Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G149500 Populus trichocarpa HOM05D000063 ORTHO05D331673 6.5e-81 303.9 144 100.0
Potri.017G148266 Populus trichocarpa HOM05D000063 ORTHO05D018090 3.0e-25 119.0 138 53.6
Potri.004G070500 Populus trichocarpa HOM05D000063 ORTHO05D018090 1.9e-16 89.7 112 45.5
Sabra17G0014500 Salix brachista HOM05D000455 ORTHO05D018090 6.0e-10 68.2 140 32.9
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 8.7e-09 64.3 118 33.9
QL03p033801 Quercus lobata HOM05D000063 ORTHO05D001671 1.1e-08 63.9 150 33.3
TWI77G0918 Tripterygium wilfordii HOM05D000063 ORTHO05D001671 1.1e-08 63.9 142 33.8
Duzib248G0040 Durio zibethinus HOM05D000063 ORTHO05D001671 1.5e-08 63.5 141 31.9
Hma1.2p1_0330F.1_g127360 Hydrangea macrophylla HOM05D000063 ORTHO05D001671 2.5e-08 62.8 142 33.8
Lsat_1_v5_gn_8_44501 Lactuca sativa HOM05D000063 ORTHO05D001671 2.5e-08 62.8 152 32.2
Duzib212G0461 Durio zibethinus HOM05D000030 ORTHO05D010590 3.3e-08 62.4 102 41.2
Duzib251G0574 Durio zibethinus HOM05D000063 ORTHO05D001671 3.3e-08 62.4 141 31.9
Duzib268G1299 Durio zibethinus HOM05D000063 ORTHO05D001671 3.3e-08 62.4 149 31.5
Sabra07G0120100 Salix brachista HOM05D000455 ORTHO05D018090 3.3e-08 62.4 122 36.1
arahy.Tifrunner.gnm1.ann1.64CHNN Arachis hypogaea HOM05D000063 ORTHO05D001671 4.3e-08 62.0 150 31.3
arahy.Tifrunner.gnm1.ann1.DN4CQF Arachis hypogaea HOM05D000063 ORTHO05D001671 4.3e-08 62.0 150 31.3
Cpa.g.sc2.240 Carica papaya HOM05D000063 ORTHO05D001671 4.3e-08 62.0 142 33.8
CiPaw.04G046900 Carya illinoinensis HOM05D000063 ORTHO05D001671 4.3e-08 62.0 136 33.8
Atru.chr11.665 Acer truncatum HOM05D000063 ORTHO05D001671 5.6e-08 61.6 144 33.3
Potri.007G133000 Populus trichocarpa HOM05D000063 ORTHO05D018090 5.6e-08 61.6 119 33.6
Sed0005795 Sechium edule HOM05D000063 ORTHO05D001671 5.6e-08 61.6 141 32.6
CiPaw.05G194400 Carya illinoinensis HOM05D000063 ORTHO05D001671 7.4e-08 61.2 142 33.1
Duzib151G0422 Durio zibethinus HOM05D000030 ORTHO05D010590 7.4e-08 61.2 112 38.4
Sabra07G0120200 Salix brachista HOM05D000063 ORTHO05D018090 7.4e-08 61.2 122 32.0
Thecc.02G287200 Theobroma cacao HOM05D000063 ORTHO05D001671 7.4e-08 61.2 141 31.9
MD09G1264800 Malus domestica HOM05D000063 ORTHO05D001671 9.6e-08 60.8 146 33.6
TWI74G1139 Tripterygium wilfordii HOM05D000063 ORTHO05D001671 9.6e-08 60.8 140 33.6
Manes.15G130800 Manihot esculenta HOM05D000063 ORTHO05D001671 1.3e-07 60.5 142 32.4
Sabra07G0108300 Salix brachista HOM05D000455 ORTHO05D018090 1.3e-07 60.5 141 33.3
Ciclev10017466m.g Citrus clementina HOM05D000063 ORTHO05D001671 1.6e-07 60.1 150 29.3
Haze_10946 Corylus avellana HOM05D000063 ORTHO05D001671 1.6e-07 60.1 139 32.4
Haze_10947 Corylus avellana HOM05D000063 ORTHO05D001671 1.6e-07 60.1 139 32.4
Haze_14248 Corylus avellana HOM05D000063 ORTHO05D001671 1.6e-07 60.1 133 33.1
