Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 5.8e-39 163.7 79 100.0
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 7.1e-29 130.2 99 71.7
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.3e-27 125.2 100 70.0
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.5e-26 122.5 99 66.7
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 8.1e-25 116.7 83 72.3
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 8.1e-25 116.7 99 65.7
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.1e-24 116.3 99 62.6
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.8e-24 115.5 98 61.2
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 6.9e-24 113.6 99 62.6
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 6.9e-24 113.6 99 62.6
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.2e-23 112.8 99 63.6
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.0e-23 112.1 99 60.6
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.6e-23 111.7 98 64.3
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 3.4e-23 111.3 88 67.0
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 3.4e-23 111.3 88 67.0
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 5.8e-23 110.5 88 67.0
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.3e-22 109.4 99 58.6
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.7e-22 109.0 90 64.4
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.7e-22 109.0 98 58.2
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.7e-22 109.0 99 59.6
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.7e-22 109.0 99 62.6
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.2e-22 108.6 93 61.3
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 3.8e-22 107.8 99 61.6
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 4.9e-22 107.5 99 61.6
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 4.9e-22 107.5 100 59.0
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 6.4e-22 107.1 100 58.0
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 6.4e-22 107.1 100 58.0
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 8.4e-22 106.7 99 61.6
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 8.4e-22 106.7 90 62.2
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 8.4e-22 106.7 90 62.2
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 8.4e-22 106.7 89 61.8
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.1e-21 106.3 99 62.6
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 2.4e-21 105.1 98 56.1
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 2.4e-21 105.1 88 64.8
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 2.4e-21 105.1 99 59.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 3.2e-21 104.8 96 57.3
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 4.2e-21 104.4 99 59.6
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.2e-21 104.4 99 59.6
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.2e-21 104.4 99 59.6
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.2e-21 104.4 99 59.6
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 5.4e-21 104.0 92 58.7
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 7.1e-21 103.6 59 83.1
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 7.1e-21 103.6 100 58.0
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 7.1e-21 103.6 102 58.8
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.2e-20 102.8 84 65.5
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.2e-20 102.8 98 59.2
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.6e-20 102.4 90 61.1
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.6e-20 102.4 99 58.6
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 3.5e-20 101.3 99 58.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 3.5e-20 101.3 99 58.6
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 3.5e-20 101.3 99 56.6
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 3.5e-20 101.3 90 61.1
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 4.6e-20 100.9 99 57.6
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 4.6e-20 100.9 99 57.6
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 4.6e-20 100.9 90 55.6
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 6.0e-20 100.5 90 60.0
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.0e-19 99.8 98 57.1
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.0e-19 99.8 90 60.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 1.3e-19 99.4 95 55.8
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.3e-19 99.4 91 59.3
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.3e-19 99.4 91 59.3
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.7e-19 99.0 98 55.1
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.7e-19 99.0 92 58.7
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.7e-19 99.0 90 58.9
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 2.3e-19 98.6 91 61.5
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 3.0e-19 98.2 99 56.6
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 3.9e-19 97.8 100 55.0
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 5.1e-19 97.4 94 57.4
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 6.6e-19 97.1 95 56.8
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 6.6e-19 97.1 97 53.6
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 8.7e-19 96.7 94 53.2
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.1e-18 96.3 99 53.5
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.1e-18 96.3 97 55.7
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.1e-18 96.3 99 52.5
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.1e-18 96.3 99 52.5
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.5e-18 95.9 99 52.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.5e-18 95.9 101 54.5
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.5e-18 95.9 84 61.9
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 3.3e-18 94.7 99 51.5
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 4.3e-18 94.4 94 58.5
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 7.3e-18 93.6 79 62.0
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 7.3e-18 93.6 78 61.5
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 7.3e-18 93.6 95 56.8
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 9.6e-18 93.2 97 53.6
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 9.6e-18 93.2 97 53.6
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 9.6e-18 93.2 87 55.2
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.3e-17 92.8 87 54.0
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 2.1e-17 92.0 101 52.5
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 3.6e-17 91.3 96 50.0
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 4.8e-17 90.9 88 54.5
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 8.1e-17 90.1 81 59.3
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.4e-16 89.4 78 60.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.4e-16 89.4 89 53.9
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 1.8e-16 89.0 87 54.0
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 3.1e-16 88.2 79 58.2
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 6.9e-16 87.0 79 58.2
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 9.0e-16 86.7 79 60.8
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 9.0e-16 86.7 79 57.0
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.2e-15 86.3 99 50.5
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.2e-15 86.3 99 45.5
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 2.9e-14 81.6 90 50.0
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.1e-13 79.7 87 49.4
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 1.1e-13 79.7 66 63.6
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 7.1e-13 77.0 87 47.1
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 3.5e-12 74.7 95 46.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 3.5e-12 74.7 63 65.1
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 4.6e-12 74.3 82 52.4
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 2.3e-11 72.0 102 40.2
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.5e-10 69.3 80 45.0
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 2.5e-10 68.6 78 46.2
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 3.3e-10 68.2 77 54.5
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 3.7e-09 64.7 94 41.5
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 4.8e-09 64.3 88 40.9
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.8e-09 64.3 88 40.9
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.8e-09 64.3 91 40.7
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.4e-08 62.0 91 42.9
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.0e-08 61.2 90 43.3


User provided reference genes

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