Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 8.1e-171 603.6 292 100.0
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.1e-159 563.9 292 93.8
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.6e-153 545.4 292 90.4
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.2e-152 542.3 290 89.0
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 2.2e-152 542.3 292 88.4
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.9e-152 541.2 292 89.4
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.9e-152 541.2 292 89.4
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.9e-152 541.2 273 96.0
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.1e-151 540.0 292 87.7
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.1e-151 540.0 292 89.4
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.1e-151 540.0 292 88.7
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 2.4e-151 538.9 292 89.4
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.4e-151 538.9 292 89.0
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 5.4e-151 537.7 291 88.7
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 7.1e-151 537.3 292 88.0
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.6e-150 536.2 292 88.7
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 2.1e-150 535.8 292 87.7
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.1e-150 535.8 292 88.0
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 4.6e-150 534.6 292 88.0
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.0e-150 534.3 292 87.3
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 6.0e-150 534.3 292 88.4
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 6.0e-150 534.3 292 88.4
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 7.9e-150 533.9 292 87.0
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.9e-149 531.6 292 87.7
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 3.9e-149 531.6 292 88.0
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 6.6e-149 530.8 292 87.0
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.1e-148 530.0 292 86.0
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 4.3e-148 528.1 288 86.8
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 86.6
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 7.4e-148 527.3 288 85.8
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 7.4e-148 527.3 292 85.6
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 7.4e-148 527.3 288 86.5
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 1.6e-147 526.2 288 86.1
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.1e-147 525.8 289 86.9
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 4.8e-147 524.6 288 85.1
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 4.8e-147 524.6 292 86.3
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 6.2e-147 524.2 294 86.7
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 6.2e-147 524.2 290 85.9
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.4e-146 523.1 290 86.9
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 86.0
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 85.3
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 3.4e-145 518.5 292 84.2
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 3.4e-145 518.5 288 85.1
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 4.5e-145 518.1 290 84.1
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 4.5e-145 518.1 288 84.0
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.3e-144 516.5 292 83.9
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 2.2e-144 515.8 290 84.8
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.9e-144 515.4 292 86.3
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 3.8e-144 515.0 288 83.0
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 3.8e-144 515.0 290 83.8
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 4.9e-144 514.6 292 82.5
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 4.9e-144 514.6 321 78.2
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 83.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.1e-143 513.5 287 85.0
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.1e-143 513.5 287 85.0
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.1e-143 513.5 290 83.4
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 2.4e-143 512.3 280 86.1
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 83.6
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 5.5e-143 511.1 292 85.3
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.6e-142 509.6 293 83.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.7e-142 508.8 289 84.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.7e-142 508.8 291 81.4
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 3.5e-142 508.4 292 81.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 3.5e-142 508.4 292 81.5
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.3e-141 506.5 287 83.6
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.8e-141 506.1 292 82.9
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.8e-141 506.1 292 82.9
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 2.3e-141 505.8 292 81.2
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.9e-141 505.0 289 83.7
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 80.8
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 82.5
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 81.8
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 6.7e-141 504.2 292 80.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 80.5
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.9e-140 502.7 292 80.8
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 2.5e-140 502.3 292 80.1
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 2.5e-140 502.3 290 81.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.3e-140 501.9 290 81.4
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.3e-140 501.9 290 83.1
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 1.3e-139 500.0 292 82.2
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 81.8
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 6.2e-139 497.7 292 79.8
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 6.2e-139 497.7 292 80.1
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 6.2e-139 497.7 274 88.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.1e-138 496.9 292 80.1
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.1e-138 496.9 290 81.0
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.4e-138 495.7 278 86.3
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 6.9e-138 494.2 291 80.4
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.0e-137 492.7 290 80.3
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.0e-137 492.7 287 82.9
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 78.8
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 78.8
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 4.5e-137 491.5 292 78.8
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 4.5e-137 491.5 292 78.8
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 4.5e-137 491.5 289 80.3
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.5e-137 491.5 292 81.8
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 2.2e-136 489.2 287 79.4
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 4.9e-136 488.0 292 80.5
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.4e-135 486.5 289 81.3
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.6e-134 483.0 272 85.3
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.0e-133 480.3 292 81.5
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 5.1e-133 478.0 288 80.2
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.8e-131 472.2 254 87.0
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.8e-130 469.5 272 82.4
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.4e-130 469.2 289 76.1
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 6.9e-130 467.6 313 75.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.5e-129 466.5 294 74.1
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.3e-128 463.4 292 78.8
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 9.7e-124 447.2 292 76.0
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 4.1e-122 441.8 309 69.6
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.5e-121 439.9 288 71.2
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 5.9e-121 438.0 271 79.3
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.0e-120 437.2 287 71.4
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 8.2e-115 417.5 281 68.3
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 3.4e-113 412.1 273 70.0
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.2e-111 405.6 267 70.8
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 2.6e-108 396.0 281 64.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 8.8e-101 370.9 223 78.9
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 5.9e-97 358.2 321 61.1
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.2e-89 334.0 173 92.5
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 6.1e-86 321.6 289 54.0
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.6e-84 316.2 190 80.5
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.6e-84 316.2 183 83.6
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 1.6e-81 307.0 186 80.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.3e-79 298.9 297 53.5
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.8e-78 296.2 294 52.4
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 5.2e-77 292.0 188 72.3
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.9e-71 273.5 293 46.4
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 7.1e-58 228.4 164 68.9
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.0e-57 225.3 310 43.9
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.6e-56 221.9 224 56.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.8e-54 216.5 224 55.4
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 2.5e-47 193.4 106 84.9
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.8e-44 182.2 101 88.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.9e-44 181.4 102 86.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.6e-41 174.1 96 88.5
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.1e-29 134.8 76 85.5
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.9e-24 116.3 166 42.8
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-21 108.2 96 63.5
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 3.6e-09 66.6 49 63.3
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 6.1e-09 65.9 40 85.0


User provided reference genes

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