Sc10g0004750 Simmondsia chinensis HOM05D000063 ORTHO05D001671 1.6e-07 60.1 149 29.5
Actinidia36651 Actinidia chinensis HOM05D000063 ORTHO05D001671 2.1e-07 59.7 132 32.6
Cfa014976 Carpinus fangiana HOM05D000063 ORTHO05D001671 2.1e-07 59.7 142 32.4
AUR62014191 Chenopodium quinoa HOM05D000063 ORTHO05D001671 2.1e-07 59.7 141 32.6
DCAR_007311 Daucus carota HOM05D000063 ORTHO05D001671 2.1e-07 59.7 142 32.4
Potri.016G027800 Populus trichocarpa HOM05D000063 ORTHO05D018090 2.1e-07 59.7 137 32.1
Cfa007824 Carpinus fangiana HOM05D000063 ORTHO05D001671 2.8e-07 59.3 133 33.1
CiPaw.06G048100 Carya illinoinensis HOM05D000063 ORTHO05D001671 2.8e-07 59.3 140 33.6
Gorai.001G089400 Gossypium raimondii HOM05D000063 ORTHO05D001671 2.8e-07 59.3 137 34.3
Nitab4.5_0012189g0010 Nicotiana tabacum HOM05D000063 ORTHO05D001671 2.8e-07 59.3 142 30.3
Thecc.04G117200 Theobroma cacao HOM05D000063 ORTHO05D001671 2.8e-07 59.3 150 30.7
ClCG01G006310 Citrullus lanatus HOM05D000063 ORTHO05D001671 3.7e-07 58.9 141 33.3
COL.COLO4_13106 Corchorus olitorius HOM05D000063 ORTHO05D001671 3.7e-07 58.9 139 31.7
Dinv28039 Davidia involucrata HOM05D000063 ORTHO05D001671 3.7e-07 58.9 142 32.4
Gohir.D01G143500 Gossypium hirsutum HOM05D000063 ORTHO05D001671 3.7e-07 58.9 141 31.9
Gorai.002G177000 Gossypium raimondii HOM05D000063 ORTHO05D001671 3.7e-07 58.9 141 31.9
HanXRQChr12g0363901 Helianthus annuus HOM05D000063 ORTHO05D001671 3.7e-07 58.9 152 30.9
Lj3P867T15 Lonicera japonica HOM05D000063 ORTHO05D001671 3.7e-07 58.9 141 31.2
Lj6P743T12 Lonicera japonica HOM05D000063 ORTHO05D001671 3.7e-07 58.9 140 31.4
Nitab4.5_0005418g0080 Nicotiana tabacum HOM05D000063 ORTHO05D001671 3.7e-07 58.9 142 31.0
GSVIVG01030735001 Vitis vinifera HOM05D000063 ORTHO05D001671 3.7e-07 58.9 151 30.5
Ca_27285_v3 Cicer arietinum L. HOM05D000063 ORTHO05D001671 4.8e-07 58.5 148 31.8
Cc07_g13590 Coffea canephora HOM05D000063 ORTHO05D001671 4.8e-07 58.5 150 28.7
Duzib211G0543 Durio zibethinus HOM05D000063 ORTHO05D001671 4.8e-07 58.5 136 32.4
Gohir.D07G083800 Gossypium hirsutum HOM05D000063 ORTHO05D001671 4.8e-07 58.5 138 34.8
MD17G1260700 Malus domestica HOM05D000063 ORTHO05D001671 4.8e-07 58.5 136 33.1
Oeu009265.1 Olea europaea HOM05D000063 ORTHO05D001671 4.8e-07 58.5 150 29.3
Peaxi162Scf00159g00167 Petunia axillaris HOM05D000063 ORTHO05D001671 4.8e-07 58.5 141 29.8
Sabra16G0032100 Salix brachista HOM05D000030 ORTHO05D000009 4.8e-07 58.5 143 32.2
TWI74G0669 Tripterygium wilfordii HOM05D000063 ORTHO05D001671 4.8e-07 58.5 142 31.7
Ah.02g127820 Amaranthus hybridus HOM05D000063 ORTHO05D001671 6.2e-07 58.2 142 33.1
ATR0564G123 Amborella trichopoda HOM05D000063 ORTHO05D001671 6.2e-07 58.2 149 28.9
BcaB07g30733 Brassica carinata HOM05D000063 ORTHO05D001671 6.2e-07 58.2 143 31.5
