Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G027001 Populus trichocarpa HOM05D005078 ORTHO05D023768 6.7e-99 364.0 182 100.0
Sabra06G0199100 Salix brachista HOM05D005078 ORTHO05D007574 2.1e-12 76.6 52 73.1
Potri.006G254900 Populus trichocarpa HOM05D005078 ORTHO05D007574 4.0e-11 72.4 52 69.2
Atru.chr6.903 Acer truncatum HOM05D005078 ORTHO05D007574 2.0e-10 70.1 53 62.3
TAR628G0147 Trochodendron aralioides HOM05D005078 ORTHO05D007574 4.5e-10 68.9 54 63.0
CiPaw.06G150900 Carya illinoinensis HOM05D005078 ORTHO05D007574 9.9e-10 67.8 57 57.9
ClCG09G013630 Citrullus lanatus HOM05D005078 ORTHO05D007574 1.3e-09 67.4 53 60.4
CsaV3_7G006040 Cucumis sativus L. HOM05D005078 ORTHO05D007574 1.3e-09 67.4 53 60.4
Dinv19325 Davidia involucrata HOM05D005078 ORTHO05D007574 1.7e-09 67.0 53 58.5
Ciclev10000359m.g Citrus clementina HOM05D005078 ORTHO05D007574 2.9e-09 66.2 52 61.5
MELO3C018688.2 Cucumis melo HOM05D005078 ORTHO05D007574 4.9e-09 65.5 53 58.5
Dinv24223 Davidia involucrata HOM05D005078 ORTHO05D007574 6.4e-09 65.1 53 56.6
CSS0009626 Camellia sinensis var. sinensis HOM05D005078 ORTHO05D007574 8.4e-09 64.7 53 56.6
CSS0037915 Camellia sinensis var. sinensis HOM05D005078 ORTHO05D007574 8.4e-09 64.7 53 56.6
Cfa005576 Carpinus fangiana HOM05D005078 ORTHO05D007574 1.1e-08 64.3 53 58.5
Haze_10783 Corylus avellana HOM05D005078 ORTHO05D007574 1.1e-08 64.3 53 58.5
Thecc.02G143700 Theobroma cacao HOM05D005078 ORTHO05D007574 1.1e-08 64.3 53 60.4
COL.COLO4_20871 Corchorus olitorius HOM05D005078 ORTHO05D007574 1.4e-08 63.9 53 62.3
Manes.10G130600 Manihot esculenta HOM05D005078 ORTHO05D007574 1.4e-08 63.9 50 64.0
QL11p019326 Quercus lobata HOM05D005078 ORTHO05D007574 2.4e-08 63.2 53 58.5
CANSAT56G3597 Cannabis sativa HOM05D005078 ORTHO05D007574 3.2e-08 62.8 49 59.2
Cc02_g21860 Coffea canephora HOM05D005078 ORTHO05D007574 3.2e-08 62.8 52 59.6
Duzib052G0049 Durio zibethinus HOM05D005078 ORTHO05D007574 3.2e-08 62.8 53 56.6
QL08p030853 Quercus lobata HOM05D005078 ORTHO05D007574 3.2e-08 62.8 53 58.5
QL08p030872 Quercus lobata HOM05D005078 ORTHO05D007574 3.2e-08 62.8 53 58.5
Lj4g0026324 Lotus japonicus HOM05D005078 ORTHO05D007574 1.2e-07 60.8 59 52.5
Sed0005211 Sechium edule HOM05D005078 ORTHO05D007574 2.1e-07 60.1 54 57.4
Glyma.08G075100 Glycine max HOM05D005078 ORTHO05D007574 2.7e-07 59.7 59 50.8
Prupe.1G560000 Prunus persica HOM05D005078 ORTHO05D007574 2.7e-07 59.7 53 58.5
Sc14g0003200 Simmondsia chinensis HOM05D005078 ORTHO05D007574 2.7e-07 59.7 53 54.7
arahy.Tifrunner.gnm1.ann1.BEU0Z4 Arachis hypogaea HOM05D005078 ORTHO05D007574 3.5e-07 59.3 48 58.3
arahy.Tifrunner.gnm1.ann1.T96GLE Arachis hypogaea HOM05D005078 ORTHO05D007574 3.5e-07 59.3 48 58.3
Lj9A318G98 Lonicera japonica HOM05D005078 ORTHO05D007574 3.5e-07 59.3 50 58.0
Sed0011242 Sechium edule HOM05D005078 ORTHO05D007574 3.5e-07 59.3 53 52.8
Glyma.05G120400 Glycine max HOM05D005078 ORTHO05D007574 4.6e-07 58.9 59 50.8
arahy.Tifrunner.gnm1.ann1.SMG2WU Arachis hypogaea HOM05D005078 ORTHO05D023768 6.0e-07 58.5 44 65.9
Phvul.002G206400 Phaseolus vulgaris HOM05D005078 ORTHO05D007574 7.9e-07 58.2 59 49.2
Rhsim05G0111000 Rhododendron simsii HOM05D005078 ORTHO05D007574 7.9e-07 58.2 53 54.7
Lalb_Chr07g0189431 Lupinus albus HOM05D005078 ORTHO05D007574 1.0e-06 57.8 52 53.8
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 1.3e-06 57.4 52 51.9
VMungo0251G0911 Vigna mungo HOM05D005078 ORTHO05D007574 1.8e-06 57.0 52 50.0
vmacro19912 Vaccinium macrocarpon HOM05D005078 ORTHO05D007574 3.0e-06 56.2 53 54.7
Nitab4.5_0010375g0010 Nicotiana tabacum HOM05D005078 ORTHO05D007574 3.9e-06 55.8 51 52.9
Oeu037204.1 Olea europaea HOM05D005078 ORTHO05D007574 3.9e-06 55.8 46 56.5
Peaxi162Scf00003g03733 Petunia axillaris HOM05D005078 ORTHO05D007574 3.9e-06 55.8 52 51.9
PGR142G3913 Punica granatum HOM05D005078 ORTHO05D007574 3.9e-06 55.8 62 50.0
TWI59G0763 Tripterygium wilfordii HOM05D005078 ORTHO05D007574 3.9e-06 55.8 52 53.8
Cpa.g.sc63.26 Carica papaya HOM05D005078 ORTHO05D007574 6.7e-06 55.1 53 50.9
Solyc10g047050.2 Solanum lycopersicum HOM05D005078 ORTHO05D007574 6.7e-06 55.1 51 52.9
Sopen10g017000 Solanum pennellii HOM05D005078 ORTHO05D007574 6.7e-06 55.1 51 52.9
PGSC0003DMG400005500 Solanum tuberosum HOM05D005078 ORTHO05D007574 6.7e-06 55.1 51 52.9
Actinidia04428 Actinidia chinensis HOM05D005078 ORTHO05D007574 8.7e-06 54.7 53 49.1


User provided reference genes

Program Settings