Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G047201 Populus trichocarpa HOM05D001276 ORTHO05D001085 1.1e-54 216.5 114 100.0
Potri.006G217800 Populus trichocarpa HOM05D001276 ORTHO05D001085 6.0e-37 157.5 103 81.6
Manes.03G055600 Manihot esculenta HOM05D001276 ORTHO05D001085 5.6e-27 124.4 104 67.3
Manes.16G087900 Manihot esculenta HOM05D001276 ORTHO05D001085 2.1e-26 122.5 103 65.0
Thecc.09G066600 Theobroma cacao HOM05D001276 ORTHO05D001085 1.0e-20 103.6 104 60.6
Duzib187G1045 Durio zibethinus HOM05D001276 ORTHO05D001085 1.1e-19 100.1 104 57.7
Duzib168G1696 Durio zibethinus HOM05D001276 ORTHO05D001085 1.5e-19 99.8 104 57.7
COL.COLO4_21170 Corchorus olitorius HOM05D001276 ORTHO05D001085 7.3e-19 97.4 104 57.7
Ciclev10010174m.g Citrus clementina HOM05D001276 ORTHO05D001085 1.6e-18 96.3 107 57.9
TWI32G0332 Tripterygium wilfordii HOM05D001276 ORTHO05D001085 1.4e-17 93.2 103 56.3
Atru.chr7.1813 Acer truncatum HOM05D001276 ORTHO05D001085 4.0e-17 91.7 105 55.2
TWI34G0596 Tripterygium wilfordii HOM05D001276 ORTHO05D001085 5.3e-17 91.3 105 56.2
Cc07_g12250 Coffea canephora HOM05D001276 ORTHO05D001085 4.2e-14 81.6 104 52.9
FvH4_7g04450 Fragaria vesca HOM05D001276 ORTHO05D001085 1.6e-13 79.7 104 51.0
FAN01G3041 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-13 79.7 104 51.0
FAN06G3313 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-13 79.7 104 51.0
FAN06G4055 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-13 79.7 104 51.0
FAN10G0664 Fragaria x ananassa HOM05D001276 ORTHO05D001085 1.6e-13 79.7 104 51.0
FAN03G2420 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.1e-13 79.3 104 51.0
RcHm_v2.0_Chr2g0146771 Rosa chinensis HOM05D001276 ORTHO05D001085 2.1e-13 79.3 105 51.4
VMungo0331G0272 Vigna mungo HOM05D001276 ORTHO05D001085 1.3e-12 76.6 105 46.7
Gohir.D06G080800 Gossypium hirsutum HOM05D001276 ORTHO05D001085 1.8e-12 76.3 105 50.5
Gorai.010G094200 Gossypium raimondii HOM05D001276 ORTHO05D001085 1.8e-12 76.3 105 50.5
Dinv20399 Davidia involucrata HOM05D001276 ORTHO05D001085 3.9e-12 75.1 105 52.4
Gohir.A06G081200 Gossypium hirsutum HOM05D001276 ORTHO05D001085 3.9e-12 75.1 105 50.5
Lj9A536T71 Lonicera japonica HOM05D001276 ORTHO05D001085 4.3e-11 71.6 107 50.5
Prupe.3G035800 Prunus persica HOM05D001276 ORTHO05D001085 9.6e-11 70.5 104 49.0
Aqoxy7G00989 Aquilegia oxysepala HOM05D001276 ORTHO05D001085 1.3e-10 70.1 104 48.1
Actinidia26008 Actinidia chinensis HOM05D001276 ORTHO05D001085 3.6e-10 68.6 104 46.2
Peaxi162Scf00431g00312 Petunia axillaris HOM05D001276 ORTHO05D001085 1.4e-09 66.6 104 46.2
Lj9A536T70 Lonicera japonica HOM05D001276 ORTHO05D001085 1.8e-09 66.2 93 49.5
Glyma.07G042900 Glycine max HOM05D001276 ORTHO05D001085 2.4e-09 65.9 105 45.7
Nitab4.5_0000235g0190 Nicotiana tabacum HOM05D001276 ORTHO05D001085 3.1e-09 65.5 69 59.4
CANSAT56G1768 Cannabis sativa HOM05D001276 ORTHO05D001085 5.3e-09 64.7 108 44.4
Solyc02g038720.2 Solanum lycopersicum HOM05D001276 ORTHO05D001085 6.9e-09 64.3 104 46.2
Phvul.010G126500 Phaseolus vulgaris HOM05D001276 ORTHO05D001085 1.2e-08 63.5 104 43.3
MD17G1150100 Malus domestica HOM05D001276 ORTHO05D001085 2.0e-08 62.8 72 55.6
PGSC0003DMG400034344 Solanum tuberosum HOM05D001276 ORTHO05D001085 4.5e-08 61.6 57 63.2
DCAR_026428 Daucus carota HOM05D001276 ORTHO05D001085 7.6e-08 60.8 111 48.6
Lsat_1_v5_gn_4_91621 Lactuca sativa HOM05D001276 ORTHO05D001085 1.7e-07 59.7 106 46.2
Dinv37841 Davidia involucrata HOM05D001276 ORTHO05D001085 3.8e-07 58.5 64 59.4
CsaV3_7G034160 Cucumis sativus L. HOM05D001276 ORTHO05D001085 8.4e-07 57.4 104 38.5
MD09G1176700 Malus domestica HOM05D001276 ORTHO05D001085 1.4e-06 56.6 69 53.6
CiPaw.02G133300 Carya illinoinensis HOM05D001276 ORTHO05D001085 1.9e-06 56.2 70 51.4
GSVIVG01016702001 Vitis vinifera HOM05D001276 ORTHO05D001085 4.2e-06 55.1 109 43.1
ATR0681G319 Amborella trichopoda HOM05D001276 ORTHO05D001085 7.1e-06 54.3 40 72.5
Peaxi162Scf00861g00325 Petunia axillaris HOM05D001276 ORTHO05D001085 7.1e-06 54.3 95 44.2
ClCG09G001210 Citrullus lanatus HOM05D001276 ORTHO05D001085 9.3e-06 53.9 104 39.4


User provided reference genes

Program Settings