Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.018G007500 Populus trichocarpa HOM05D027090 ORTHO05D011079 2.1e-41 171.8 78 100.0
Potri.018G007701 Populus trichocarpa HOM05D027090 ORTHO05D011079 2.1e-41 171.8 78 100.0
Potri.018G007800 Populus trichocarpa HOM05D027090 ORTHO05D011079 3.6e-33 144.4 71 90.1
Potri.018G007600 Populus trichocarpa HOM05D027090 ORTHO05D011079 8.8e-32 139.8 71 88.7
Sabra18G0014900 Salix brachista HOM05D002483 ORTHO05D003728 5.2e-16 87.4 49 75.5
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 9.5e-10 66.6 74 50.0
Atru.chr10.1415 Acer truncatum HOM05D009824 ORTHO05D012913 2.3e-08 62.0 74 45.9
Gohir.D11G253300 Gossypium hirsutum HOM05D009596 ORTHO05D011079 3.1e-08 61.6 74 39.2
Gohir.D11G253400 Gossypium hirsutum HOM05D009596 ORTHO05D011079 3.1e-08 61.6 74 39.2
Gorai.007G272100 Gossypium raimondii HOM05D009596 ORTHO05D011079 3.1e-08 61.6 74 39.2
Gorai.007G272200 Gossypium raimondii HOM05D009596 ORTHO05D011079 3.1e-08 61.6 74 39.2
TPR.G6486 Trifolium pratense HOM05D009824 ORTHO05D012089 1.2e-07 59.7 68 47.1
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.5e-07 59.3 74 44.6
AT2G32835 Arabidopsis thaliana HOM05D010069 ORTHO05D011961 2.0e-07 58.9 58 51.7
AL2G17150 Arabidopsis lyrata HOM05D010069 ORTHO05D011961 5.8e-07 57.4 58 44.8
MELO3C023467.2 Cucumis melo HOM05D019289 ORTHO05D011079 5.8e-07 57.4 70 41.4
Gohir.A11G241350 Gossypium hirsutum HOM05D009596 ORTHO05D011079 5.8e-07 57.4 74 35.1
Thhalv10012096m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.3e-06 56.2 72 38.9
Thhalv10024045m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.3e-06 56.2 72 38.9
Atru.chr6.2438 Acer truncatum HOM05D009824 ORTHO05D026248 1.7e-06 55.8 76 42.1
Thhalv10023902m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.7e-06 55.8 74 43.2
AL4G28300 Arabidopsis lyrata HOM05D010069 ORTHO05D011961 2.2e-06 55.5 58 46.6
CsaV3_3G023270 Cucumis sativus L. HOM05D009824 ORTHO05D012089 2.2e-06 55.5 76 39.5
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 2.9e-06 55.1 72 43.1
Sabra13G0115000 Salix brachista HOM05D009824 ORTHO05D012089 3.7e-06 54.7 73 42.5
ClCG03G017300 Citrullus lanatus HOM05D009824 ORTHO05D010344 6.4e-06 53.9 46 54.3


User provided reference genes

Program Settings