Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 2.0e-103 379.0 181 100.0
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 7.4e-66 254.2 176 71.6
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 4.0e-59 231.9 177 68.9
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 1.5e-34 150.2 170 51.8
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 2.6e-34 149.4 170 51.8
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 3.7e-33 145.6 178 48.3
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 5.4e-32 141.7 167 47.3
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 1.9e-29 133.3 175 48.0
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 2.8e-28 129.4 174 44.8
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 6.2e-28 128.3 167 48.5
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 2.3e-27 126.3 171 44.4
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 4.0e-27 125.6 166 49.4
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 2.9e-25 119.4 169 46.7
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 6.4e-25 118.2 170 42.4
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 8.3e-25 117.9 171 42.1
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 1.1e-24 117.5 176 39.8
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 1.4e-24 117.1 167 42.5
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 3.2e-24 115.9 151 48.3
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 5.4e-24 115.2 177 40.7
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.7e-23 112.8 163 41.1
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.7e-23 112.8 163 41.1
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 7.8e-23 111.3 178 42.7
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 2.3e-22 109.8 176 39.8
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 1.9e-21 106.7 193 40.4
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 1.9e-21 106.7 203 36.9
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 2.5e-21 106.3 210 39.0
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 5.6e-21 105.1 172 39.5
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 7.3e-21 104.8 165 43.0
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 7.3e-21 104.8 171 40.9
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 9.5e-21 104.4 156 42.9
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 2.1e-20 103.2 179 37.4
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 4.7e-20 102.1 189 36.5
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 4.7e-20 102.1 179 39.7
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 8.1e-20 101.3 171 39.8
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 1.1e-19 100.9 178 38.8
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.1e-19 100.9 189 35.4
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 3.1e-19 99.4 166 39.8
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 3.1e-19 99.4 179 38.5
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 5.2e-19 98.6 180 37.2
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 2.0e-18 96.7 175 38.3
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 5.8e-18 95.1 166 36.1
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 9.9e-18 94.4 152 38.2
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 1.7e-17 93.6 114 50.9
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 1.7e-17 93.6 205 33.2
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 2.2e-17 93.2 177 38.4
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 2.9e-17 92.8 165 36.4
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 8.3e-17 91.3 169 36.7
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 5.4e-16 88.6 141 39.0
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 7.1e-16 88.2 165 33.9
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 7.1e-16 88.2 158 39.9
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 1.6e-15 87.0 174 37.4
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 2.1e-15 86.7 156 37.2
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 4.6e-15 85.5 169 36.7
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 6.0e-15 85.1 128 39.8
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 6.0e-15 85.1 150 37.3
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 7.8e-15 84.7 111 41.4
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 7.8e-15 84.7 165 33.9
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.3e-14 84.0 159 42.8
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 1.3e-14 84.0 159 42.8
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.7e-14 83.6 124 42.7
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 2.3e-14 83.2 173 33.5
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 5.1e-14 82.0 118 42.4
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 6.6e-14 81.6 168 34.5
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.9e-13 80.1 159 41.5
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 4.3e-13 79.0 167 37.1
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 5.6e-13 78.6 148 37.2
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 9.6e-13 77.8 165 33.9
COL.COLO4_13422 Corchorus olitorius HOM05D009275 ORTHO05D009180 3.6e-12 75.9 180 33.9
PGR004G2766 Punica granatum HOM05D009275 ORTHO05D009180 6.2e-12 75.1 208 29.3
Thhalv10027910m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 1.2e-10 70.9 166 34.3
BcaB06g27100 Brassica carinata HOM05D009275 ORTHO05D009180 1.5e-10 70.5 165 32.7
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 2.6e-10 69.7 114 43.0
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 3.4e-10 69.3 59 55.9
Carub.0007s3272 Capsella rubella HOM05D009275 ORTHO05D009180 4.4e-10 68.9 164 33.5
CARHR215350 Cardamine hirsuta HOM05D009275 ORTHO05D009180 4.4e-10 68.9 173 32.4
Aa31LG9G17500 Aethionema arabicum HOM05D009275 ORTHO05D009180 1.3e-09 67.4 167 32.3
AL7G46310 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 2.2e-09 66.6 164 32.9
Lsat_1_v5_gn_8_114880 Lactuca sativa HOM05D008015 ORTHO05D009180 2.9e-09 66.2 174 32.2
Sp7g04570 Schrenkiella parvula HOM05D009275 ORTHO05D009180 3.8e-09 65.9 98 44.9
arahy.Tifrunner.gnm1.ann1.NRE7W4 Arachis hypogaea HOM05D009275 ORTHO05D009180 6.4e-09 65.1 171 33.3
BcaC02g09585 Brassica carinata HOM05D009275 ORTHO05D009180 6.4e-09 65.1 165 31.5
C04p44430 Brassica napus HOM05D009275 ORTHO05D009180 6.4e-09 65.1 165 31.5
BolC4t26014H Brassica oleracea HOM05D009275 ORTHO05D009180 6.4e-09 65.1 165 31.5
CARHR292200 Cardamine hirsuta HOM05D009275 ORTHO05D009180 6.4e-09 65.1 163 32.5
BraA04t16736Z Brassica rapa HOM05D009275 ORTHO05D009180 1.1e-08 64.3 92 41.3
AT5G37550 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 1.9e-08 63.5 92 43.5
SEGI_26939 Sequoiadendron giganteum HOM05D040355 ORTHO05D037586 1.9e-08 63.5 136 33.1
A04p10720 Brassica napus HOM05D009275 ORTHO05D009180 2.4e-08 63.2 92 41.3
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 4.2e-08 62.4 138 33.3
arahy.Tifrunner.gnm1.ann1.I66ZQ3 Arachis hypogaea HOM05D009275 ORTHO05D009180 4.2e-08 62.4 176 33.0
AL2G23880 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 5.4e-08 62.0 144 32.6
Aa31LG2G2900 Aethionema arabicum HOM05D009275 ORTHO05D009180 7.1e-08 61.6 188 30.9
THA.LOC104822277 Tarenaya hassleriana HOM05D009275 ORTHO05D009180 2.1e-07 60.1 153 31.4
unitig_32.g11793 Utricularia gibba HOM05D008015 ORTHO05D009180 2.7e-07 59.7 105 36.2
Thhalv10019019m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 4.6e-07 58.9 142 33.1
AT1G66190 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 1.0e-06 57.8 122 35.2
BcaB05g24157 Brassica carinata HOM05D009275 ORTHO05D009180 1.0e-06 57.8 122 35.2
Sp5g21250 Schrenkiella parvula HOM05D009275 ORTHO05D009180 1.3e-06 57.4 109 38.5
Carub.0002s1218 Capsella rubella HOM05D009275 ORTHO05D009180 1.7e-06 57.0 172 30.8
BraA02t06410Z Brassica rapa HOM05D009275 ORTHO05D009180 3.0e-06 56.2 122 34.4
A02p13520 Brassica napus HOM05D009275 ORTHO05D009180 5.1e-06 55.5 122 34.4
C02p21840 Brassica napus HOM05D009275 ORTHO05D009180 8.7e-06 54.7 122 34.4
BolC2t08316H Brassica oleracea HOM05D009275 ORTHO05D009180 8.7e-06 54.7 122 34.4


User provided reference genes

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