Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 2.4e-46 188.3 85 100.0
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 6.9e-46 186.8 85 98.8
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 2.1e-42 175.3 82 92.7
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 2.1e-42 175.3 82 92.7
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 2.1e-42 175.3 82 92.7
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 4.6e-42 174.1 82 93.9
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 4.6e-42 174.1 82 92.7
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 7.8e-42 173.3 81 91.4
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 1.3e-41 172.6 82 92.7
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 1.3e-41 172.6 82 92.7
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 2.3e-41 171.8 82 89.0
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 5.1e-41 170.6 82 91.5
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 6.6e-41 170.2 82 91.5
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 6.6e-41 170.2 82 91.5
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 1.1e-40 169.5 82 89.0
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 1.1e-40 169.5 82 91.5
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 1.1e-40 169.5 84 85.7
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 1.5e-40 169.1 82 89.0
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.9e-40 168.7 84 85.7
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 1.9e-40 168.7 82 89.0
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 2.5e-40 168.3 81 88.9
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 2.5e-40 168.3 82 90.2
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.5e-40 168.3 82 90.2
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 2.5e-40 168.3 84 84.5
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 3.3e-40 167.9 82 87.8
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 4.3e-40 167.5 82 87.8
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 5.6e-40 167.2 84 86.9
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 5.6e-40 167.2 82 87.8
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 7.3e-40 166.8 82 89.0
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 7.3e-40 166.8 82 87.8
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 9.6e-40 166.4 82 87.8
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 9.6e-40 166.4 82 89.0
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 9.6e-40 166.4 82 86.6
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.3e-39 166.0 82 87.8
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 1.3e-39 166.0 76 92.1
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 2.8e-39 164.9 82 87.8
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 2.8e-39 164.9 82 89.0
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 2.8e-39 164.9 83 86.7
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 2.8e-39 164.9 83 86.7
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.8e-39 164.9 82 84.1
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.6e-39 164.5 82 89.0
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 3.6e-39 164.5 82 86.6
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 4.8e-39 164.1 82 86.6
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 6.2e-39 163.7 79 88.6
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 1.4e-38 162.5 82 87.8
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 2.4e-38 161.8 81 85.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 2.4e-38 161.8 82 85.4
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.1e-38 161.4 82 85.4
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 5.3e-38 160.6 84 81.0
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 5.3e-38 160.6 83 83.1
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 6.9e-38 160.2 83 81.9
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 1.5e-37 159.1 82 84.1
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 2.0e-37 158.7 82 84.1
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 2.0e-37 158.7 82 84.1
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 2.0e-37 158.7 83 83.1
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 3.4e-37 157.9 82 85.4
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 5.8e-37 157.1 82 82.9
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 9.9e-37 156.4 82 84.1
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 1.3e-36 156.0 82 79.3
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 2.2e-36 155.2 82 81.7
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.9e-36 154.8 83 83.1
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 6.4e-36 153.7 82 82.9
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 8.4e-36 153.3 82 82.9
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 8.4e-36 153.3 82 82.9
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 8.4e-36 153.3 82 82.9
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 1.1e-35 152.9 81 82.7
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 1.1e-35 152.9 79 83.5
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 2.4e-35 151.8 82 81.7
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 2.4e-35 151.8 82 81.7
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 2.4e-35 151.8 81 81.5
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 2.4e-35 151.8 82 81.7
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 2.4e-35 151.8 81 81.5
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 2.4e-35 151.8 81 81.5
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 2.4e-35 151.8 82 81.7
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.4e-35 151.8 83 81.9
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 3.2e-35 151.4 81 82.7
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 4.2e-35 151.0 83 80.7
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 5.4e-35 150.6 81 81.5
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 5.4e-35 150.6 79 81.0
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 7.1e-35 150.2 81 80.2
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 7.1e-35 150.2 77 81.8
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 7.1e-35 150.2 77 81.8
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 7.1e-35 150.2 77 81.8
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 7.1e-35 150.2 77 81.8
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 7.1e-35 150.2 84 81.0
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 9.3e-35 149.8 100 68.0
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.5e-34 147.9 82 81.7
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 6.0e-34 147.1 84 79.8
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 7.9e-34 146.7 77 81.8
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 1.3e-33 146.0 81 80.2
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 3.0e-33 144.8 79 78.5
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 1.1e-32 142.9 75 80.0
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 3.3e-32 141.4 81 75.3
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 3.3e-32 141.4 73 82.2
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.8e-31 138.3 84 75.0
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.2e-29 132.9 73 75.3
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.8e-29 130.6 63 87.3
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 7.6e-29 130.2 82 72.0
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 9.9e-29 129.8 59 93.2
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.9e-28 128.3 59 93.2
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 2.4e-27 125.2 59 89.8
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 7.1e-27 123.6 60 81.7
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 1.5e-24 115.9 58 86.2
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 2.4e-22 108.6 50 92.0
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.7e-20 102.4 52 80.8
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 4.2e-19 97.8 64 65.6
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 5.3e-14 80.9 61 57.4
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 1.5e-13 79.3 58 60.3
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.5e-11 70.9 35 85.7
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.7e-10 68.6 32 90.6
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.4e-09 66.2 35 77.1
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 2.5e-08 62.0 36 77.8
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 8.2e-07 57.0 35 71.4


User provided reference genes

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