Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 6.9e-75 283.9 143 100.0
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.5e-66 254.6 144 90.3
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 2.6e-45 185.7 143 67.8
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.3e-44 183.3 146 69.2
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 4.8e-44 181.4 147 66.7
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 6.3e-44 181.0 143 66.4
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 8.3e-44 180.6 149 65.1
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 7.0e-43 177.6 148 66.9
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.6e-42 176.4 148 64.2
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 3.5e-42 175.3 148 65.5
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 3.5e-42 175.3 143 63.6
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 5.9e-42 174.5 148 65.5
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 5.9e-42 174.5 162 60.5
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.0e-41 173.7 149 66.4
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 2.3e-41 172.6 155 63.2
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 6.5e-41 171.0 145 63.4
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 8.6e-41 170.6 131 67.9
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.1e-40 170.2 145 64.8
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 1.9e-40 169.5 155 61.3
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 2.5e-40 169.1 146 60.3
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.5e-40 169.1 145 63.4
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 4.2e-40 168.3 145 58.6
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 4.2e-40 168.3 146 63.7
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 4.2e-40 168.3 151 59.6
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 4.2e-40 168.3 145 62.8
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 5.5e-40 167.9 143 65.0
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 5.5e-40 167.9 142 59.2
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.2e-39 166.8 150 59.3
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.6e-39 166.4 143 60.8
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.6e-39 166.4 150 62.0
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.1e-39 166.0 145 62.8
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 2.8e-39 165.6 147 61.9
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 3.6e-39 165.2 109 74.3
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.7e-39 164.9 98 75.5
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 6.1e-39 164.5 143 59.4
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 1.0e-38 163.7 154 58.4
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.4e-38 163.3 149 62.4
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 1.4e-38 163.3 146 60.3
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.4e-38 163.3 98 79.6
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.8e-38 162.9 126 65.1
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.0e-38 162.2 143 58.0
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.0e-38 162.2 143 58.0
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 4.0e-38 161.8 146 60.3
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 5.2e-38 161.4 150 60.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 6.8e-38 161.0 110 72.7
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 8.9e-38 160.6 115 70.4
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.2e-37 160.2 114 65.8
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.0e-37 159.5 148 62.2
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.0e-37 159.5 98 79.6
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.0e-37 159.5 98 76.5
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 2.0e-37 159.5 128 60.2
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 2.6e-37 159.1 98 77.6
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 3.4e-37 158.7 149 59.7
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 3.4e-37 158.7 146 58.9
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 4.4e-37 158.3 158 53.8
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 7.5e-37 157.5 146 61.6
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 3.7e-36 155.2 98 77.6
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.4e-35 153.3 153 52.9
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.8e-35 152.9 146 54.8
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.8e-35 152.9 150 55.3
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.8e-35 152.9 150 55.3
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 2.4e-35 152.5 100 72.0
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 4.1e-35 151.8 149 54.4
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.1e-35 151.8 121 59.5
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 5.4e-35 151.4 149 54.4
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 7.0e-35 151.0 95 75.8
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.6e-34 149.8 117 66.7
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.7e-34 149.1 141 59.6
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 3.5e-34 148.7 147 53.7
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 4.5e-34 148.3 108 65.7
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 4.5e-34 148.3 115 62.6
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 7.8e-34 147.5 100 68.0
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.3e-33 146.7 120 63.3
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.7e-33 146.4 109 67.0
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.3e-33 146.0 97 71.1
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.9e-33 145.6 97 72.2
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 2.9e-33 145.6 124 62.1
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 3.8e-33 145.2 169 52.1
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 6.6e-33 144.4 97 70.1
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.5e-32 143.3 119 60.5
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.9e-32 142.9 103 67.0
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 2.5e-32 142.5 100 66.0
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 2.5e-32 142.5 165 48.5
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.3e-32 142.1 97 70.1
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 3.3e-32 142.1 101 65.3
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 3.3e-32 142.1 100 69.0
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 5.6e-32 141.4 157 50.3
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 7.3e-32 141.0 101 64.4
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.2e-31 140.2 98 67.3
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.2e-31 140.2 98 66.3
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 1.6e-31 139.8 93 68.8
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.6e-31 139.8 148 51.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 2.1e-31 139.4 102 65.7
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 2.8e-31 139.0 117 59.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 2.8e-31 139.0 103 65.0
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.6e-31 138.7 147 50.3
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 1.0e-30 137.1 147 49.0
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.4e-30 136.7 108 59.3
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 2.3e-30 136.0 113 55.8
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 3.0e-30 135.6 100 66.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 3.0e-30 135.6 147 51.7
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 5.2e-30 134.8 150 50.7
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 5.2e-30 134.8 148 56.8
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 2.4e-27 125.9 95 65.3
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 2.0e-26 122.9 98 67.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.7e-26 122.5 120 58.3
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 1.5e-24 116.7 109 62.4
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 2.5e-24 115.9 74 74.3
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 9.5e-24 114.0 198 37.9
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.7e-20 103.2 130 40.8
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.9e-20 102.4 79 64.6
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.4e-19 99.4 55 83.6
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 2.7e-18 95.9 99 52.5
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 6.0e-18 94.7 109 44.0
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 5.0e-17 91.7 111 40.5
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 5.0e-17 91.7 111 40.5
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.9e-16 89.7 96 43.8
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.3e-14 82.8 60 70.0
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.1e-11 73.9 126 37.3
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 5.4e-11 71.6 55 63.6
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 2.8e-07 59.3 96 33.3
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 8.9e-06 54.3 129 33.3


User provided reference genes

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