Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G151740 Populus trichocarpa HOM05D004529 ORTHO05D005884 2.5e-127 458.8 231 100.0
Potri.017G152601 Populus trichocarpa HOM05D004529 ORTHO05D005884 4.3e-26 122.5 60 96.7
Sabra17G0125600 Salix brachista HOM05D004529 ORTHO05D005884 9.0e-24 114.8 60 90.0
Potri.004G068700 Populus trichocarpa HOM05D004529 ORTHO05D005884 5.5e-21 105.5 60 80.0
Sabra04G0046400 Salix brachista HOM05D004529 ORTHO05D005884 2.1e-20 103.6 60 78.3
Haze_18337 Corylus avellana HOM05D004529 ORTHO05D005884 2.4e-16 90.1 61 73.8
Duzib177G0816 Durio zibethinus HOM05D004529 ORTHO05D005884 1.2e-15 87.8 61 72.1
Psat0s1805g0040 Pisum sativum HOM05D004529 ORTHO05D005884 3.4e-15 86.3 60 70.0
COL.COLO4_08720 Corchorus olitorius HOM05D004529 ORTHO05D005884 1.3e-14 84.3 61 68.9
QL10p034152 Quercus lobata HOM05D004529 ORTHO05D005884 1.3e-14 84.3 61 72.1
Thecc.05G197800 Theobroma cacao HOM05D004529 ORTHO05D005884 1.3e-14 84.3 61 70.5
Ciclev10018551m.g Citrus clementina HOM05D004529 ORTHO05D005884 1.7e-14 84.0 61 65.6
Gohir.D13G093200 Gossypium hirsutum HOM05D004529 ORTHO05D005884 2.9e-14 83.2 60 68.3
TWI81G0141 Tripterygium wilfordii HOM05D004529 ORTHO05D005884 2.9e-14 83.2 61 67.2
Atru.chr9.71 Acer truncatum HOM05D004529 ORTHO05D005884 8.4e-14 81.6 61 68.9
Glyma.16G212800 Glycine max HOM05D004529 ORTHO05D005884 8.4e-14 81.6 60 68.3
Lalb_Chr14g0370211 Lupinus albus HOM05D004529 ORTHO05D005884 8.4e-14 81.6 60 65.0
Dinv06405 Davidia involucrata HOM05D004529 ORTHO05D005884 1.1e-13 81.3 61 67.2
Lj2g0011080 Lotus japonicus HOM05D004529 ORTHO05D005884 1.1e-13 81.3 60 68.3
Prupe.5G240600 Prunus persica HOM05D004529 ORTHO05D005884 1.1e-13 81.3 59 67.8
Actinidia34683 Actinidia chinensis HOM05D004529 ORTHO05D005884 1.9e-13 80.5 61 65.6
Glyma.09G164300 Glycine max HOM05D004529 ORTHO05D005884 1.9e-13 80.5 60 66.7
Lalb_Chr22g0354001 Lupinus albus HOM05D004529 ORTHO05D005884 1.9e-13 80.5 62 64.5
TPR.G19877 Trifolium pratense HOM05D004529 ORTHO05D005884 2.5e-13 80.1 60 68.3
arahy.Tifrunner.gnm1.ann1.FEKM9F Arachis hypogaea HOM05D004529 ORTHO05D005884 3.2e-13 79.7 60 65.0
Medtr6g077930 Medicago truncatula HOM05D004529 ORTHO05D005884 4.2e-13 79.3 60 66.7
Dinv11730 Davidia involucrata HOM05D004529 ORTHO05D005884 5.5e-13 79.0 61 63.9
Gohir.A13G153800 Gossypium hirsutum HOM05D004529 ORTHO05D005884 1.2e-12 77.8 61 63.9
Lalb_Chr24g0398601 Lupinus albus HOM05D004529 ORTHO05D005884 1.6e-12 77.4 62 66.1
arahy.Tifrunner.gnm1.ann1.1UV8VN Arachis hypogaea HOM05D004529 ORTHO05D005884 2.1e-12 77.0 60 63.3
CANSAT64G3027 Cannabis sativa HOM05D004529 ORTHO05D005884 3.5e-12 76.3 61 62.3
Duzib128G0682 Durio zibethinus HOM05D004529 ORTHO05D005884 4.6e-12 75.9 60 65.0
RcHm_v2.0_Chr7g0177561 Rosa chinensis HOM05D004529 ORTHO05D005884 6.0e-12 75.5 62 62.9
DCAR_011683 Daucus carota HOM05D004529 ORTHO05D005884 7.9e-12 75.1 60 60.0
Gohir.D13G158400 Gossypium hirsutum HOM05D004529 ORTHO05D005884 7.9e-12 75.1 61 60.7
Gorai.013G179100 Gossypium raimondii HOM05D004529 ORTHO05D005884 7.9e-12 75.1 61 60.7
Phvul.004G138850 Phaseolus vulgaris HOM05D004529 ORTHO05D005884 1.0e-11 74.7 60 58.3
Ca_27163_v3 Cicer arietinum L. HOM05D004529 ORTHO05D005884 1.3e-11 74.3 60 63.3
TAR629G0199 Trochodendron aralioides HOM05D004529 ORTHO05D005884 1.3e-11 74.3 60 61.7
MD06G1235900 Malus domestica HOM05D004529 ORTHO05D005884 1.8e-11 73.9 62 59.7
MD14G1242900 Malus domestica HOM05D004529 ORTHO05D005884 1.8e-11 73.9 62 61.3
FAN04G1556 Fragaria x ananassa HOM05D004529 ORTHO05D005884 3.0e-11 73.2 60 58.3