MBI12_g33081_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D001671 6.2e-07 58.2 150 29.3
TPR.G9581 Trifolium pratense HOM05D000063 ORTHO05D001671 6.2e-07 58.2 148 31.1
ECA233G0674 Erigeron canadensis HOM05D000063 ORTHO05D001671 8.1e-07 57.8 151 31.1
Nn3g18285 Nelumbo nucifera HOM05D000063 ORTHO05D001671 8.1e-07 57.8 142 31.0
MSTRG.13602 Avicennia marina HOM05D000063 ORTHO05D001671 1.1e-06 57.4 148 31.1
CDE05G0205 Ceratophyllum demersum HOM05D000063 ORTHO05D001671 1.1e-06 57.4 149 31.5
AUR62039523 Chenopodium quinoa HOM05D000063 ORTHO05D001671 1.1e-06 57.4 142 32.4
Gohir.A01G150200 Gossypium hirsutum HOM05D000063 ORTHO05D001671 1.1e-06 57.4 141 31.2
Potri.017G018600 Populus trichocarpa HOM05D000455 ORTHO05D018090 1.1e-06 57.4 138 33.3
TWI53G1653 Tripterygium wilfordii HOM05D000063 ORTHO05D001671 1.1e-06 57.4 136 31.6
CSS0043454 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D001671 1.4e-06 57.0 142 30.3
CANSAT01G1102 Cannabis sativa HOM05D000063 ORTHO05D001671 1.4e-06 57.0 142 30.3
MELO3C005298.2 Cucumis melo HOM05D000063 ORTHO05D001671 1.4e-06 57.0 141 31.9
CsaV3_5G028350 Cucumis sativus L. HOM05D000063 ORTHO05D001671 1.4e-06 57.0 141 31.9
Duzib133G0212 Durio zibethinus HOM05D000063 ORTHO05D001671 1.4e-06 57.0 135 31.1
Duzib212G0853 Durio zibethinus HOM05D000030 ORTHO05D010590 1.4e-06 57.0 111 35.1
FvH4_4g34110 Fragaria vesca HOM05D000063 ORTHO05D001671 1.4e-06 57.0 151 31.1
FAN12G4094 Fragaria x ananassa HOM05D000063 ORTHO05D001671 1.4e-06 57.0 151 31.1
FAN17G2545 Fragaria x ananassa HOM05D000063 ORTHO05D001671 1.4e-06 57.0 151 31.1
FAN22G0355 Fragaria x ananassa HOM05D000063 ORTHO05D001671 1.4e-06 57.0 151 31.1
Glyma.11G216500 Glycine max HOM05D000063 ORTHO05D001671 1.4e-06 57.0 140 32.1
Glyma.18G040000 Glycine max HOM05D000063 ORTHO05D001671 1.4e-06 57.0 140 32.1
Phvul.001G230500 Phaseolus vulgaris HOM05D000063 ORTHO05D001671 1.4e-06 57.0 142 31.7
Potri.008G131700 Populus trichocarpa HOM05D000063 ORTHO05D001671 1.4e-06 57.0 142 31.7
Potri.010G110700 Populus trichocarpa HOM05D000063 ORTHO05D001671 1.4e-06 57.0 142 31.7
Sabra16G0031800 Salix brachista HOM05D000030 ORTHO05D000009 1.4e-06 57.0 143 31.5
Aqoxy3G04100 Aquilegia oxysepala HOM05D000063 ORTHO05D001671 1.8e-06 56.6 136 31.6
DCAR_030236 Daucus carota HOM05D000063 ORTHO05D001671 1.8e-06 56.6 140 31.4
Glyma.05G140400 Glycine max HOM05D000063 ORTHO05D001671 1.8e-06 56.6 147 32.0
Phvul.003G291500 Phaseolus vulgaris HOM05D000063 ORTHO05D001671 1.8e-06 56.6 151 32.5
TAR374G1383 Trochodendron aralioides HOM05D000063 ORTHO05D001671 1.8e-06 56.6 150 30.0
VMungo1383G2863 Vigna mungo HOM05D000063 ORTHO05D001671 1.8e-06 56.6 142 31.7
BraA02t06421Z Brassica rapa HOM05D000063 ORTHO05D001671 2.4e-06 56.2 134 32.8
Dinv19029 Davidia involucrata HOM05D000063 ORTHO05D001671 2.4e-06 56.2 136 31.6
