Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 1.4e-145 519.6 260 100.0
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 7.8e-133 477.2 250 95.2
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 7.8e-109 397.5 258 76.7
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 1.3e-108 396.7 261 76.2
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 5.1e-108 394.8 261 75.5
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.5e-104 383.3 258 75.2
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.4e-102 376.7 261 72.0
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.9e-102 376.3 264 71.2
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.4e-102 375.9 263 73.8
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 5.4e-102 374.8 259 71.4
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 7.8e-101 370.9 263 71.5
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.7e-100 369.8 260 71.5
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 2.3e-100 369.4 262 69.8
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.3e-100 369.4 263 71.1
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.5e-99 366.7 259 70.3
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.9e-99 366.3 257 72.0
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.6e-98 363.2 245 73.1
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 4.8e-98 361.7 253 71.9
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 8.1e-98 360.9 261 69.0
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 8.1e-98 360.9 249 71.5
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.1e-97 360.5 284 66.2
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.4e-97 360.1 261 69.7
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.1e-97 359.0 258 72.9
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 2.0e-96 356.3 249 70.3
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 2.6e-96 355.9 265 67.5
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 2.6e-96 355.9 261 68.6
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 4.5e-96 355.1 267 66.7
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.3e-95 353.6 264 66.7
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.2e-95 352.8 261 70.1
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.9e-95 352.4 255 71.0
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.8e-95 352.1 255 71.0
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 6.4e-95 351.3 255 70.6
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 6.4e-95 351.3 262 66.8
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 8.4e-95 350.9 264 65.9
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 8.4e-95 350.9 267 64.0
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 1.1e-94 350.5 260 69.6
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.1e-94 350.5 248 69.0
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.4e-94 350.1 267 64.8
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 2.4e-94 349.4 261 65.9
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.4e-94 349.4 253 69.2
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 3.2e-94 349.0 261 69.3
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 4.2e-94 348.6 270 64.4
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 4.2e-94 348.6 264 66.3
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 5.4e-94 348.2 257 66.9
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 5.4e-94 348.2 262 66.4
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 5.4e-94 348.2 254 69.3
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 9.3e-94 347.4 261 66.3
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.6e-93 346.7 288 63.9
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 2.1e-93 346.3 261 67.4
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 2.7e-93 345.9 261 65.5
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 2.7e-93 345.9 261 65.9
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 4.6e-93 345.1 264 67.4
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 4.6e-93 345.1 274 63.1
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 4.6e-93 345.1 258 67.8
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.8e-92 343.2 268 65.7
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 2.3e-92 342.8 251 66.5
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 2.5e-91 339.3 261 65.5
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.6e-91 338.2 261 65.1
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 7.4e-91 337.8 261 65.1
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 9.6e-91 337.4 264 68.6
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 1.6e-90 336.7 255 67.1
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 4.8e-90 335.1 255 67.1
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 2.4e-89 332.8 243 67.5
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.4e-89 332.8 241 71.8
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 3.1e-89 332.4 243 66.3
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 3.1e-89 332.4 243 66.3
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 9.0e-89 330.9 261 65.1
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.0e-88 329.7 247 65.2
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.0e-88 329.7 266 63.2
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.0e-88 329.7 249 65.9
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 2.6e-88 329.3 270 63.0
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 3.4e-88 328.9 243 65.8
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 4.5e-88 328.6 272 62.5
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 5.8e-88 328.2 240 66.2
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 5.8e-88 328.2 244 66.0
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 1.7e-87 326.6 243 66.7
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 2.9e-87 325.9 253 63.2
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 3.8e-87 325.5 243 65.0
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 6.4e-87 324.7 254 66.1
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 8.4e-87 324.3 240 65.8
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 8.4e-87 324.3 243 65.4
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 2.4e-86 322.8 262 65.3
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 9.3e-86 320.9 237 65.8
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.7e-85 319.3 248 64.9
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 3.5e-85 318.9 242 63.2
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 5.1e-84 315.1 248 63.7
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 6.7e-84 314.7 260 61.5
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 4.3e-83 312.0 249 63.1
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 7.4e-83 311.2 256 62.1
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.8e-81 306.6 240 63.8
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 4.5e-80 302.0 247 62.3
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 7.6e-80 301.2 237 64.1
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.5e-78 296.2 288 57.6
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 5.5e-78 295.0 232 64.2
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-76 290.4 225 65.8
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 3.3e-75 285.8 235 62.6
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 2.0e-72 276.6 253 57.7
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 4.5e-72 275.4 226 63.7
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 7.6e-72 274.6 220 63.2
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.2e-71 273.1 226 62.8
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 1.1e-70 270.8 278 50.0
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 1.0e-68 264.2 174 76.4
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.0e-68 264.2 277 49.8
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 3.1e-65 252.7 263 50.6
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.9e-62 243.4 218 56.4
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.2e-61 240.7 198 63.6
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.7e-61 239.6 174 69.5
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.5e-59 233.8 220 55.5
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 6.9e-57 224.9 174 67.8
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.2e-56 224.2 178 64.0
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.2e-56 224.2 174 64.9
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.8e-52 210.3 152 66.4
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 5.7e-51 205.3 234 47.0
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.7e-50 203.8 150 70.7
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.1e-45 185.3 143 65.7
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 8.0e-45 184.9 675 26.5
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.4e-44 184.1 249 43.4
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 2.2e-42 176.8 130 72.3
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.4e-41 173.3 143 64.3
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.0e-41 171.8 143 64.3
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 1.3e-39 167.5 219 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 5.0e-39 165.6 172 50.6
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 2.6e-35 153.3 124 58.9
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 8.3e-34 148.3 109 65.1
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.3e-31 140.2 95 72.6
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 2.3e-28 130.2 108 60.2
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.3e-26 124.4 120 60.8
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.1e-25 119.8 87 63.2
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 3.5e-24 116.3 92 59.8
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 4.5e-24 115.9 87 67.8
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 4.5e-24 115.9 87 67.8
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.3e-23 113.6 129 48.8
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 7.3e-22 108.6 88 58.0
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.6e-16 89.4 248 32.3
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 7.3e-14 82.0 235 30.6
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 4.9e-10 69.3 76 50.0
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.2e-09 65.1 76 47.4
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.2e-09 65.1 76 47.4


User provided reference genes

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