Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.3e-165 585.5 289 100.0
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 1.5e-124 449.9 293 77.1
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.3e-124 448.7 295 77.3
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 4.5e-113 411.8 295 69.8
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 5.8e-113 411.4 283 71.7
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 4.2e-111 405.2 283 71.0
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 3.5e-110 402.1 284 70.8
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 3.5e-110 402.1 284 70.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 4.6e-110 401.7 283 71.4
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 2.3e-109 399.4 284 70.4
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 6.7e-109 397.9 287 70.7
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.1e-108 397.1 284 70.8
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 1.5e-108 396.7 289 68.5
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.9e-108 396.4 286 69.6
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 2.5e-108 396.0 286 69.9
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 3.3e-108 395.6 291 69.8
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.6e-107 393.3 302 69.9
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 6.2e-107 391.3 280 69.6
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 2.4e-106 389.4 287 69.3
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 4.0e-106 388.7 284 68.7
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.6e-105 386.0 289 68.9
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 2.6e-105 386.0 290 66.9
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 3.4e-105 385.6 278 69.4
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 1.3e-104 383.6 290 66.2
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.3e-104 383.6 283 68.9
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 3.8e-104 382.1 280 69.6
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 2.5e-103 379.4 280 68.6
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.2e-102 377.1 286 66.8
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.8e-101 373.2 284 68.3
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.8e-101 373.2 284 68.3
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 1.8e-101 373.2 285 67.7
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.1e-100 370.5 290 65.2
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.9e-100 369.8 288 66.3
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 2.1e-99 366.3 280 67.9
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.4e-98 363.6 285 65.6
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 6.9e-98 361.3 285 64.9
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 5.5e-95 351.7 284 62.7
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 9.3e-95 350.9 281 63.3
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.7e-94 349.4 286 62.2
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 3.3e-92 342.4 280 62.5
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 2.2e-91 339.7 264 66.7
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 2.8e-91 339.3 286 61.9
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.4e-90 337.0 283 61.5
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 1.8e-90 336.7 286 63.3
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.8e-90 336.7 289 60.2
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 4.1e-90 335.5 282 62.4
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 9.0e-90 334.3 287 62.0
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 2.0e-89 333.2 286 62.6
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 2.6e-89 332.8 282 61.7
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.4e-89 332.4 280 62.1
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 5.0e-88 328.6 286 59.4
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.1e-87 327.4 284 59.2
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 1.9e-87 326.6 281 60.9
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 2.5e-87 326.2 287 59.9
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 6.1e-86 321.6 290 59.0
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 3.0e-85 319.3 280 60.4
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.0e-85 319.3 280 60.4
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 3.3e-84 315.8 287 57.8
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 9.7e-84 314.3 237 67.9
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.8e-83 312.8 288 57.6
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.8e-83 312.0 286 57.3
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.4e-82 309.7 251 64.5
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.1e-82 309.3 288 56.9
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 5.3e-82 308.5 289 58.5
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.2e-81 307.4 289 57.8
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 4.5e-81 305.4 280 58.2
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 5.0e-80 302.0 253 62.5
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 8.5e-80 301.2 282 55.0
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.1e-79 300.8 302 53.3
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 2.7e-78 296.2 243 64.2
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.0e-76 290.0 268 61.2
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 3.7e-75 285.8 238 62.2
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 6.3e-75 285.0 235 62.1
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.1e-74 284.3 285 55.4
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.1e-74 284.3 279 53.8
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.0e-74 281.6 280 56.1
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 2.3e-69 266.5 256 57.0
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 2.2e-67 260.0 244 56.6
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 4.8e-67 258.8 279 50.2
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.1e-66 255.8 280 53.6
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 9.1e-66 254.6 286 48.3
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 2.0e-65 253.4 290 49.3
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 2.5e-63 246.5 277 49.1
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 7.2e-63 245.0 302 46.7
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-62 243.8 280 51.8
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 4.1e-58 229.2 230 52.6
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 1.6e-57 227.3 274 48.5
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 7.7e-57 224.9 299 47.8
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.8e-53 213.8 202 55.9
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 4.0e-53 212.6 202 58.4
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.7e-51 207.2 201 56.2
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.8e-51 206.5 201 56.7
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.4e-50 204.1 203 55.7
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 5.4e-50 202.2 201 55.7
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 7.7e-49 198.4 168 63.7
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 7.7e-49 198.4 168 63.7
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.1e-47 194.5 168 61.9
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 1.1e-47 194.5 242 45.9
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 1.9e-47 193.7 116 80.2
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.2e-46 191.0 168 61.3
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 2.8e-46 189.9 287 37.6
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.7e-44 182.2 176 54.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 3.7e-43 179.5 285 37.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.9e-43 179.1 208 49.0
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 8.3e-43 178.3 140 61.4
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 5.9e-41 172.2 140 58.6
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.7e-40 170.6 135 64.4
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 2.5e-39 166.8 168 56.5
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.6e-39 165.6 204 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 2.0e-36 157.1 228 41.2
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.3e-35 154.5 95 78.9
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 6.0e-33 145.6 184 47.8
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 7.8e-33 145.2 209 45.5
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 8.6e-32 141.7 70 88.6
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 8.3e-27 125.2 218 40.4
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.8e-21 107.5 102 58.8
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 7.1e-18 95.5 82 59.8
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 4.3e-15 86.3 93 52.7
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 9.6e-15 85.1 75 60.0
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 3.6e-14 83.2 50 76.0
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 2.7e-09 67.0 60 51.7
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 6.0e-09 65.9 99 37.4
TWI09G1601 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 7.3e-07 58.9 121 31.4
Psat2g015120 Pisum sativum HOM05D000088 ORTHO05D003056 6.2e-06 55.8 85 35.3
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 6.2e-06 55.8 27 88.9
Thecc.06G161000 Theobroma cacao HOM05D000088 ORTHO05D003056 6.2e-06 55.8 73 35.6


User provided reference genes

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