Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 0.0e+00 1086.6 549 100.0
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 3.5e-300 1034.2 548 95.4
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 2.0e-255 885.6 554 84.5
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 2.3e-251 872.1 602 77.9
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 1.7e-225 786.2 553 74.0
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 7.4e-218 760.8 549 72.3
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 1.4e-216 756.5 548 72.3
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 8.0e-212 740.7 553 72.0
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.0e-211 738.8 553 71.8
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 5.2e-211 738.0 551 70.2
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.1e-210 736.9 553 71.2
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 1.6e-207 726.5 528 71.2
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 5.0e-206 721.5 559 68.7
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 6.5e-206 721.1 552 68.1
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 3.0e-203 712.2 556 68.5
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 2.0e-199 699.5 547 68.4
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 1.7e-198 696.4 561 66.8
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 5.0e-198 694.9 547 66.9
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.0e-194 682.9 554 66.4
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 7.5e-194 681.0 540 67.6
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 9.1e-192 674.1 558 65.8
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 2.0e-191 672.9 465 72.7
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 5.9e-191 671.4 559 65.1
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 1.1e-189 667.2 553 66.0
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.5e-189 666.0 442 75.1
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.1e-188 662.9 548 64.4
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 4.7e-188 661.8 563 63.6
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 4.0e-187 658.7 562 63.5
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 6.8e-187 657.9 553 64.9
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 8.9e-187 657.5 558 63.3
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.5e-186 656.8 548 63.7
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 2.0e-186 656.4 540 64.3
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 2.6e-186 656.0 561 64.3
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 2.8e-185 652.5 558 64.5
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.8e-184 649.8 552 61.6
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 3.1e-184 649.0 435 74.7
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 4.5e-183 645.2 518 65.8
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 7.8e-183 644.4 538 63.9
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 4.3e-181 638.6 553 63.1
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 9.5e-181 637.5 466 70.4
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 2.8e-180 636.0 466 70.6
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 2.8e-180 636.0 465 71.4
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.0e-179 634.0 546 63.2
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 1.2e-178 630.6 465 70.1
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 2.6e-178 629.4 546 63.0
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 2.6e-178 629.4 465 70.1
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 4.4e-178 628.6 545 61.1
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 2.2e-177 626.3 548 61.1
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.2e-177 626.3 529 64.3
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 2.9e-177 625.9 557 59.8
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 2.9e-177 625.9 474 67.7
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 4.9e-177 625.2 560 62.3
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 6.4e-177 624.8 529 64.1
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 8.3e-177 624.4 585 60.7
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 1.1e-176 624.0 549 61.0
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.1e-176 624.0 498 67.1
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 1.9e-176 623.2 545 60.9
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.9e-176 623.2 475 68.6
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 2.4e-176 622.9 452 70.4
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 2.4e-176 622.9 547 63.1
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.2e-176 622.5 578 60.9
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.2e-176 622.5 529 64.1
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.4e-176 621.7 498 66.7
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 7.0e-176 621.3 457 70.2
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.2e-176 620.9 529 64.3
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 4.6e-175 618.6 555 62.7
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 7.8e-175 617.8 569 59.8
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 1.3e-174 617.1 549 60.7
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 5.0e-174 615.1 550 60.0
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 6.6e-174 614.8 482 66.6
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 1.9e-173 613.2 556 59.7
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 3.3e-173 612.5 558 58.4
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 2.1e-172 609.8 557 58.7
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 2.8e-172 609.4 548 59.9
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 2.8e-172 609.4 548 59.9
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 1.1e-171 607.4 548 60.0
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 2.3e-171 606.3 548 59.9
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 4.0e-171 605.5 548 59.9
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 8.9e-171 604.4 548 59.1
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 2.9e-169 599.4 478 63.2
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 8.3e-169 597.8 421 69.1
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.9e-168 596.7 464 64.0
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 9.2e-168 594.3 547 59.2
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 1.6e-167 593.6 557 56.7
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 3.5e-167 592.4 476 64.7
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.3e-166 590.5 517 62.1
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.1e-165 587.4 553 57.7
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.4e-161 571.6 460 64.8
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 2.4e-160 569.7 561 57.9
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 4.1e-160 568.9 538 56.9
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 5.4e-160 568.5 533 58.0
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 9.2e-160 567.8 425 66.8
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 6.2e-156 555.1 560 55.2
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 8.1e-156 554.7 407 66.8
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 1.1e-152 544.3 674 49.7
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 4.3e-149 532.3 553 55.5
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 1.8e-147 526.9 550 55.8
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 3.1e-147 526.2 569 56.1
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 4.9e-145 518.8 573 53.9
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 3.2e-144 516.2 505 55.6
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 2.7e-143 513.1 387 70.0
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 4.6e-143 512.3 329 78.7
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.1e-139 501.1 408 63.2
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 9.0e-139 498.0 460 59.1
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 5.4e-136 488.8 360 70.6
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 7.1e-136 488.4 485 54.0
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 2.7e-135 486.5 506 52.8
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 2.5e-112 410.2 434 53.9
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 8.8e-110 401.7 544 46.0
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 3.3e-109 399.8 329 65.3
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 3.4e-106 389.8 460 49.3
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 7.4e-101 372.1 374 53.2
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 4.7e-95 352.8 284 61.3
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 3.7e-92 343.2 259 67.2
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.7e-73 281.2 237 63.7
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 6.3e-68 262.7 358 43.3
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.7e-66 257.3 284 48.6
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 4.6e-66 256.5 443 39.1
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 2.5e-56 224.2 549 30.4
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.9e-48 198.0 247 49.8
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 5.4e-35 153.3 232 44.0
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 1.0e-33 149.1 205 36.1
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 6.6e-33 146.4 206 41.7
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.7e-33 146.0 95 73.7
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 3.4e-29 134.0 173 46.2
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 2.3e-25 121.3 80 72.5
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 4.3e-24 117.1 62 85.5
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 7.9e-18 96.3 155 50.3
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 3.0e-17 94.4 83 59.0
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 2.8e-07 61.2 49 63.3


User provided reference genes

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