Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.8e-202 709.1 385 100.0
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.6e-187 658.3 401 90.3
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 7.4e-180 634.0 382 84.8
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 3.0e-173 612.1 382 88.2
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 9.6e-172 607.1 384 86.5
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.9e-168 595.5 382 83.2
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 9.3e-167 590.5 370 85.4
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.3e-165 586.6 377 85.7
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.1e-164 583.6 383 80.2
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.5e-164 582.4 383 80.2
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.3e-164 581.6 380 80.8
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 5.7e-164 581.3 378 82.5
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.6e-164 580.5 383 79.9
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 6.9e-162 574.3 370 83.5
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 6.9e-162 574.3 371 82.5
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.5e-161 573.2 386 80.8
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 4.5e-161 571.6 377 80.4
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 5.9e-161 571.2 365 84.4
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 2.9e-160 568.9 373 80.7
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 2.9e-160 568.9 380 78.9
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.4e-159 566.6 370 82.7
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.4e-159 566.6 383 76.0
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 5.5e-159 564.7 369 83.2
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 5.5e-159 564.7 369 81.8
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 5.5e-159 564.7 366 82.5
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 7.2e-159 564.3 383 82.8
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 7.2e-159 564.3 384 75.3
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 7.2e-159 564.3 384 78.9
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 7.2e-159 564.3 384 78.9
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.6e-158 563.1 360 83.1
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.6e-158 563.1 374 80.7
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 2.1e-158 562.8 366 82.5
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 2.1e-158 562.8 366 82.5
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 2.1e-158 562.8 368 81.0
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.1e-158 562.8 366 82.8
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.7e-158 562.4 383 75.7
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 3.6e-158 562.0 354 83.9
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.8e-157 559.7 376 80.3
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.3e-157 559.3 362 84.8
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 3.0e-157 558.9 384 74.2
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 5.1e-157 558.1 365 82.2
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 5.1e-157 558.1 378 78.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.1e-157 558.1 378 78.8
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 8.7e-157 557.4 347 81.8
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-156 557.0 362 84.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.1e-156 557.0 362 84.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.5e-156 556.6 375 77.9
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.5e-156 555.8 360 79.7
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 4.3e-156 555.1 363 82.4
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 4.3e-156 555.1 383 77.5
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 5.7e-156 554.7 373 80.2
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 7.4e-156 554.3 370 78.1
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.7e-156 553.9 374 79.7
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 9.7e-156 553.9 360 80.6
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.3e-155 553.5 374 79.9
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.3e-155 553.5 360 82.2
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.6e-155 553.1 372 79.6
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.8e-155 552.4 374 79.9
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.7e-155 552.0 377 75.9
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.7e-155 552.0 365 79.2
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 8.2e-155 550.8 370 79.7
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 8.2e-155 550.8 360 81.7
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 6.9e-154 547.7 395 78.7
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.5e-153 546.6 384 79.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 2.0e-153 546.2 314 85.7
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.6e-153 545.8 375 80.8
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.6e-153 545.8 372 75.8
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 7.7e-153 544.3 374 79.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.0e-152 543.9 392 78.1
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.9e-152 542.3 318 84.9
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 5.0e-152 541.6 382 74.3
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 5.0e-152 541.6 318 84.6
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 6.5e-152 541.2 327 82.0
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.1e-151 540.4 388 72.7
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.4e-151 540.0 392 78.1
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.4e-151 540.0 362 76.8
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.9e-151 539.7 375 76.3
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.5e-151 539.3 372 78.2
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.5e-151 539.3 386 75.6
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.5e-151 539.3 356 76.7
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.2e-151 538.5 318 84.3
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 5.5e-151 538.1 359 76.6
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 7.2e-151 537.7 374 77.0
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 9.4e-151 537.3 365 75.3
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.6e-150 536.6 371 73.9
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.1e-150 536.2 369 75.9
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 6.1e-150 534.6 370 74.6
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.3e-149 532.7 369 74.8
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 2.3e-149 532.7 383 74.7
