Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 5.3e-137 491.1 267 100.0
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.6e-104 381.7 270 81.5
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 5.8e-99 364.8 220 89.1
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 1.3e-79 300.4 194 83.5
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 2.5e-54 216.5 270 55.6
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 1.1e-52 211.1 269 51.3
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 1.6e-48 197.2 242 51.7
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 4.6e-48 195.7 242 52.9
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 1.0e-47 194.5 242 53.3
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.8e-44 183.7 252 51.6
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 1.8e-44 183.7 251 53.4
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 1.8e-44 183.7 244 52.5
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 3.1e-44 183.0 253 53.0
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.1e-44 182.6 251 53.0
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 2.2e-42 176.8 249 53.0
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.8e-42 176.0 253 51.0
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.0e-42 175.6 253 51.0
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 8.5e-42 174.9 265 48.7
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.2e-41 172.9 253 50.6
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 7.9e-40 168.3 234 48.7
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 1.0e-39 167.9 255 48.2
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 3.9e-39 166.0 254 47.6
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 3.9e-39 166.0 244 50.4
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 6.7e-39 165.2 247 47.4
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 8.8e-39 164.9 279 47.7
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 7.4e-38 161.8 271 43.2
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 7.4e-38 161.8 272 43.0
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 1.8e-36 157.1 259 47.9
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.8e-36 157.1 254 45.7
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 2.4e-36 156.8 259 46.3
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.1e-36 156.0 254 45.3
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 5.3e-36 155.6 241 49.0
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 6.9e-36 155.2 272 43.8
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 2.0e-35 153.7 239 51.0
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 1.0e-34 151.4 273 42.9
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 1.3e-34 151.0 245 46.5
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 1.7e-34 150.6 243 46.1
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 2.2e-34 150.2 242 46.3
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.8e-34 149.4 251 48.2
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 6.5e-34 148.7 252 46.4
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 6.5e-34 148.7 252 46.4
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 1.1e-33 147.9 245 44.5
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 3.2e-33 146.4 240 45.0
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 3.2e-33 146.4 244 45.1
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 4.2e-33 146.0 254 46.1
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 4.2e-33 146.0 232 47.0
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 5.5e-33 145.6 246 45.1
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 7.2e-33 145.2 289 40.5
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 4.7e-32 142.5 247 45.3
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.1e-30 137.9 240 47.5
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-30 137.9 257 44.0
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.5e-30 137.5 247 44.5
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 2.0e-30 137.1 237 46.4
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.6e-30 136.7 237 44.7
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 4.4e-30 136.0 258 43.0
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 7.4e-30 135.2 214 44.9
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 7.4e-30 135.2 236 41.9
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 1.7e-29 134.0 259 42.1
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 3.7e-29 132.9 246 43.5
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 8.2e-29 131.7 252 42.5
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 1.4e-28 131.0 244 39.3
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 4.1e-28 129.4 272 41.9
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 5.3e-28 129.0 243 41.2
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 5.3e-28 129.0 245 41.2
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 2.0e-27 127.1 244 45.1
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.5e-27 125.9 246 40.2
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 5.9e-27 125.6 250 39.2
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.9e-27 125.6 253 40.7
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 2.2e-26 123.6 239 42.3
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 2.9e-26 123.2 243 39.5
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 3.8e-26 122.9 279 39.8
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.8e-26 122.9 244 40.2
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-25 120.9 240 43.8
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-25 120.9 240 43.8
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 1.5e-25 120.9 247 43.3
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 1.9e-25 120.6 251 43.4
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 3.2e-25 119.8 247 42.9
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 4.2e-25 119.4 248 39.1
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 7.2e-25 118.6 243 38.7
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.2e-24 117.9 258 42.2
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 2.3e-23 113.6 244 36.1
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 3.0e-23 113.2 245 37.1
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 3.0e-23 113.2 245 37.1
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 4.0e-23 112.8 244 39.3
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 4.0e-23 112.8 179 44.7
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 4.0e-23 112.8 207 42.0
