Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 3.6e-242 841.3 461 100.0
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 4.8e-218 761.1 470 91.1
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 8.0e-181 637.5 461 78.7
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.0e-175 620.5 461 76.6
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 2.9e-167 592.4 461 74.0
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 3.8e-167 592.0 459 72.3
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 1.4e-161 573.5 455 73.4
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 1.2e-160 570.5 458 72.9
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 5.9e-160 568.2 463 72.4
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 1.3e-159 567.0 459 71.9
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 1.3e-159 567.0 468 70.3
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 4.3e-158 562.0 463 72.6
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 9.5e-158 560.8 460 70.7
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 1.8e-156 556.6 451 72.3
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 1.7e-154 550.1 460 69.6
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 3.2e-153 545.8 459 69.7
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 9.2e-153 544.3 458 69.0
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 3.9e-151 538.9 460 69.3
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 8.6e-151 537.7 458 69.9
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.1e-149 533.1 455 69.5
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 3.1e-148 529.3 455 69.2
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.2e-147 527.3 460 68.0
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 2.0e-147 526.6 460 67.8
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.0e-147 526.6 460 67.6
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.0e-147 526.6 460 67.8
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 5.8e-147 525.0 460 67.6
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 5.8e-147 525.0 455 68.8
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 8.3e-146 521.2 458 68.1
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 8.6e-143 511.1 456 66.0
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 7.3e-142 508.1 459 67.1
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.4e-140 503.8 393 73.8
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 3.1e-140 502.7 460 66.5
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 5.8e-139 498.4 495 59.8
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 9.8e-139 497.7 459 64.9
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 1.1e-137 494.2 456 63.8
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 2.7e-136 489.6 458 66.2
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 1.3e-135 487.3 505 59.8
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.1e-134 484.2 449 63.9
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 3.3e-134 482.6 462 63.2
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 1.2e-133 480.7 467 63.0
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 2.1e-133 479.9 427 66.3
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 2.8e-133 479.6 458 63.5
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 6.2e-133 478.4 434 66.6
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 8.1e-133 478.0 459 61.7
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 3.1e-132 476.1 459 62.5
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.2e-131 474.2 437 66.4
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.5e-131 473.8 449 62.6
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 2.0e-131 473.4 456 62.7
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 4.4e-131 472.2 459 62.7
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 1.7e-130 470.3 432 64.8
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 5.4e-129 465.3 344 76.5
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 9.2e-129 464.5 448 63.2
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 6.0e-128 461.8 447 63.3
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 7.8e-128 461.5 460 63.3
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.0e-127 461.1 435 65.1
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 1.3e-127 460.7 434 65.4
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 6.6e-127 458.4 435 64.8
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 6.6e-127 458.4 438 65.3
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 1.5e-126 457.2 438 65.5
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 5.6e-126 455.3 421 66.7
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 9.6e-126 454.5 438 65.1
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 2.8e-125 453.0 437 62.9
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 4.0e-124 449.1 450 64.0
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 4.0e-124 449.1 458 62.4
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 5.2e-124 448.7 453 58.3
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 6.9e-124 448.4 421 66.3
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 3.4e-123 446.0 454 63.4
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 6.4e-122 441.8 455 63.3
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 5.4e-121 438.7 406 67.5
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 2.1e-120 436.8 444 64.6
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.0e-119 434.5 453 63.8
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 8.7e-119 431.4 439 62.0
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.9e-118 430.3 445 60.0
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 2.5e-118 429.9 434 61.3
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 3.3e-118 429.5 454 63.4
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 1.3e-117 427.6 461 62.7
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 4.8e-117 425.6 453 62.3
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 8.1e-117 424.9 458 61.6
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 8.1e-117 424.9 461 61.6
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 5.3e-116 422.2 456 62.1
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 5.3e-116 422.2 456 62.1
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 6.9e-116 421.8 456 61.6
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 1.2e-115 421.0 454 62.1
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 1.2e-115 421.0 454 62.1
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 1.5e-115 420.6 386 67.6
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 2.9e-114 416.4 432 63.9
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 4.2e-113 412.5 430 60.5
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 2.7e-112 409.8 403 63.3
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 7.9e-112 408.3 432 62.7
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 1.0e-111 407.9 382 64.4
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 3.9e-111 406.0 300 70.3
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 2.2e-106 390.2 395 61.8
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 4.9e-106 389.0 392 62.0
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 6.4e-106 388.7 458 56.3
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 6.4e-106 388.7 261 77.4
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 8.4e-106 388.3 441 57.6
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 1.6e-101 374.0 329 69.6
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.4e-100 370.9 430 57.0
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 5.8e-99 365.5 450 55.3
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 1.4e-97 360.9 395 58.2
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 1.6e-96 357.5 442 55.9
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 1.5e-94 350.9 380 61.6
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 9.6e-94 348.2 252 71.4
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.4e-79 301.2 203 77.8
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 1.3e-77 294.7 276 68.1
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 5.9e-75 285.8 230 68.3
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 3.8e-74 283.1 455 42.2
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 6.1e-72 275.8 348 54.3
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.5e-70 271.2 326 55.2
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 4.1e-60 236.5 238 67.2
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.8e-55 221.1 307 47.9
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 2.3e-55 220.7 335 45.1
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 2.2e-53 214.2 251 46.2
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.8e-53 213.0 298 49.7
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.0e-50 205.3 134 81.3
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.2e-49 200.3 255 44.7
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 2.8e-40 170.6 123 70.7
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 6.1e-40 169.5 248 40.7
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 9.2e-36 155.6 211 42.2
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 2.0e-30 137.9 77 90.9
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 7.0e-28 129.4 159 55.3
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 2.1e-19 101.3 60 83.3
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 3.4e-14 84.0 171 34.5
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.7e-13 81.6 166 37.3
FAN28G0752 Fragaria x ananassa HOM05D006243 ORTHO05D007688 9.2e-12 75.9 112 42.0


User provided reference genes

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