Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 6.4e-123 444.1 227 100.0
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 4.3e-111 404.8 227 91.2
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.5e-103 379.0 224 84.8
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.7e-99 366.3 227 81.9
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.4e-99 364.4 224 82.6
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.9e-98 362.8 224 82.1
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 4.2e-98 361.7 219 84.0
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 7.1e-98 360.9 224 81.7
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.5e-97 358.6 213 84.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 6.0e-97 357.8 211 83.9
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.0e-96 357.1 216 84.3
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 3.0e-96 355.5 228 81.1
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 3.0e-96 355.5 213 83.1
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 3.9e-96 355.1 218 83.0
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 5.1e-96 354.8 226 80.1
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 6.6e-96 354.4 227 79.3
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 6.6e-96 354.4 224 78.1
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.5e-95 353.2 228 80.7
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 3.3e-95 352.1 216 81.9
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 4.3e-95 351.7 207 85.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 7.3e-95 350.9 211 82.9
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 9.6e-95 350.5 214 81.3
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 9.6e-95 350.5 221 78.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.3e-94 350.1 213 81.7
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 2.8e-94 349.0 214 80.8
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 2.8e-94 349.0 219 78.5
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 3.6e-94 348.6 244 75.0
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 3.6e-94 348.6 244 75.0
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 3.6e-94 348.6 223 79.4
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 8.1e-94 347.4 211 81.0
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.1e-93 347.1 223 76.2
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.1e-93 347.1 223 76.2
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.4e-93 346.7 207 83.1
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.4e-93 346.7 219 80.4
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.8e-93 346.3 216 81.0
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.8e-93 346.3 207 84.5
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.4e-93 345.9 216 81.0
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.4e-93 345.9 210 84.3
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 3.1e-93 345.5 219 78.5
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 5.3e-93 344.7 219 79.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 6.9e-93 344.4 216 79.6
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 9.0e-93 344.0 212 80.7
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 9.0e-93 344.0 217 78.3
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.2e-92 343.6 214 79.9
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.5e-92 343.2 216 81.5
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.6e-92 342.4 216 79.6
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 4.4e-92 341.7 219 77.2
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 4.4e-92 341.7 217 77.9
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 4.4e-92 341.7 222 78.4
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 9.9e-92 340.5 221 78.7
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 9.9e-92 340.5 221 78.7
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.3e-91 340.1 227 75.8
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.2e-91 339.3 217 79.7
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.2e-91 339.3 215 80.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 4.9e-91 338.2 227 77.1
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 6.4e-91 337.8 214 79.9
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.4e-90 336.7 208 81.7
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.4e-90 336.7 224 76.8
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.4e-90 336.7 224 76.8
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 4.2e-90 335.1 214 79.4
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 5.4e-90 334.7 207 79.7
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 7.1e-90 334.3 226 76.5
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.2e-89 333.6 208 80.3
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 2.7e-89 332.4 213 76.5
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 3.5e-89 332.0 207 79.2
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.5e-89 332.0 198 82.8
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 4.6e-89 331.6 215 77.2
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 6.0e-89 331.3 220 75.9
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 7.8e-89 330.9 207 78.7
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.3e-88 330.1 207 77.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 2.3e-88 329.3 219 75.8
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 3.0e-88 328.9 250 70.0
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 3.9e-88 328.6 212 78.3
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.1e-88 328.2 207 77.8
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 8.7e-88 327.4 209 78.9
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.1e-87 327.0 223 78.0
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.9e-87 326.2 247 70.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.4e-85 320.1 219 77.2
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.8e-85 319.7 207 77.3
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.0e-84 316.2 207 75.8
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 3.4e-84 315.5 195 81.5
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.2e-83 312.8 223 73.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.9e-83 312.4 197 79.2
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 3.8e-83 312.0 206 77.2
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.4e-82 310.1 212 75.0
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.4e-82 309.3 216 75.0
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.2e-82 308.9 192 80.2
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 5.1e-80 301.6 183 80.3
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 6.5e-75 284.6 207 67.6
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 4.2e-74 282.0 196 74.5
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.1e-74 281.2 170 85.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 7.1e-74 281.2 173 82.7
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.2e-73 280.4 206 66.0
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 3.5e-73 278.9 214 66.8
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 1.0e-72 277.3 202 73.8
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.3e-72 276.9 216 69.9
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 8.2e-70 267.7 207 65.2
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.8e-69 266.5 207 65.2
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 5.8e-68 261.5 173 79.2
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 5.0e-67 258.5 222 65.3
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.2e-66 255.8 154 86.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.7e-65 252.7 225 61.8
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.2e-57 227.3 143 83.2
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 6.1e-57 224.9 138 84.1
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 6.1e-57 224.9 140 78.6
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 8.5e-51 204.5 183 62.8
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.7e-46 190.3 113 82.3
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 6.3e-46 188.3 120 79.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 5.3e-45 185.3 138 67.4
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-37 161.0 108 75.9
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 9.1e-37 157.9 137 65.0
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.2e-34 149.4 115 67.8
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.4e-31 139.0 211 39.3
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 5.7e-31 138.7 85 75.3
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.3e-30 137.5 204 36.8
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 7.0e-29 131.7 196 36.7
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 4.7e-25 119.0 101 63.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 8.0e-25 118.2 101 62.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.4e-21 107.5 78 75.6
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 5.9e-20 102.1 116 53.4
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.3e-18 96.3 59 74.6
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 9.5e-18 94.7 71 54.9
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 6.4e-06 55.5 50 64.0


User provided reference genes

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