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 5.2e-23 112.5 246 37.8
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 6.7e-23 112.1 204 43.6
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 8.8e-23 111.7 254 37.4
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 1.1e-22 111.3 238 38.7
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 1.1e-22 111.3 244 37.3
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 4.4e-22 109.4 245 36.3
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 3.7e-21 106.3 285 40.0
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 4.8e-21 105.9 243 36.2
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 6.3e-21 105.5 240 34.6
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 6.3e-21 105.5 240 34.6
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 1.1e-20 104.8 207 43.5
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 2.4e-20 103.6 250 36.4
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 2.4e-20 103.6 253 35.2
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 3.1e-20 103.2 257 41.2
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 5.3e-20 102.4 239 36.0
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 8.5e-18 95.1 242 33.5
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 8.5e-18 95.1 242 33.5
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 8.5e-18 95.1 242 33.5
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 8.5e-18 95.1 245 34.3
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.5e-17 93.6 243 35.0
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 4.2e-17 92.8 251 35.9
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.2e-16 91.3 228 36.8
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.6e-16 90.9 248 35.5
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 2.7e-16 90.1 225 36.4
PSO170G3450 Papaver somniferum HOM05D003020 ORTHO05D003226 3.6e-16 89.7 289 30.4
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.8e-15 87.4 242 35.5
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 4.0e-15 86.3 311 34.4
Ah.09g229890 Amaranthus hybridus HOM05D003020 ORTHO05D003226 1.2e-14 84.7 188 37.8
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.5e-14 84.3 229 35.4
MBI16_g42581_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D003226 2.6e-14 83.6 207 32.9
MBI16_g41356_MAGBIO Magnolia biondii HOM05D003020 ORTHO05D003226 2.2e-13 80.5 207 32.9
Cc02_g11380 Coffea canephora HOM05D003020 ORTHO05D003226 4.8e-13 79.3 250 32.4
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 6.3e-13 79.0 239 31.0
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 7.0e-12 75.5 249 32.5
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 9.1e-12 75.1 243 30.9
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 2.7e-11 73.6 247 30.4
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 4.5e-11 72.8 235 30.2
BcaNung00532 Brassica carinata HOM05D003020 ORTHO05D003226 5.9e-11 72.4 215 32.6
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.9e-11 72.4 253 29.6
Eucgr.J01120 Eucalyptus grandis HOM05D003020 ORTHO05D003226 7.7e-11 72.0 234 32.1
ATR0580G303 Amborella trichopoda HOM05D003020 ORTHO05D003226 1.0e-10 71.6 242 29.8
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.3e-10 71.2 253 29.6
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.3e-10 71.2 253 29.6
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 1.3e-10 71.2 249 32.1
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-10 70.5 186 35.5
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 3.8e-10 69.7 254 29.9
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 6.5e-10 68.9 229 31.0
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 8.5e-10 68.6 225 28.4
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 1.9e-09 67.4 264 28.8
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 1.9e-09 67.4 250 33.2
Sabra16G0321600 Salix brachista HOM05D003020 ORTHO05D003226 2.5e-09 67.0 189 31.2
Sabra16G0323200 Salix brachista HOM05D003020 ORTHO05D003226 2.5e-09 67.0 188 30.9
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 3.2e-09 66.6 187 32.6
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 4.2e-09 66.2 227 31.3
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 7.2e-09 65.5 232 28.4
Nitab4.5_0000534g0060 Nicotiana tabacum HOM05D003020 ORTHO05D003226 1.2e-08 64.7 241 30.3
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.2e-08 64.7 239 28.9
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.6e-08 64.3 214 29.4
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 1.6e-08 64.3 229 29.3
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 1.6e-08 64.3 243 29.6
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 4.7e-08 62.8 252 31.0
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 4.7e-08 62.8 204 29.9
Ah.14g083800 Amaranthus hybridus HOM05D003020 ORTHO05D003226 8.0e-08 62.0 157 36.9
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 8.0e-08 62.0 203 30.5
Medtr1g095730 Medicago truncatula HOM05D003020 ORTHO05D003226 1.4e-07 61.2 225 24.4
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 1.4e-07 61.2 265 29.4
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 1.8e-07 60.8 204 35.3
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 1.8e-07 60.8 252 29.4
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 3.0e-07 60.1 224 26.8
Duzib106G1942 Durio zibethinus HOM05D003020 ORTHO05D003226 8.8e-07 58.5 243 30.5
FvH4_7g20060 Fragaria vesca HOM05D003020 ORTHO05D003226 8.8e-07 58.5 247 31.6
FAN01G0050 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.8e-07 58.5 254 28.7
FAN01G2565 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.8e-07 58.5 254 28.7
FAN06G2932 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.8e-07 58.5 247 31.6
EL10Ac8g18285 Beta vulgaris HOM05D003020 ORTHO05D003226 2.0e-06 57.4 156 35.9
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 3.4e-06 56.6 245 28.6
Lalb_Chr19g0129551 Lupinus albus HOM05D003020 ORTHO05D003226 3.4e-06 56.6 246 28.9
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 3.4e-06 56.6 246 29.7
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 3.4e-06 56.6 246 32.1
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 4.4e-06 56.2 241 29.0
Cfa001601 Carpinus fangiana HOM05D003020 ORTHO05D003226 5.7e-06 55.8 238 27.7
Gorai.010G204300 Gossypium raimondii HOM05D003020 ORTHO05D003226 7.5e-06 55.5 245 26.1
Manes.10G043600 Manihot esculenta HOM05D003020 ORTHO05D003226 7.5e-06 55.5 190 30.5
Gohir.D06G174600 Gossypium hirsutum HOM05D003020 ORTHO05D003226 9.8e-06 55.1 246 25.6


User provided reference genes

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