Avicennia marina HOM05D001111 ORTHO05D000939 2.9e-11 73.2 165 34.5
A07p36790 Brassica napus HOM05D001111 ORTHO05D000939 2.9e-11 73.2 139 37.4
Nitab4.5_0000884g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.9e-11 73.2 149 33.6
Oeu003459.1 Olea europaea HOM05D001111 ORTHO05D000939 2.9e-11 73.2 142 33.8
BcaB03g14801 Brassica carinata HOM05D001111 ORTHO05D000939 3.8e-11 72.8 191 30.4
BraA09t39602Z Brassica rapa HOM05D001111 ORTHO05D000939 3.8e-11 72.8 204 29.9
ClCG08G018030 Citrullus lanatus HOM05D001111 ORTHO05D000939 3.8e-11 72.8 144 37.5
MSTRG.2399 Avicennia marina HOM05D001111 ORTHO05D000939 5.0e-11 72.4 211 27.5
Thhalv10008273m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 5.0e-11 72.4 193 29.5
Lj6P806T43 Lonicera japonica HOM05D001111 ORTHO05D000939 5.0e-11 72.4 153 34.0
BcaB07g32354 Brassica carinata HOM05D001111 ORTHO05D000939 6.5e-11 72.0 237 30.0
Oeu054059.1 Olea europaea HOM05D001111 ORTHO05D000939 6.5e-11 72.0 157 32.5
AT1G70420 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 8.5e-11 71.6 203 28.6
CsaV3_3G025060 Cucumis sativus L. HOM05D001111 ORTHO05D000939 8.5e-11 71.6 171 36.3
Carub.0002s1711 Capsella rubella HOM05D001111 ORTHO05D000939 1.1e-10 71.2 187 31.0
MSTRG.7903 Avicennia marina HOM05D001111 ORTHO05D000939 1.4e-10 70.9 135 33.3
Nitab4.5_0000203g0250 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.4e-10 70.9 167 33.5
BolC2t08816H Brassica oleracea HOM05D001111 ORTHO05D000939 1.9e-10 70.5 206 28.6
Sopen05g001270 Solanum pennellii HOM05D001111 ORTHO05D000939 1.9e-10 70.5 231 26.8
Peaxi162Scf00710g00051 Petunia axillaris HOM05D001111 ORTHO05D000939 2.5e-10 70.1 147 34.7
Solyc05g005260.3 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.5e-10 70.1 231 26.4
C02p27600 Brassica napus HOM05D001111 ORTHO05D000939 3.2e-10 69.7 206 29.6
MELO3C012966.2 Cucumis melo HOM05D001111 ORTHO05D000939 3.2e-10 69.7 133 40.6
Cc11_g15210 Coffea canephora HOM05D001111 ORTHO05D000939 5.5e-10 68.9 209 28.7
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 5.5e-10 68.9 147 36.7
Solyc04g024780.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 5.5e-10 68.9 181 33.1
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 7.2e-10 68.6 169 34.3
Nitab4.5_0001483g0080 Nicotiana tabacum HOM05D001111 ORTHO05D000939 7.2e-10 68.6 164 32.9
Psat2g104240 Pisum sativum HOM05D001111 ORTHO05D000939 7.2e-10 68.6 181 29.3
Sopen04g010680 Solanum pennellii HOM05D001111 ORTHO05D000939 7.2e-10 68.6 189 32.3
SGA_v2.0_scaffold63G21699 Striga asiatica HOM05D001111 ORTHO05D000939 7.2e-10 68.6 140 32.1
CAN.G300.10 Capsicum annuum HOM05D001111 ORTHO05D000939 1.6e-09 67.4 177 31.1
Nitab4.5_0000031g0470 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.6e-09 67.4 170 32.4
Migut.E00167 Erythranthe guttata HOM05D001111 ORTHO05D000939 2.1e-09 67.0 157 31.8
AL2G29790 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 2.7e-09 66.6 162 35.2
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 2.7e-09 66.6 177 32.8
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 2.7e-09 66.6 194 30.9
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.7e-09 66.6 194 30.9
SalBow2G2010 Salvia bowleyana HOM05D001111 ORTHO05D000939 3.6e-09 66.2 117 33.3
BcaB05g24567 Brassica carinata HOM05D001111 ORTHO05D000939 4.6e-09 65.9 181 27.1
THA.LOC104822146 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 7.9e-09 65.1 138 31.9
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.0e-08 64.7 139 37.4
Glyma.01G030300 Glycine max HOM05D001111 ORTHO05D000939 1.0e-08 64.7 124 37.1
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 1.4e-08 64.3 225 30.2
Ca_03154_v3 Cicer arietinum L. HOM05D001111 ORTHO05D000939 1.4e-08 64.3 204 29.4
PGSC0003DMG400013482 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.4e-08 64.3 188 28.7
Hma1.2p1_0536F.1_g174000 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 3.0e-08 63.2 133 35.3
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 3.9e-08 62.8 177 30.5
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 3.9e-08 62.8 219 30.1
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 5.1e-08 62.4 159 33.3
DCAR_024458 Daucus carota HOM05D001111 ORTHO05D000939 6.7e-08 62.0 133 32.3
Glyma.02G035200 Glycine max HOM05D001111 ORTHO05D000939 6.7e-08 62.0 127 37.0
Rhsim12G0118800 Rhododendron simsii HOM05D001111 ORTHO05D000939 8.8e-08 61.6 148 33.8
unitig_22.g6937 Utricularia gibba HOM05D001111 ORTHO05D000939 8.8e-08 61.6 218 29.8
CDE07G0471 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 1.1e-07 61.2 157 30.6
Dinv15287 Davidia involucrata HOM05D001111 ORTHO05D000939 1.1e-07 61.2 150 33.3
SGA_v2.0_scaffold8G04207 Striga asiatica HOM05D001111 ORTHO05D000939 1.5e-07 60.8 189 27.5
CDE06G0264 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 2.0e-07 60.5 192 28.6
RcHm_v2.0_Chr4g0443781 Rosa chinensis HOM05D001111 ORTHO05D000939 3.3e-07 59.7 186 30.6
Phvul.002G071000 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 4.4e-07 59.3 138 33.3
Migut.L01424 Erythranthe guttata HOM05D001111 ORTHO05D000939 5.7e-07 58.9 159 28.9
Eucgr.B03318 Eucalyptus grandis HOM05D001111 ORTHO05D000939 9.7e-07 58.2 126 33.3
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 9.7e-07 58.2 163 30.1
Lalb_Chr13g0297801 Lupinus albus HOM05D001111 ORTHO05D000939 9.7e-07 58.2 116 36.2
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 9.7e-07 58.2 143 32.9
unitig_749.g13278 Utricularia gibba HOM05D001111 ORTHO05D000939 9.7e-07 58.2 132 31.8
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 1.3e-06 57.8 215 28.8
ClCG05G025340 Citrullus lanatus HOM05D001111 ORTHO05D000939 1.7e-06 57.4 124 35.5
Rhsim12G0045800 Rhododendron simsii HOM05D001111 ORTHO05D000939 1.7e-06 57.4 138 30.4
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 2.8e-06 56.6 133 31.6
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 2.8e-06 56.6 142 32.4
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 2.8e-06 56.6 204 30.4
vmacro01168 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 3.7e-06 56.2 137 34.3
VMungo1215G0354 Vigna mungo HOM05D001111 ORTHO05D000939 4.8e-06 55.8 136 33.1
PGR102G1462 Punica granatum HOM05D001111 ORTHO05D000939 6.3e-06 55.5 131 33.6


User provided reference genes

Program Settings