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.9e-149 531.9 359 78.6
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.7e-149 531.2 362 74.6
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 6.7e-149 531.2 368 73.1
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.5e-148 530.0 380 72.4
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 2.6e-148 529.3 382 72.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.6e-148 529.3 372 73.1
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.3e-148 528.9 374 75.9
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 3.3e-148 528.9 372 72.8
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.4e-148 528.5 380 73.9
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 7.4e-148 527.7 361 77.8
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.3e-147 526.9 380 71.8
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.7e-147 526.6 387 74.4
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 2.8e-147 525.8 314 82.5
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 3.7e-147 525.4 384 71.1
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 8.2e-147 524.2 401 71.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.4e-146 523.5 378 70.4
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.4e-146 523.5 368 73.6
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.4e-146 523.5 320 79.7
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.8e-146 523.1 381 70.9
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.0e-144 517.3 459 65.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 8.5e-144 514.2 306 82.4
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.4e-143 513.5 379 72.8
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.4e-143 513.5 368 71.5
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.9e-143 513.1 318 80.8
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.2e-142 510.4 402 67.9
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 5.2e-141 505.0 306 80.7
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.5e-140 503.4 315 79.4
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-140 503.4 289 84.1
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.7e-139 500.0 370 71.1
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 3.7e-139 498.8 379 71.2
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 8.2e-139 497.7 314 77.1
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 5.3e-138 495.0 300 81.3
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.0e-136 490.7 348 71.3
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 5.0e-136 488.4 347 71.5
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 6.5e-136 488.0 317 83.6
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.5e-135 486.9 382 70.9
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-135 486.5 363 74.9
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 9.4e-135 484.2 383 72.6
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 3.0e-133 479.2 386 68.9
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.2e-131 473.0 272 83.5
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.4e-130 470.3 298 84.2
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 9.1e-130 467.6 397 63.5
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.1e-127 460.7 396 65.7
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 7.2e-127 458.0 320 74.7
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 5.7e-124 448.4 333 64.3
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 9.8e-124 447.6 278 79.9
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.7e-123 445.7 360 68.9
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 3.8e-120 435.6 302 68.9
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.2e-119 432.2 372 64.8
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.3e-117 426.4 301 68.4
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 8.8e-117 424.5 319 66.5
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.5e-116 423.7 243 84.8
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.6e-116 422.9 322 64.6
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.7e-115 420.2 368 67.9
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.7e-115 419.1 363 65.0
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 5.4e-114 415.2 302 64.6
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 4.3e-111 405.6 224 89.3
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.6e-110 402.5 304 64.1
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 7.5e-108 394.8 430 54.4
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.0e-96 357.8 242 75.6
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 4.4e-92 342.4 301 58.1
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 5.8e-84 315.5 214 70.1
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 4.3e-79 299.3 260 65.8
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.5e-65 253.1 374 47.6
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 2.3e-64 250.4 151 82.1
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.1e-55 221.5 190 58.9
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 2.6e-52 210.3 170 68.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 8.5e-43 178.7 204 52.5
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 3.9e-32 143.3 93 77.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-27 127.5 106 63.2
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.8e-27 126.7 281 31.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.0e-24 118.6 339 28.9
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 3.7e-22 110.2 65 78.5
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.1e-21 107.1 248 33.5
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 7.0e-21 105.9 298 26.8
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.1e-18 98.6 78 67.9
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 1.6e-17 94.7 65 75.4
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 1.6e-17 94.7 65 75.4
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 3.6e-17 93.6 65 75.4
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 8.0e-17 92.4 90 72.2
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.3e-16 90.9 91 72.5
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.7e-16 89.4 380 25.8
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 9.7e-15 85.5 59 71.2
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 5.5e-10 69.7 108 35.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 3.6e-09 67.0 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 5.2e-08 63.2 49 63.3
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.5e-07 61.6 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.6e-07 60.8 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 4.4e-07 60.1 39 71.8
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 2.2e-06 57.8 72 66.7


User provided reference genes

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