Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.1e-132 475.7 239 100.0
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 4.1e-120 434.9 239 91.2
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 1.3e-118 429.9 239 90.0
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.4e-117 426.4 239 89.1
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 1.0e-115 420.2 239 87.9
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 1.0e-115 420.2 241 88.0
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.4e-115 419.9 239 87.9
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 3.9e-115 418.3 239 87.9
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 5.1e-115 417.9 239 87.0
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 1.1e-114 416.8 239 87.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.3e-114 415.2 239 87.4
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 5.7e-114 414.5 247 85.4
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 7.4e-114 414.1 234 88.0
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 6.3e-113 411.0 241 83.8
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 8.2e-113 410.6 239 86.2
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 1.1e-112 410.2 239 86.2
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 1.1e-112 410.2 239 86.2
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 1.1e-112 410.2 239 85.8
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 1.5e-111 406.4 239 85.4
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 2.0e-111 406.0 239 84.5
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 2.0e-111 406.0 231 87.4
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.6e-111 405.6 235 85.5
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 2.6e-111 405.6 239 85.4
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 5.9e-111 404.4 239 84.5
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 5.9e-111 404.4 239 84.5
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 1.0e-110 403.7 235 85.1
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.0e-110 403.7 235 85.1
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 1.3e-110 403.3 239 83.7
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.3e-110 403.3 235 84.7
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.3e-110 403.3 235 84.7
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 2.2e-110 402.5 239 84.1
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.9e-110 402.1 235 84.3
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 5.0e-110 401.4 239 84.1
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 6.5e-110 401.0 239 83.7
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 8.5e-110 400.6 239 83.3
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 2.5e-109 399.1 225 88.0
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 3.2e-109 398.7 239 84.9
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 3.2e-109 398.7 239 83.7
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 9.4e-109 397.1 239 84.1
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 1.6e-108 396.4 239 82.4
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 3.6e-108 395.2 239 83.3
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.7e-108 394.8 230 84.3
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 6.1e-108 394.4 239 82.4
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 6.1e-108 394.4 239 82.8
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.4e-107 393.3 239 81.2
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 2.3e-107 392.5 239 82.4
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 3.0e-107 392.1 239 82.0
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 3.0e-107 392.1 240 82.9
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 3.0e-107 392.1 239 81.6
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 6.7e-107 391.0 223 84.8
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 6.7e-107 391.0 223 84.8
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 6.7e-107 391.0 227 83.7
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 8.8e-107 390.6 235 83.0
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 1.5e-106 389.8 240 81.2
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.5e-106 389.8 239 81.2
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 2.0e-106 389.4 240 82.1
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 4.4e-106 388.3 239 80.3
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 5.7e-106 387.9 239 79.9
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 9.7e-106 387.1 239 80.8
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.2e-105 386.0 237 81.4
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 1.1e-104 383.6 225 82.7
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 3.1e-104 382.1 239 79.9
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 3.1e-104 382.1 228 82.9
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 4.1e-104 381.7 240 78.3
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 4.1e-104 381.7 239 79.5
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 7.0e-104 380.9 230 81.3
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.6e-103 379.8 239 80.3
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 2.0e-103 379.4 225 81.8
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 2.6e-103 379.0 240 80.8
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 2.6e-103 379.0 239 77.4
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 7.7e-103 377.5 239 78.7
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 1.0e-102 377.1 239 80.8
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 1.0e-102 377.1 225 80.9
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 2.2e-102 375.9 241 78.0
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 2.9e-102 375.6 239 78.2
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 6.5e-102 374.4 221 82.4
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 8.5e-102 374.0 239 77.0
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 8.5e-102 374.0 239 77.0
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 8.5e-102 374.0 239 77.4
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.1e-101 373.6 240 77.5
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 1.1e-101 373.6 224 80.8
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 1.5e-101 373.2 239 76.6
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 2.5e-101 372.5 224 80.8
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 3.2e-101 372.1 240 77.5
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 3.2e-101 372.1 228 78.5
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 4.2e-101 371.7 239 77.4
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 9.4e-101 370.5 239 77.8
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 1.2e-100 370.2 231 78.8
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 1.2e-100 370.2 237 76.8
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.6e-100 369.8 237 78.1
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 2.1e-100 369.4 239 76.6
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 2.1e-100 369.4 240 77.1
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 6.1e-100 367.9 228 78.9
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 8.0e-100 367.5 227 79.3
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.8e-99 366.3 225 81.3
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.3e-99 365.9 239 77.8
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 3.0e-99 365.5 228 80.3
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 4.0e-99 365.2 240 75.8
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 4.0e-99 365.2 233 77.7
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 8.8e-99 364.0 231 78.4
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 3.3e-98 362.1 225 78.2
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 3.7e-97 358.6 227 76.7
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 1.1e-96 357.1 227 78.9
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 2.0e-95 352.8 261 69.0
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 2.0e-95 352.8 239 77.4
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 3.5e-95 352.1 304 61.8
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.2e-94 349.4 239 77.0
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 2.5e-93 345.9 240 75.8
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 5.5e-93 344.7 333 58.9
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 9.4e-93 344.0 227 72.2
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.0e-91 340.5 230 75.2
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 3.4e-90 335.5 187 88.2
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 9.8e-90 334.0 221 71.9
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 3.7e-89 332.0 219 75.3
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 3.1e-88 328.9 188 83.5
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 7.0e-88 327.8 239 69.9
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 7.7e-87 324.3 239 69.0
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 5.5e-85 318.2 229 67.7
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 9.5e-85 317.4 198 80.3
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.2e-84 317.0 229 67.2
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 3.6e-84 315.5 198 78.3
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 1.0e-83 313.9 227 63.9
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.4e-83 313.5 200 78.0
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 4.4e-82 308.5 232 69.4
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 4.9e-73 278.5 168 81.0
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 3.2e-72 275.8 197 69.5
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 8.0e-68 261.2 154 83.1
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.3e-65 253.8 226 61.1
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 6.4e-57 224.9 218 52.3
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 8.3e-57 224.6 150 69.3
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 6.6e-46 188.3 119 72.3
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 2.3e-38 163.3 106 82.1
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 2.6e-34 149.8 189 38.6
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.6e-31 140.6 97 76.3
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 2.1e-23 113.6 208 32.2
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.2e-10 71.2 74 48.6


User provided reference genes

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