Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.3e-309 1064.7 517 100.0
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 8.9e-290 999.6 517 93.2
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.3e-240 836.3 501 79.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 2.9e-240 835.1 504 78.2
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 4.7e-238 827.8 506 78.3
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.8e-237 825.9 496 78.6
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.8e-237 825.9 515 76.3
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 3.9e-237 824.7 513 76.4
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 8.8e-237 823.5 513 76.2
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.6e-236 822.0 498 77.5
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 1.3e-235 819.7 514 76.8
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 2.2e-235 818.9 500 77.8
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.2e-233 813.1 499 77.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 3.5e-233 811.6 499 75.4
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 2.2e-232 808.9 505 76.2
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 4.2e-231 804.7 512 75.0
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 1.6e-230 802.7 503 75.1
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 2.1e-230 802.4 498 74.9
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 6.1e-230 800.8 516 73.3
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.4e-229 799.7 516 73.1
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 3.0e-229 798.5 506 74.5
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.3e-228 795.0 518 73.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.8e-227 792.0 510 75.1
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 2.8e-227 792.0 503 74.2
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.1e-226 790.0 509 74.1
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 2.4e-226 788.9 503 74.0
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 4.1e-226 788.1 506 73.7
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 9.1e-226 786.9 496 75.0
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.6e-225 786.2 489 74.6
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.0e-225 785.8 497 74.8
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 4.5e-225 784.6 505 73.5
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 7.7e-225 783.9 499 73.5
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.7e-224 782.7 511 72.2
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 2.2e-224 782.3 499 72.9
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.9e-224 781.9 512 73.4
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.8e-224 781.6 511 72.2
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 6.5e-224 780.8 503 74.8
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 1.1e-223 780.0 510 73.5
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.1e-223 780.0 504 74.0
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.5e-223 779.6 511 72.2
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.9e-223 779.2 500 73.6
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.9e-223 779.2 509 73.1
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 7.2e-223 777.3 512 73.2
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.6e-222 776.2 502 73.3
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.7e-222 775.4 504 72.8
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 5.2e-221 771.2 498 73.5
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 6.8e-221 770.8 518 72.0
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.2e-220 770.0 491 73.3
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-220 770.0 502 72.7
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.5e-220 769.6 546 67.8
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 7.5e-220 767.3 516 69.8
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 9.8e-220 766.9 506 72.5
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 6.3e-219 764.2 499 71.7
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.4e-218 763.1 509 71.3
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.1e-218 761.9 478 75.3
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 3.1e-218 761.9 504 70.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.2e-217 760.0 468 76.9
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.6e-217 759.6 519 70.3
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 1.6e-217 759.6 514 71.6
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 1.6e-217 759.6 486 72.6
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 4.5e-217 758.1 512 70.9
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.2e-216 755.7 496 71.4
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 2.9e-216 755.4 503 70.6
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.5e-215 753.1 510 71.2
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 5.5e-215 751.1 484 72.3
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 5.5e-215 751.1 474 74.9
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.0e-213 746.9 510 70.8
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 2.0e-212 742.7 518 68.1
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 2.6e-212 742.3 456 76.1
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 3.4e-212 741.9 504 72.0
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 1.8e-210 736.1 518 69.3
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.7e-209 732.3 518 67.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.7e-208 729.6 483 71.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.6e-208 727.6 454 74.7
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 8.6e-208 727.2 502 68.9
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.9e-207 726.1 477 70.4
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 2.5e-207 725.7 500 69.6
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 7.3e-207 724.2 488 68.9
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.2e-206 723.4 503 68.8
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.1e-206 721.1 498 69.1
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 6.1e-206 721.1 498 69.3
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.1e-206 721.1 498 69.1
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 3.0e-205 718.8 492 69.3
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 5.2e-205 718.0 452 75.9
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 3.4e-204 715.3 488 69.1
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 5.7e-204 714.5 491 69.0
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 4.1e-202 708.4 492 68.3
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 5.4e-202 708.0 492 68.5
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.0e-201 706.1 496 67.7
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.3e-199 698.7 510 67.6
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.1e-198 696.0 550 62.9
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 4.0e-197 691.8 514 64.6
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 4.4e-196 688.3 491 65.6
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.3e-189 666.0 485 66.6
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 3.1e-181 639.0 500 63.2
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 6.4e-171 604.7 506 57.7
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 3.5e-161 572.4 382 70.2
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 7.9e-153 544.7 374 68.7
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 3.9e-152 542.3 339 76.1
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 7.1e-146 521.5 351 70.4
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 8.2e-134 481.5 356 63.8
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.5e-124 450.7 495 50.7
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.2e-120 435.6 303 67.7
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.8e-118 429.9 312 66.0
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 2.4e-93 347.1 230 65.7
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 8.3e-86 322.0 219 63.9
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-74 284.6 177 76.3
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 9.5e-74 282.0 183 71.0
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.3e-59 235.0 142 75.4
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 4.7e-57 226.5 148 65.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 7.7e-23 112.8 104 58.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.1e-16 90.9 52 75.0
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 6.7e-11 73.2 78 47.4
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 7.4e-10 69.7 82 45.1


User provided reference genes

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