FAN08G2030 Fragaria x ananassa HOM05D004529 ORTHO05D005884 3.9e-11 72.8 60 58.3
TAR629G2105 Trochodendron aralioides HOM05D004529 ORTHO05D005884 3.9e-11 72.8 60 60.0
FAN13G2071 Fragaria x ananassa HOM05D004529 ORTHO05D005884 6.7e-11 72.0 62 56.5
RcHm_v2.0_Chr7g0177041 Rosa chinensis HOM05D004529 ORTHO05D005884 1.1e-10 71.2 59 59.3
FvH4_5g18040 Fragaria vesca HOM05D004529 ORTHO05D005884 1.9e-10 70.5 60 56.7
FAN18G3802 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.9e-10 70.5 60 56.7
Rhsim08G0124700 Rhododendron simsii HOM05D004529 ORTHO05D005884 1.9e-10 70.5 62 64.5
VMungo0464G0747 Vigna mungo HOM05D004529 ORTHO05D005884 1.9e-10 70.5 60 56.7
VMungo0464G1978 Vigna mungo HOM05D004529 ORTHO05D005884 1.9e-10 70.5 60 56.7
CsaV3_1G007540 Cucumis sativus L. HOM05D004529 ORTHO05D005884 3.3e-10 69.7 60 58.3
MBI03_g26653_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 4.3e-10 69.3 61 57.4
vmacro17741 Vaccinium macrocarpon HOM05D004529 ORTHO05D005884 7.4e-10 68.6 62 61.3
FvH4_5g18430 Fragaria vesca HOM05D004529 ORTHO05D005884 9.7e-10 68.2 62 53.2
FAN18G1654 Fragaria x ananassa HOM05D004529 ORTHO05D005884 9.7e-10 68.2 62 53.2
MELO3C035753.2 Cucumis melo HOM05D004529 ORTHO05D005884 2.2e-09 67.0 66 54.5
FAN08G1550 Fragaria x ananassa HOM05D004529 ORTHO05D005884 2.2e-09 67.0 64 54.7
Gohir.A13G089790 Gossypium hirsutum HOM05D004529 ORTHO05D005884 2.2e-09 67.0 54 64.8
ATR0618G236 Amborella trichopoda HOM05D004529 ORTHO05D005884 4.8e-09 65.9 60 60.0
Nitab4.5_0000033g0370 Nicotiana tabacum HOM05D004529 ORTHO05D005884 6.3e-09 65.5 61 47.5
MBI06_g11152_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 1.1e-08 64.7 61 54.1
GSVIVG01024252001 Vitis vinifera HOM05D004529 ORTHO05D005884 1.4e-08 64.3 59 54.2
Peaxi162Scf00643g00541 Petunia axillaris HOM05D004529 ORTHO05D005884 1.8e-08 63.9 61 44.3
CAN.G65.75 Capsicum annuum HOM05D004529 ORTHO05D005884 5.3e-08 62.4 69 44.9
Nitab4.5_0000782g0040 Nicotiana tabacum HOM05D004529 ORTHO05D005884 5.3e-08 62.4 61 45.9
PGR083G0180 Punica granatum HOM05D004529 ORTHO05D005884 5.3e-08 62.4 62 51.6
CSS0033935 Camellia sinensis var. sinensis HOM05D004529 ORTHO05D005884 9.0e-08 61.6 53 62.3
CDE05G3012 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 9.0e-08 61.6 61 54.1
Eucgr.H00653 Eucalyptus grandis HOM05D004529 ORTHO05D005884 9.0e-08 61.6 61 50.8
ClCG01G014790 Citrullus lanatus HOM05D004529 ORTHO05D005884 1.2e-07 61.2 60 55.0
Lj5A167G40 Lonicera japonica HOM05D004529 ORTHO05D005884 1.2e-07 61.2 60 50.0
Nitab4.5_0003040g0050 Nicotiana tabacum HOM05D004529 ORTHO05D005884 1.5e-07 60.8 61 45.9
CDE08G0908 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 7.7e-07 58.5 61 52.5
Zm00001eb271850 Zea mays HOM05D004529 ORTHO05D005884 1.3e-06 57.8 60 46.7
CAN.G929.20 Capsicum annuum HOM05D004529 ORTHO05D005884 2.2e-06 57.0 61 45.9
Cfa014498 Carpinus fangiana HOM05D004529 ORTHO05D005884 2.2e-06 57.0 62 53.2
CDE04G1759 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 2.2e-06 57.0 61 50.8
Peaxi162Scf00171g00234 Petunia axillaris HOM05D004529 ORTHO05D005884 2.2e-06 57.0 61 42.6
GSVIVG01000446001 Vitis vinifera HOM05D004529 ORTHO05D005884 2.9e-06 56.6 61 47.5
PGSC0003DMG400010150 Solanum tuberosum HOM05D004529 ORTHO05D005884 5.0e-06 55.8 61 44.3
Haze_13045 Corylus avellana HOM05D004529 ORTHO05D005884 6.5e-06 55.5 62 51.6
Potri.013G149400 Populus trichocarpa HOM05D004529 ORTHO05D005884 6.5e-06 55.5 64 42.2


User provided reference genes

Program Settings