FAN07G1003 Fragaria x ananassa HOM05D000063 ORTHO05D001671 2.4e-06 56.2 151 31.1
Lj6g0011980 Lotus japonicus HOM05D000063 ORTHO05D001671 2.4e-06 56.2 155 31.6
CDE05G3464 Ceratophyllum demersum HOM05D000063 ORTHO05D001671 3.1e-06 55.8 149 31.5
Glyma.08G095800 Glycine max HOM05D000063 ORTHO05D001671 3.1e-06 55.8 147 32.0
HanXRQChr17g0566801 Helianthus annuus HOM05D000063 ORTHO05D001671 3.1e-06 55.8 143 29.4
Lj4g0007832 Lotus japonicus HOM05D000063 ORTHO05D001671 3.1e-06 55.8 152 32.2
Peaxi162Scf00305g00129 Petunia axillaris HOM05D000063 ORTHO05D001671 3.1e-06 55.8 152 28.9
Prupe.3G162500 Prunus persica HOM05D000063 ORTHO05D001671 3.1e-06 55.8 134 31.3
RcHm_v2.0_Chr4g0443621 Rosa chinensis HOM05D000063 ORTHO05D001671 3.1e-06 55.8 151 30.5
EL10Ac6g14186 Beta vulgaris HOM05D000063 ORTHO05D001671 4.0e-06 55.5 139 30.9
Cc11_g08290 Coffea canephora HOM05D000063 ORTHO05D001671 4.0e-06 55.5 145 30.3
Dinv18612 Davidia involucrata HOM05D000063 ORTHO05D001671 4.0e-06 55.5 141 30.5
Dinv26228 Davidia involucrata HOM05D000063 ORTHO05D001671 4.0e-06 55.5 141 30.5
MBI19_g16173_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D001671 4.0e-06 55.5 135 31.1
Oeu014052.2 Olea europaea HOM05D000063 ORTHO05D001671 4.0e-06 55.5 142 31.0
PGR042G0080 Punica granatum HOM05D000063 ORTHO05D001671 4.0e-06 55.5 143 32.2
Sabra10G0080900 Salix brachista HOM05D000063 ORTHO05D001671 4.0e-06 55.5 142 30.3
TAR629G2987 Trochodendron aralioides HOM05D000063 ORTHO05D001671 4.0e-06 55.5 136 30.9
VMungo0251G3062 Vigna mungo HOM05D000063 ORTHO05D001671 4.0e-06 55.5 152 32.9
Actinidia35732 Actinidia chinensis HOM05D000063 ORTHO05D001671 5.3e-06 55.1 136 30.9
Carub.0005s0051 Capsella rubella HOM05D000063 ORTHO05D001671 5.3e-06 55.1 148 31.1
THA.LOC104822321 Tarenaya hassleriana HOM05D000063 ORTHO05D001671 5.3e-06 55.1 133 31.6
Atru.chr1.1886 Acer truncatum HOM05D000063 ORTHO05D001671 6.9e-06 54.7 139 33.1
A02p13630 Brassica napus HOM05D000063 ORTHO05D001671 6.9e-06 54.7 134 32.8
Ciclev10011367m.g Citrus clementina HOM05D000063 ORTHO05D001671 6.9e-06 54.7 136 30.9
COL.COLO4_15751 Corchorus olitorius HOM05D000063 ORTHO05D001671 6.9e-06 54.7 136 30.9
Migut.E00445 Erythranthe guttata HOM05D000063 ORTHO05D001671 6.9e-06 54.7 148 30.4
Sabra08G0100500 Salix brachista HOM05D000063 ORTHO05D001671 6.9e-06 54.7 142 31.0
SalBow8G1576 Salvia bowleyana HOM05D000063 ORTHO05D001671 6.9e-06 54.7 142 31.7
BcaC03g14745 Brassica carinata HOM05D000063 ORTHO05D001671 9.0e-06 54.3 134 32.8
COL.COLO4_10534 Corchorus olitorius HOM05D000030 ORTHO05D010590 9.0e-06 54.3 98 35.7
Lj4P265T48 Lonicera japonica HOM05D000063 ORTHO05D001671 9.0e-06 54.3 136 30.1
RcHm_v2.0_Chr3g0493011 Rosa chinensis HOM05D000063 ORTHO05D001671 9.0e-06 54.3 135 31.9


User provided reference genes

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